Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01277 | ATGGCTGGTGGTAGTGATTTGTTGCCACTCTTGGCTATGGTGGTTGTCCAATTCCTGTATGCAGGCTTGAATATTACATCAAAGTTAGCCATGGAGTTTGGGATGAATCCAATGGTTCTAGTTGCTTACAGGCAGATGTTTGGTACCATAGCCATAGCTCCTTGTGCTTATTGGTTTGAGAGAAAAGGGAGACCCAAGATTACAAAACCTATCCTGTTTCAGATTCTACTGTGTTCCTTAACTGGGGCAACAGGAAATCAAGTGTTTTACTATGTTGGGTTAAAATATTCATCCCCCACCATCGCATGTGCATTGACCAATGTCCTGCCTGCTGCCACTTTTCTCCTCGCTCTTCTTTTCAGACAAGAATCTGTGGGGATCAAGACAACCCCAGGTGCAGCCAAGGTGATTGGGACTGTTGTGTGCGTCGGAGGGGCAATGTTGCTGTCGTTCTACCATGGACAAACCATTGACCTGGGTGAATCTGGGATTCATTGGAAGTATGCCGAGATGATGAGGGGGGAAAGTTCCAGCAGCCAAGGCGGCAGCGCCATCTGGGGCTCTCTCTACTTGATCATAAGCTCTGTTGCTTGGGCGGCTTGGTTTGTAATCCAAGCAAGGGTTAACTCTCAGTTTCCAGCTCCCTACACGAGCACGGCTATCATGACTTTCATGGCAAGCATTCAATGCGGAGCAATCGCCGTTGGCATTGAGCACAACACAGCTGCAGCTTGGTCATTGAAAAGTCCAATCCGCCTTGTTGGTGCTCTCTATGCGGGAGTAGCGTGCTCAGGGGTTGCATTTTGCCTAACCTCCTGGAGTATCCAAAAGAAAGGTCCTCTCTATGCCTCAGTTTTCAGCCCCTTCTTGCTCATTATCGTGGCTATTTTCAGCTGGGCCTTCTTTCAAGAGAAGTTATACGTAGGAACTGTTGTAGGGTCATTGTTGATTGTTGTTGGGCTATATGCTGTCCTATGGGGAAAGACCAAAGAGGTGAAACTACAACAGGTTAATGAAATGGCGGCAGTAGCAGAGGCAAAGCTGGATGAGTGTAATACCAAAGATGACTTGGAAGAACAGTCGTATGTGGTTTCAAATGGAAATATTCTCCATAGGTAA | 1119 | 47.01 | MAGGSDLLPLLAMVVVQFLYAGLNITSKLAMEFGMNPMVLVAYRQMFGTIAIAPCAYWFERKGRPKITKPILFQILLCSLTGATGNQVFYYVGLKYSSPTIACALTNVLPAATFLLALLFRQESVGIKTTPGAAKVIGTVVCVGGAMLLSFYHGQTIDLGESGIHWKYAEMMRGESSSSQGGSAIWGSLYLIISSVAWAAWFVIQARVNSQFPAPYTSTAIMTFMASIQCGAIAVGIEHNTAAAWSLKSPIRLVGALYAGVACSGVAFCLTSWSIQKKGPLYASVFSPFLLIIVAIFSWAFFQEKLYVGTVVGSLLIVVGLYAVLWGKTKEVKLQQVNEMAAVAEAKLDECNTKDDLEEQSYVVSNGNILHR | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8407466 | 8409670 | - | CmoCh11G012770.1 | Cmo11g01277 | 391896 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01277 | 372 | PANTHER | WAT1-RELATED PROTEIN | 5 | 340 | - | - | |
Cmo11g01277 | 372 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 43 | 152 | - | - | |
Cmo11g01277 | 372 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 243 | 329 | - | - | |
Cmo11g01277 | 372 | Coils | Coil | 334 | 354 | - | - | |
Cmo11g01277 | 372 | Pfam | EamA-like transporter family | 186 | 325 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo11g01277 | 372 | Pfam | EamA-like transporter family | 9 | 150 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo11g01277 | 372 | PANTHER | WAT1-RELATED PROTEIN | 5 | 340 | IPR030184 | GO:0016021|GO:0022857 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00962 | Cmo-Chr2:5904866 | Cmo11g01277 | Cmo-Chr11:8407466 | 3.37E-70 | dispersed | |
Cmo04g02086 | Cmo-Chr4:12589069 | Cmo11g01277 | Cmo-Chr11:8407466 | 1.10E-62 | dispersed | |
Cmo05g01072 | Cmo-Chr5:8634436 | Cmo11g01277 | Cmo-Chr11:8407466 | 2.66E-154 | dispersed | |
Cmo11g01277 | Cmo-Chr11:8407466 | Cmo18g00829 | Cmo-Chr18:9683649 | 5.44E-83 | dispersed | |
Cmo15g01397 | Cmo-Chr15:9508894 | Cmo11g01277 | Cmo-Chr11:8407466 | 1.05E-57 | dispersed | |
Cmo11g01277 | Cmo-Chr11:8407466 | Cmo11g01280 | Cmo-Chr11:8485082 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01277 | - | - | csv:101215353 | 645.58 |