Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01361 ATGGAGATTCTCTCTTTCACTCTGTATTTAATAATATTCTTCATTTCTTCTGCTTTTTTGCTTTATTTCAAGAGAAATGAAACCCCAAAACCCAGAAAATCTCTTAGGCTTCCTCCTGGTTCCATGGGATTGCCATGGATTGGAGAAACTTTGCAGCTTTATTCTCAAGATCCCAACATATTTTTCTCCGAAAAACAGAGAAGATATGGAGAAATTTTTAAAACCAACATTTTGGGATGTCCTTGTGTCATGTTGGCCAGCGCCGCCGCAGCCCGGTTCGTTTTGGTAACTAATGCTCATTTATTCCGACCGACTTACCCCAAAAGCAAAGAGACAATGATCGGTCCGGCGGCGCTTTTCTTCCACCAGGGAAATTACCATTCTAACATTCGGAAACTTGTTCAAAATTCTCTCTGTCTCGGAAGCCTCAGAAACCTTGTTCCTCATATTGAAACCGCCGCCATTTCCGCCGCCGAATCATGGGCTGCCGCCGGCCACGTCATCAACACCTTCCTCGAAATGAAAAAGTTTTCTTTCGATGTGGGAATTCTAGCAGTGTTTGGGAAGCTAGAAAGTGATTACAGTGAGAAACTCAAAGAAAACTATTGCATATTAGACAAAGGCTACAACTCTTTTCCAACCAGATTACCAGGAACAGCATATTCCAAAGCATTATCAGCAAGGAAGAAACTGAGAGAGATTCTGGGCGAGATAATAATGGAGCGGAGAGAAAAAAGGGTAACAGAGAGAGATTTGGTGGGTCATCTCTTGAGCTTCAGAGATGAAAATGGTGGAATTTTAAGTGAGGATCAGATCGCCGACAACATCATCGGAGTTCTGTTTGCGGCGCAGGACACCACCGCCAGTGTGCTGACGTGGATCCTTAAATACCTCCATGATAATTTGAAGCTCTTTGAGGCTGTTCGGGCAGAGCAGATGGAGATTTATAGAAGAAATGGTGATGGGAAGATGCCTCTGTCTTGGGCACAGATTAAGGATATGCCCTTAACTCATAGGGTTGTATTAGAAAGCTTGAGGATGGCTAGTATCATATCCTTCACTTTTAGGGAGGCAGTGGTGGATGTGGAATATAAAGGGTTCCTAATACCAAAGGGTTGGAAGGTGATGCCTTTGTTCAGGAATATTCATCACAATCCTGACTACTTCCCGAACCCTCAAATCTTTGATCCCTCCAGATTTGAGGTGGCTCCGAGGCCCAATACATTCATGCCATTTGGCAATGGAGTACACTCTTGCCCTGGGAACGAACTTGCCAAGCTGGAGATCCTCGTCTTACTTCATCACCTCATTACCAAGTTTAGGTGGGAAGTTGTGGGATCACAAAGCGGGGTTCAATATGGGCCATTCCCAATGCCTGTCAACGGGCTACCGGCCAGATTTTTCAAACAAACGACAACCAACCAATAG 1428 44.4 MEILSFTLYLIIFFISSAFLLYFKRNETPKPRKSLRLPPGSMGLPWIGETLQLYSQDPNIFFSEKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNIRKLVQNSLCLGSLRNLVPHIETAAISAAESWAAAGHVINTFLEMKKFSFDVGILAVFGKLESDYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDLVGHLLSFRDENGGILSEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNLKLFEAVRAEQMEIYRRNGDGKMPLSWAQIKDMPLTHRVVLESLRMASIISFTFREAVVDVEYKGFLIPKGWKVMPLFRNIHHNPDYFPNPQIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILVLLHHLITKFRWEVVGSQSGVQYGPFPMPVNGLPARFFKQTTTNQ 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9491145 9493567 - CmoCh11G013610.1 Cmo11g01361 391980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01361 475 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 10 469 - -
Cmo11g01361 475 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PANTHER CYTOCHROME P450 26 10 469 - -
Cmo11g01361 475 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 Gene3D Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cmo11g01361 475 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01361 475 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00643 Cmo-Chr4:3182160 Cmo11g01361 Cmo-Chr11:9491145 0 dispersed
Cmo07g01086 Cmo-Chr7:5656244 Cmo11g01361 Cmo-Chr11:9491145 1.42E-33 dispersed
Cmo11g01361 Cmo-Chr11:9491145 Cmo19g00623 Cmo-Chr19:6822808 0 dispersed
Cmo01g01899 Cmo-Chr1:13671091 Cmo11g01361 Cmo-Chr11:9491145 0 wgd
Cmo11g01361 Cmo-Chr11:9491145 Cmo05g00185 Cmo-Chr5:818448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01361 K09843 - csv:101219389 842.417