Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01291 ATGGTTAGCGAAGAAGAAGCTCTAATCCAAAAGGTGGTGGATTTGTATGAGCAAATCTCTGGGCTTGAAAGCCTCAAACCTTGTAAACATGTCGACACTCTGTTCACAGAGTTGGTGGTCACGTGCATGCCACCCACCAGCCCTAATTTCCACATCAATTCACTCTCAAACCCTCTTCAACAAATGAGATCAAATCTGATCCGCCTTTGCGGTCAAGCTGAGTCCCTTTTGGAGTCCCATTTCTCTGATCTCTTAGCCAATTTTGATTACCCTCTTCACCATCTCCATCTCTTCCCTTACTTCTCCAATTATCTCAAGCTTAGCCTCCTTGAATTCTCCATCCTCCGCCGCCACTGCCCCGTCCTCCCCTCCTCCGTCGCCTTCGTCGGCTCCGGCCCTCTTCCTCTCACCTCCATCGTCCTCGCCACCCGCCACCTCCCCTCCACCTCCTTCCACAATTACGATCTCGACCCACTTGCTAATACCCAGGCGTCGAAATTGGTATCGGTGGACTCGGACCTAAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGCTGAAGGAGTACGAGGTTGTGTTTTTGGCAGCTCTAGTAGGAATGGAGAAGGAGGAGAAATTGAGAGTGATAGAGCATTTGTGTGAGTTCATGGCGGAAGGGGCTTGTTTGATGGTGAGAAGTGCTCATGGAGGAAGGGCTTTCCTTTATCCTGTGGTGGAGGAATGTGATTTGGTAGGGTTTGAGGTTCTATCGGTGTTTCATCCGAGTGATGAAGTTATAAACTCGGTGATAATTGCAAGAAAAAAGAAGAAGGATCATGACGATGATGATTGCTTGAAGATTGTTGGTGATGATAATCATGAAAATGGTGTTGTTGTTCATAACAAACAATGTTGTGATCACATTCATGGCTTCAACAATCATGGAGGAATGATTGAGGAGTTAGCTGAGTAG 969 47.37 MVSEEEALIQKVVDLYEQISGLESLKPCKHVDTLFTELVVTCMPPTSPNFHINSLSNPLQQMRSNLIRLCGQAESLLESHFSDLLANFDYPLHHLHLFPYFSNYLKLSLLEFSILRRHCPVLPSSVAFVGSGPLPLTSIVLATRHLPSTSFHNYDLDPLANTQASKLVSVDSDLKTRMVFHTCDIMKVTEELKEYEVVFLAALVGMEKEEKLRVIEHLCEFMAEGACLMVRSAHGGRAFLYPVVEECDLVGFEVLSVFHPSDEVINSVIIARKKKKDHDDDDCLKIVGDDNHENGVVVHNKQCCDHIHGFNNHGGMIEELAE 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8760626 8761998 + CmoCh11G012910.1 Cmo11g01291 391910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01291 322 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
Cmo11g01291 322 PANTHER NICOTIANAMINE SYNTHASE 3 3 306 IPR004298 GO:0030410|GO:0030418
Cmo11g01291 322 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Cmo11g01291 322 Pfam Nicotianamine synthase protein 4 276 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g01085 Cmo11g01291 CCT
Cmo11g01291 Cmo12g01034 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00434 Cmo-Chr10:1981529 Cmo11g01291 Cmo-Chr11:8760626 1.45E-101 dispersed
Cmo11g01291 Cmo-Chr11:8760626 Cmo12g01034 Cmo-Chr12:9648707 1.82E-109 dispersed
Cmo11g01291 Cmo-Chr11:8760626 Cmo05g01085 Cmo-Chr5:8710688 1.27E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01291 K05953 - csv:101218907 487.648