Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01280 ATGGCTGGTGGTAGTGATTTGTTGCCACTCTTGGCTATGGTGGTTGTCCAATTCCTGTATGCAGGCTTGAATATTACATCAAAGTTAGCCATGGAGTTTGGGATGAATCCAATGGTTCTAGTTGCTTACAGGCAGATGTTTGGTACCATAGCCATAGCTCCTTGTGCTTATTGGTTTGAGAGAAAAGGGAGACCCAAGATTACAAAACCTATCCTGTTTCAGATTCTACTGTGTTCCTTAACTGGGGCAACAGGAAATCAAGTGTTTTACTATGTTGGGTTAAAATATTCATCCCCCACCATCGCATGTGCATTGACCAATGTCCTGCCTGCTGCCACTTTTCTCCTCGCTCTTCTTTTCAGACAAGAATCTGTGGGGATCAAGACAACCCCAGGTGCAGCCAAGGTGATTGGGACTGTTGTGTGCGTCGGAGGGGCAATGTTGCTGTCGTTCTACCATGGACAAACCATCAACCTGGGTGAATCTGGGATTCATTGGAAGTATGCCGAGATGATGAGGGGGGGAAGTTCCAGCAGCCAAGGCGGCAGCGCCATCTGGGGCTCTCTCTACTTGATCATAAGCTCTGTTGCTTGGGCGGCTTGGTTTGTAATCCAAGCAAGGGTTAACTCTCAGTTTCCAGCTCCCTACACGAGCACGGCTATCATGACTTTCATGGCAAGCATTCAATGCGGAGCAATCGCCGTTGGCATTGAGCACAACACAGCTGCAGCTTGGTCATTGAAAAGTCCAATCCGCCTTGTTGGTGCTCTCTATGCGGGAGTGGCGTGCTCAGGGGTTGCATTTTGCCTAACCTCCTGGAGTATCCAAAAGAAAGGTCCTCTCTATGCCTCAGTTTTCAACCCCTTCTTGCTCATTATCGTGGCTATTTTCAGCTGGACCTTCTTTCAAGAAAAGTTATACGTAGGAACTGTTGTAGGGTCATTGTTGATTGTTGTTGGGCTATATGCTGTCCTATGGGGAAAGACCAAAGAGGTGAAACTACAACAGGTTATTGAAATGGCGGCAGTAGCAGAGGCAAAGCTGGATGAGTGTAATACCAAAGATGACTTGGAAGAACAGTCGTATGTGGCTTCAAATGGAAATATTCTCCATAAGTAA 1119 46.92 MAGGSDLLPLLAMVVVQFLYAGLNITSKLAMEFGMNPMVLVAYRQMFGTIAIAPCAYWFERKGRPKITKPILFQILLCSLTGATGNQVFYYVGLKYSSPTIACALTNVLPAATFLLALLFRQESVGIKTTPGAAKVIGTVVCVGGAMLLSFYHGQTINLGESGIHWKYAEMMRGGSSSSQGGSAIWGSLYLIISSVAWAAWFVIQARVNSQFPAPYTSTAIMTFMASIQCGAIAVGIEHNTAAAWSLKSPIRLVGALYAGVACSGVAFCLTSWSIQKKGPLYASVFNPFLLIIVAIFSWTFFQEKLYVGTVVGSLLIVVGLYAVLWGKTKEVKLQQVIEMAAVAEAKLDECNTKDDLEEQSYVASNGNILHK 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8485082 8487169 + CmoCh11G012800.1 Cmo11g01280 391899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01280 372 PANTHER WAT1-RELATED PROTEIN 5 334 IPR030184 GO:0016021|GO:0022857
Cmo11g01280 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Cmo11g01280 372 PANTHER WAT1-RELATED PROTEIN 5 334 - -
Cmo11g01280 372 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Cmo11g01280 372 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Cmo11g01280 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 329 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g01072 Cmo11g01280 CCT
Cmo05g01072 Cmo11g01280 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01280 Cmo-Chr11:8485082 Cmo18g00829 Cmo-Chr18:9683649 1.88E-82 dispersed
Cmo11g01277 Cmo-Chr11:8407466 Cmo11g01280 Cmo-Chr11:8485082 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01280 - - csv:101215353 636.336