Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo11g01362 | ATGGCTTCCACTACCGTCGCACAAGAAGATCAGAACCAAGCCGGAAGGCACCAGGAAGTCGGTCACAAGAGCCTCTTACAGAGCGATGCTCTGTATCAGTACATTCTCGAGACGAGCGTTTATCCGAGAGAGCCAGAACCGATGAAGGAATTAAGAGAATTGACTGCCAAACATCCATGGAACATCATGACGACATCGGCCGACGAAGGACAGTTCTTAAACATGCTTTTGAAGCTAATTAATGCGAAGAAGACAATGGAGATTGGAGTTTACACTGGCTATTCTCTTCTAGCTACAGCTCTAGCTCTTCCTGAAGATGGACAGATTTTGGCTATGGATATTAACAAAGAAAATTATGAGCTCGGTTTGCCGGTTATTGAGAAAGCGGGCGTTGCTCACAAGATCGACTTTAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAGATGGTAGCGGATAAGAAGAATCATGGAAGTTACGACTTCATTTTTGTGGACGCTGATAAGGATAACTACATCAATTACCATAAGAGGTTGATCGATTTGGTTAAAGTTGGAGGAGTAATTGGGTACGACAACACTCTATGGAACGGGTCTGTTGTGGCCCCACCTGATGCACCAATGCGCAAGTACGTTAGGTATTATAGGGACTTTGTGCTGGAGCTCAATAAGGCTCTTGCTGCTGACCCTAGGATTGAGATCTGTATGCTCCCAGTTGGTGATGGAATTACTATCTGCCGTCGGATCAACTGA | 750 | 45.73 | MASTTVAQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGQILAMDINKENYELGLPVIEKAGVAHKIDFKEGPALPVLDEMVADKKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRIN | 249 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9517591 | 9519277 | - | CmoCh11G013620.1 | Cmo11g01362 | 391981 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo11g01362 | 249 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Cmo11g01362 | 249 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 8 | 249 | - | - | |
| Cmo11g01362 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 28 | 247 | IPR029063 | - | |
| Cmo11g01362 | 249 | CDD | AdoMet_MTases | 87 | 188 | - | - | |
| Cmo11g01362 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 248 | IPR002935 | GO:0008171 | |
| Cmo11g01362 | 249 | Gene3D | Vaccinia Virus protein VP39 | 14 | 249 | IPR029063 | - | |
| Cmo11g01362 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171 | |
| Cmo11g01362 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 8 | 249 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo11g01362 | Cmo-Chr11:9517591 | Cmo18g00690 | Cmo-Chr18:8788657 | 1.22E-88 | dispersed | |
| Cmo04g00690 | Cmo-Chr4:3425434 | Cmo11g01362 | Cmo-Chr11:9517591 | 3.98E-48 | transposed | |
| Cmo11g01362 | Cmo-Chr11:9517591 | Cmo19g00622 | Cmo-Chr19:6813678 | 1.75E-180 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo11g01362 | K00588 | - | csv:101205648 | 489.189 |