Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01307 | ATGACACCCGTTTGGAGCTATGTTCTGTCCAAGTGGCAAACGTTGTCCACTTCTGATCACGCCTCTGTGGTTTCCATTAACTTATTTGTAGCTCTTCTCTGTGCTTGTATTGTGATTGGTCATCTTCTTGAGGAGACCCGGTGGATGAACGAGTCGATCACTGCCCTCTTCATTGGTATGTTTACCGGAGTCATCATTTTACTGGTCAGTGGTGGGAAAAGTTCGCATTTATTGCTCTTCAGCGAAGACATATTCTTCATTTATCTTCTGCCACCTATCATATTCAATGCTGGGTTTCAGGTGAAAAAGAAGCAATTCTTTGTTAACTTCATTACAATTATGCTGTTTGGAGCAATTGGAGCTTTTCAGATCTTTCAGAGAATGGATGTTGGAACACTGGATATTGCCGATATTTTAGCAATTGGAGCTATATTTGCAGCTACAGATTCTGTATGCACATTGCAGATATTAAACCAGGATGAAACACCTCTACTTTACAGTCTAGTATTTGGGGAGGGTGTAGTGAATGATGCTACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTAGACCTCAGTAAAGTTGATGCAAGAGTTGCTTTGCATTTTATCGGGAGCTTCTTTTATTTGTTTTCAACGAGCACTCTACTCGGAGTGTTTGTTGGGCTGCTGAGTGCTTATACAATCAAAAAGTTATATTTTGGCAGGCACTCGACAGATCGTGAGGTTGCTCTAATGATGCTCATGGCATACCTTTCATATATGCTGGCTGAATTATTAGATTTGAGTGGCATTCTCACAGTGTTCTTTTGTGGAATTGTAATGTCACACTATACATGGCATAATGTGACTGAGAGTTCAAGAGTTACCACTAAGCATGCTTTTGCTACCTTATCCTTCATTTCAGAGACGTTTATCTTCGTTTATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAGCTATGTTAGTGATAGTCCAGGGACATCTGTTGCTGTGAGTGCAATATTACTAGCTCTGGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTTTATCCAACTTAGTTAAAAAATCGGCTTCCGAGAAAATTACCTTCAGGCAACAAGTTATAATCTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCTATTGCTCTTGCTTATCATCAGGTGTTTGGGATATTGACCAAGCCTCTTATAAATTGTTTGGTACCTCACCCCAAAGACACCACCAGCTCCAGCATGCTATCGGAACCAGCGGCTCCAAAATCATTCTCGGTACCGCTACTCGGAAGTGCACAGGATTCGGAGGTGGATCTTGATAGTCCCAATATTCCTCGTCCAAGCAGTATCCGTGCACTCCTTGCGACTCCTACGCATACTGTTCATCGCTACTGGCGAAAATTTGATGATGCCTTCATGCGTCCAATGTTCGGGGGGCGGGGTTTTGTCCCCTTTGTTCCAGGATCGCCAACAGAAAGGGCAGCAGACAAGGGTTGGTGGCGTATTCACGTGTTTGCCAGGAATGGCATGGCGCCCGCCGAGCAGGTTGGAATGTGTCGATACTCTCTTGCCTACTGTTTTTTGCCCTCTTGTTTTTGGTAG | 1614 | 43.56 | MTPVWSYVLSKWQTLSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALFIGMFTGVIILLVSGGKSSHLLLFSEDIFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIGAFQIFQRMDVGTLDIADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDLSKVDARVALHFIGSFFYLFSTSTLLGVFVGLLSAYTIKKLYFGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSYVSDSPGTSVAVSAILLALVMVGRAAFVFPLSFLSNLVKKSASEKITFRQQVIIWWAGLMRGAVSIALAYHQVFGILTKPLINCLVPHPKDTTSSSMLSEPAAPKSFSVPLLGSAQDSEVDLDSPNIPRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERAADKGWWRIHVFARNGMAPAEQVGMCRYSLAYCFLPSCFW | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8965531 | 8970782 | + | CmoCh11G013070.1 | Cmo11g01307 | 391926 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01307 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 393 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cmo11g01307 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 394 | 501 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cmo11g01307 | 537 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo11g01307 | 537 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo11g01307 | 537 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo11g01307 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 394 | 501 | - | - | |
Cmo11g01307 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 393 | - | - | |
Cmo11g01307 | 537 | Pfam | Sodium/hydrogen exchanger family | 29 | 391 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cmo11g01307 | 537 | Gene3D | - | 134 | 186 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01147 | Cmo-Chr1:9406608 | Cmo11g01307 | Cmo-Chr11:8965531 | 0 | dispersed | |
Cmo10g01169 | Cmo-Chr10:10438999 | Cmo11g01307 | Cmo-Chr11:8965531 | 0 | dispersed | |
Cmo11g01307 | Cmo-Chr11:8965531 | Cmo17g01105 | Cmo-Chr17:9077906 | 0 | dispersed | |
Cmo11g01307 | Cmo-Chr11:8965531 | Cmo08g01176 | Cmo-Chr8:7482903 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01307 | - | - | csv:101214934 | 845.499 |