Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01291 | ATGGTTAGCGAAGAAGAAGCTCTAATCCAAAAGGTGGTGGATTTGTATGAGCAAATCTCTGGGCTTGAAAGCCTCAAACCTTGTAAACATGTCGACACTCTGTTCACAGAGTTGGTGGTCACGTGCATGCCACCCACCAGCCCTAATTTCCACATCAATTCACTCTCAAACCCTCTTCAACAAATGAGATCAAATCTGATCCGCCTTTGCGGTCAAGCTGAGTCCCTTTTGGAGTCCCATTTCTCTGATCTCTTAGCCAATTTTGATTACCCTCTTCACCATCTCCATCTCTTCCCTTACTTCTCCAATTATCTCAAGCTTAGCCTCCTTGAATTCTCCATCCTCCGCCGCCACTGCCCCGTCCTCCCCTCCTCCGTCGCCTTCGTCGGCTCCGGCCCTCTTCCTCTCACCTCCATCGTCCTCGCCACCCGCCACCTCCCCTCCACCTCCTTCCACAATTACGATCTCGACCCACTTGCTAATACCCAGGCGTCGAAATTGGTATCGGTGGACTCGGACCTAAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGCTGAAGGAGTACGAGGTTGTGTTTTTGGCAGCTCTAGTAGGAATGGAGAAGGAGGAGAAATTGAGAGTGATAGAGCATTTGTGTGAGTTCATGGCGGAAGGGGCTTGTTTGATGGTGAGAAGTGCTCATGGAGGAAGGGCTTTCCTTTATCCTGTGGTGGAGGAATGTGATTTGGTAGGGTTTGAGGTTCTATCGGTGTTTCATCCGAGTGATGAAGTTATAAACTCGGTGATAATTGCAAGAAAAAAGAAGAAGGATCATGACGATGATGATTGCTTGAAGATTGTTGGTGATGATAATCATGAAAATGGTGTTGTTGTTCATAACAAACAATGTTGTGATCACATTCATGGCTTCAACAATCATGGAGGAATGATTGAGGAGTTAGCTGAGTAG | 969 | 47.37 | MVSEEEALIQKVVDLYEQISGLESLKPCKHVDTLFTELVVTCMPPTSPNFHINSLSNPLQQMRSNLIRLCGQAESLLESHFSDLLANFDYPLHHLHLFPYFSNYLKLSLLEFSILRRHCPVLPSSVAFVGSGPLPLTSIVLATRHLPSTSFHNYDLDPLANTQASKLVSVDSDLKTRMVFHTCDIMKVTEELKEYEVVFLAALVGMEKEEKLRVIEHLCEFMAEGACLMVRSAHGGRAFLYPVVEECDLVGFEVLSVFHPSDEVINSVIIARKKKKDHDDDDCLKIVGDDNHENGVVVHNKQCCDHIHGFNNHGGMIEELAE | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8760626 | 8761998 | + | CmoCh11G012910.1 | Cmo11g01291 | 391910 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01291 | 322 | Gene3D | Vaccinia Virus protein VP39 | 7 | 275 | IPR029063 | - | |
Cmo11g01291 | 322 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 3 | 306 | IPR004298 | GO:0030410|GO:0030418 | |
Cmo11g01291 | 322 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 278 | IPR004298 | GO:0030410|GO:0030418 | |
Cmo11g01291 | 322 | Pfam | Nicotianamine synthase protein | 4 | 276 | IPR004298 | GO:0030410|GO:0030418 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g01085 | Cmo11g01291 | CCT | |
Cmo11g01291 | Cmo12g01034 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00434 | Cmo-Chr10:1981529 | Cmo11g01291 | Cmo-Chr11:8760626 | 1.45E-101 | dispersed | |
Cmo11g01291 | Cmo-Chr11:8760626 | Cmo12g01034 | Cmo-Chr12:9648707 | 1.82E-109 | dispersed | |
Cmo11g01291 | Cmo-Chr11:8760626 | Cmo05g01085 | Cmo-Chr5:8710688 | 1.27E-126 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01291 | K05953 | - | csv:101218907 | 487.648 |