Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01337 ATGGCGATGCCCCGAGTCATTGCTTTCGTGTGGTTGCTGCTGTCGCTTTTGGGTATAGCTTGTGATGCCCAACTTTCCTCTACTTTCTACGATCAAACTTGTCCTACTGCCCTCACTACTATTCGAACGGTTATTAGGCAAGCAGTTTCTCAAGAGCGTCGAATGGCCGCCTCTCTCATTCGCCTCCATTTTCATGACTGCTTCGTTCAAGGTTGTGATGCATCCATATTGCTCGATGATACACCCTCTATGATAGGCGAACAAAACGCAGCGCCTAACAGAAACTCTGCAAGAGGATATGGAGTGATACACAAAGCTAAGACTGAAGTTGAGAAGTCATGTCCTGGTGTTGTATCTTGTGCAGATATCCTTGCTGTGGCCGCAAGAGATGCTTCTTTTTCTGTCGGTGGTCCATCTTGGACGGTAAAGCTTGGGAGAAGAGATTCTACTACTGCAAGCAAAACTCTAGCCGAAAGCGAGCTTCCACACTTTCAAGAAAGCCTCGATAGACTTATCTCAATTTTCTCAAACAAAGGACTTAGTGCAAGAGATATGGTAGCACTTTCAGGCTCTCACACCATAGGACAAGCTCAATGCTTTCTTTTCCGCAACAGGATACATAACCAAACTAATATTGACACGGGATTTGCTAGCACTCGTCGTAGAACTTGCCCCACATCTGGAGGGGATGAAAAATTAGCTCCACTTGATTTAGTTACACCAAATTCTTTTGACAATAACTACTTCAAGAATCTTATACAAAAGAAGGGATTGCTTGAAACAGATCAAGCACTCTTTAATGGAGGATCGACAGACAGTATTGTGACGGATTACAGTAAGAATCCAACCGCATTCAAATCGGACTTTGCTACTGCAATGATTAAAATGGGAGACATTGAACCTCTCACCGGTTTAGAAGGGCAAATAAGAAATATTTGTGGTGCAGTCAACTAA 954 43.5 MAMPRVIAFVWLLLSLLGIACDAQLSSTFYDQTCPTALTTIRTVIRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNRNSARGYGVIHKAKTEVEKSCPGVVSCADILAVAARDASFSVGGPSWTVKLGRRDSTTASKTLAESELPHFQESLDRLISIFSNKGLSARDMVALSGSHTIGQAQCFLFRNRIHNQTNIDTGFASTRRRTCPTSGGDEKLAPLDLVTPNSFDNNYFKNLIQKKGLLETDQALFNGGSTDSIVTDYSKNPTAFKSDFATAMIKMGDIEPLTGLEGQIRNICGAVN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9258069 9259185 + CmoCh11G013370.1 Cmo11g01337 391956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01337 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PANTHER PEROXIDASE 72-RELATED 7 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 Pfam Peroxidase 42 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 Gene3D - 28 317 - -
Cmo11g01337 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601|GO:0042744
Cmo11g01337 317 PANTHER PEROXIDASE 7 316 - -
Cmo11g01337 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cmo11g01337 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cmo11g01337 317 Gene3D Peroxidase, domain 2 162 296 - -
Cmo11g01337 317 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Cmo11g01337 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01337 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02060 Cmo-Chr4:11623246 Cmo11g01337 Cmo-Chr11:9258069 0 dispersed
Cmo04g02061 Cmo-Chr4:11651445 Cmo11g01337 Cmo-Chr11:9258069 3.57E-07 dispersed
Cmo04g02062 Cmo-Chr4:11653293 Cmo11g01337 Cmo-Chr11:9258069 2.70E-12 dispersed
Cmo11g01337 Cmo-Chr11:9258069 Cmo15g00169 Cmo-Chr15:782241 8.41E-136 dispersed
Cmo11g01337 Cmo-Chr11:9258069 Cmo11g01338 Cmo-Chr11:9259436 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01337 K00430 - csv:116403994 553.132