Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01360 ATGGACTCGATATGGAGCCACACTGGCGCGCCAGACGCCTTGCATTTTGTCATCGCCGTCCAGTTCGCCTTCGGCTTTTACGCTGCGAGGTTCCTACTCGACAGATTCATTTTTCGTAGGTTCGCAATTTGGCTGTTGAGCAAAGGAGCTGCTCCGCTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGTACTGTTGAAATATGCATTTTAAAAATTGCATATAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAGCTTCCTCTAAAACTATTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATTGCTGCTCTTCTTATATGGGAGACTCGGAGAAAGGACTTCTCTGTCATGATGTCTCATCATGTAATTACTGTTATCTTGATCGGATATTCATATATGACGAGATTTTTCCAGATTGGATCGGTTATTCTTGCCCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAAAAAGAACTCGGAGCAAGTGTTTTCTTTGGATTTTTTGCTGTTACATGGCTCGTATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAAATCAACAAGCTATGATCTCTGTGAGTACTTGAAGCTATCAGATGCGAATTCCAGATTGATATACTATGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTGCTCATATGCTCCATGATCCATAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGATTCGGAGGATGACGATTAG 867 40.83 MDSIWSHTGAPDALHFVIAVQFAFGFYAARFLLDRFIFRRFAIWLLSKGAAPLKLDEATQSKVVKCSESMWKLAYYGTVEICILKIAYNEPWFRDSNQYFKGWPNQELQLPLKLFYMCQCGFYLYSIAALLIWETRRKDFSVMMSHHVITVILIGYSYMTRFFQIGSVILALHDASDVFMEAAKVFKYSEKELGASVFFGFFAVTWLVLRLIFFPFWVIKSTSYDLCEYLKLSDANSRLIYYVFNTMLLMLLVFHIYWWLLICSMIHRQLKNRGKVGEDIRSDSEDDD 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9461604 9467868 - CmoCh11G013600.1 Cmo11g01360 391979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01360 288 Pfam TLC domain 65 263 IPR006634 GO:0016021
Cmo11g01360 288 PIRSF LAG1_LAC1 11 288 IPR016439 GO:0046513|GO:0050291
Cmo11g01360 288 SMART lag1_27 64 271 IPR006634 GO:0016021
Cmo11g01360 288 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 9 285 IPR016439 GO:0046513|GO:0050291
Cmo11g01360 288 PANTHER BNAA01G26210D PROTEIN 9 285 - -
Cmo11g01360 288 ProSiteProfiles TLC domain profile. 64 271 IPR006634 GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01360 Cmo19g00623 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02291 Cmo-Chr4:17039195 Cmo11g01360 Cmo-Chr11:9461604 1.19E-84 dispersed
Cmo11g01360 Cmo-Chr11:9461604 Cmo15g00872 Cmo-Chr15:4427651 2.11E-83 dispersed
Cmo11g01360 Cmo-Chr11:9461604 Cmo19g00623 Cmo-Chr19:6822808 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01360 - - csv:101205881 547.354