Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01384 | ATGGCGATTTCCACCACTTTCTGCTTCTCCATCGTCGTCTTTCTACCGCTGTTCCTATGTTTTTCCTCATCTTCATCGGCTTCTGATTCGTCCAGCTTTTCCATCATCGATGAAAACGCTAGACACCACTTGGATATCCAAATCGGATCCTCTCAGCGCTCCGATGAGGAGGTTGCGGCTCTGTACGAGTCGTGGTTGGTTCACAATGGAAAGGCTTACAACGCTCTTGGCGAGAAGGAGAGGCGATTTGAGATTTTCAAGGATAATCTCAGGTTCATTGATGAACATAACAGGGAATCGCGGAGTTATAAGGTTGGATTGAACCGTTTTGCCGATCTCTCCAACGAGGAGTATCGCGCCATGTTTCTTAGCGGTCGATTATCCCGAAAGAACCGCCTCTCCGCAACTAAGAGTCGTAGATATGCGATCGCGCTCGGCGATGATCTGCCGGATCATGTTGATTGGAGGAAGAAGGGCGCTGTTACGGATGTTAAAGATCAAGGACAGTGTGGGAGCTGTTGGGCTTTCTCAACAGTTGCTGCAGTGGAAGGAATAAATCAAATCACCACCGGTGAATTGATCTCTCTGTCGGAGCAGGAGCTTGTAGACTGTGATAGATCATATAACATGGGGTGCAATGGTGGTCTTATGGATTATGCTTTCCAGTTCATCATTGACAATGGTGGAATTGACACCGAGGAAGATTACCCTTACAAGGGCAGAGATGGCACTTGCGATCCCATCCGGAAAAATGCTAAAGCTGTAACCATAGATGGATATGAAGATGTTCCTGAGAATGATGAGAGCTCCTTGAAAAAGGCTGTGGCTAATCAACCTGTTAGTGTTGCCATTGAAGCTGGCGGCAGGGCTTTCCAACTTTACCAATCGGGTGTCTTCAACGGACTTTGTGGAACCGAACTGGATCATGGTGTTGTTGCTGTTGGATATGGCACAGAAGATGGAAAAGATTATTGGATTGTGAGGAATTCATGGGGTAAAAACTGGGGAGAGAATGGTTATATCAAGTTGGAGAGGAATGTAGGCAACATTACCACAGGCAAGTGTGGTATAGCCATAGAGGCTTCATACCCCACAAAGACAGGAAAGAACCCACCAAAACCTGCCCCTTCTCCGCCATCCCCTGTGAGTCCCCCGAATCAATGCGACGAATACTTCTCGTGCCAGGAAGGAACTACCTGTTGCTGTATCTATAAGTATGGAAGTACCTGCTTTGGTTGGGGATGCTGCCCGCTCGAGTCTGCAACCTGTTGCGACGACCATTACAGTTGCTGCCCCCATGAATACCCCATCTGTGACCTTGATGCAGGAACTTGCCTGAAGAGCAAAGGCAGCACGAGCGGAGTCGAACTGCTGAAGCGCGTTCCTGCTAAATATAACAGGGGCTGCGCTCAGAAGCTTGGCAAGATGTCCATTGTGTTCATCTGGCATATCTCGACTCATATAATGGATCCAAAATCTACTGATTCCCCACCGTCACCTACTGTTCATTCCTCGGCTACTAAATTTCCAGAAGTACATCCTCAGGCTCCTGCTTCCTCTGGAATGGATAATGTGGCACGTGAGGCACCATCTAAGCTATCTTCTTCTGGCATAACTTCATGGGCTAAGAACTTGAAAATTTCTCAACCACAGTCAGCTTCACCAGATGCCACGACTGAAAATGCTGGGAAGTCAGCGTTTGCTCGTTTTACTAGTGGCTTTGGCTTGAATTTATCTCCAAAATCTGCTGCACCTAATGATTCCCCAGATGCCTCTTCTAAACCTGCCCAACCCAGTTTGGTTGGATCATTTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTTCAAGTTAAAGCGCGTCATGTTGTCTCCCAAAACAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGACATGACTTATATTACTGAAAATATCATTGCAATGGGCTTCCCTGCGGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGAAACCATATGGAAGAAGTCATTAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATACAATCTTTGTTCCGAGAGGCTATATGATGCGTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCGGTTCAACTGATAATATCATTTTGCCAAAGTGCGTATTCATGGTTGAAGGATGATATCGAAAATGTTGTGGTTGTGCATTGCAAGGCAGGAATGGCCCGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTGAAGTTCTTTCCAACGGCTGAAGAATCTATTGAATACTACAACCAGAGAAGGTGTTTCGATGGCAAAGGCCTGGTCTTACCAAGTCAGATTAGGTATGTCAAATATTTCGAGCGTATTTTAACCTACTTCAATGGAGAAAATCCTCCTGGCCGCAGTTGTGTACTTAGAGGGTTTCGTCTCCACAGATGTCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAACACATCAAAGAACCAAGAATCTGTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTATTCGCCTTACCCGGGGAGCCTGGTCTAGCTGAGTTGTGCGGGGACTTCAAGGTTCATTTCCATGATCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTCTACACTAATGATCTTGATGGGTTCGACAAGAGAAAACTGCCTTCCCCTGGATTTCAGGTCGAGGTTGTTCTAGTAGATATGTTGCCGAACGTGGACAATACGACCAAGAAATTAGATGAAAGCTCGGGCTCGAAATCTTCTGCAGTTGATGGGAGTGAAGTTTCTGATAACCAAAACAGAAAATCATTAACTAATGAGAAAGATGATGTATTTTCTGACAGTGAATCAGAAGGTGGTTCTGCAAAGAGCAAGGATGCAGCATCAGGTTCAGGGTCTGAAGCATCAGCTGTCAAGACGACATCTAAATCTCAAATGAGTGCGACTTCATCCGACGATGTTGCGAGTTTATCACATGCGACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGGCTGCTCCAGCAGCCAGTGACCGAAAAGGTGATGGAGTCAAAATATCTGATTCCCTCTCAGAAATTCCAAATTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGGGACGACGAAGACTACGAGAGTGAGTAA | 3303 | 45.5 | MAISTTFCFSIVVFLPLFLCFSSSSSASDSSSFSIIDENARHHLDIQIGSSQRSDEEVAALYESWLVHNGKAYNALGEKERRFEIFKDNLRFIDEHNRESRSYKVGLNRFADLSNEEYRAMFLSGRLSRKNRLSATKSRRYAIALGDDLPDHVDWRKKGAVTDVKDQGQCGSCWAFSTVAAVEGINQITTGELISLSEQELVDCDRSYNMGCNGGLMDYAFQFIIDNGGIDTEEDYPYKGRDGTCDPIRKNAKAVTIDGYEDVPENDESSLKKAVANQPVSVAIEAGGRAFQLYQSGVFNGLCGTELDHGVVAVGYGTEDGKDYWIVRNSWGKNWGENGYIKLERNVGNITTGKCGIAIEASYPTKTGKNPPKPAPSPPSPVSPPNQCDEYFSCQEGTTCCCIYKYGSTCFGWGCCPLESATCCDDHYSCCPHEYPICDLDAGTCLKSKGSTSGVELLKRVPAKYNRGCAQKLGKMSIVFIWHISTHIMDPKSTDSPPSPTVHSSATKFPEVHPQAPASSGMDNVAREAPSKLSSSGITSWAKNLKISQPQSASPDATTENAGKSAFARFTSGFGLNLSPKSAAPNDSPDASSKPAQPSLVGSFTRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRSCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKTHQRTKNLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDMLPNVDNTTKKLDESSGSKSSAVDGSEVSDNQNRKSLTNEKDDVFSDSESEGGSAKSKDAASGSGSEASAVKTTSKSQMSATSSDDVASLSHATKQVSLGDGGAKQAAPAASDRKGDGVKISDSLSEIPNSESEFKAMAADASVFTFGDDEDYESE | 1100 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9670549 | 9679642 | + | CmoCh11G013840.1 | Cmo11g01384 | 392003 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01384 | 1100 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases histidine active site. | 307 | 317 | IPR025660 | - | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 952 | 977 | - | - | |
Cmo11g01384 | 1100 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A | 503 | 1100 | - | - | |
Cmo11g01384 | 1100 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases asparagine active site. | 324 | 343 | IPR025661 | - | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 491 | 508 | - | - | |
Cmo11g01384 | 1100 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases cysteine active site. | 167 | 178 | IPR000169 | - | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 491 | 533 | - | - | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 952 | 1070 | - | - | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 999 | 1040 | - | - | |
Cmo11g01384 | 1100 | ProSiteProfiles | C2 tensin-type domain profile. | 818 | 945 | IPR014020 | - | |
Cmo11g01384 | 1100 | SUPERFAMILY | Granulin repeat | 385 | 419 | - | - | |
Cmo11g01384 | 1100 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 746 | 785 | IPR000387 | GO:0016311|GO:0016791 | |
Cmo11g01384 | 1100 | SMART | pept_c1 | 149 | 365 | IPR000668 | GO:0006508|GO:0008234 | |
Cmo11g01384 | 1100 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 748 | 758 | IPR016130 | GO:0016311|GO:0016791 | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 578 | 599 | - | - | |
Cmo11g01384 | 1100 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 503 | 1100 | - | - | |
Cmo11g01384 | 1100 | Pfam | Cathepsin propeptide inhibitor domain (I29) | 62 | 118 | IPR013201 | - | |
Cmo11g01384 | 1100 | CDD | PTP_PTEN | 642 | 807 | IPR045101 | GO:0016791 | |
Cmo11g01384 | 1100 | SMART | GRAN_2 | 388 | 445 | IPR000118 | - | |
Cmo11g01384 | 1100 | CDD | Peptidase_C1A | 150 | 364 | IPR039417 | - | |
Cmo11g01384 | 1100 | Gene3D | Granulin | 385 | 448 | IPR037277 | - | |
Cmo11g01384 | 1100 | Pfam | Papain family cysteine protease | 149 | 365 | IPR000668 | GO:0006508|GO:0008234 | |
Cmo11g01384 | 1100 | Pfam | Granulin | 399 | 446 | IPR000118 | - | |
Cmo11g01384 | 1100 | Gene3D | Cysteine proteinases | 29 | 367 | - | - | |
Cmo11g01384 | 1100 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 645 | 812 | IPR029021 | - | |
Cmo11g01384 | 1100 | SUPERFAMILY | Cysteine proteinases | 54 | 365 | IPR038765 | - | |
Cmo11g01384 | 1100 | Gene3D | Protein tyrosine phosphatase superfamily | 617 | 814 | IPR029021 | - | |
Cmo11g01384 | 1100 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 632 | 811 | IPR029023 | - | |
Cmo11g01384 | 1100 | MobiDBLite | consensus disorder prediction | 978 | 998 | - | - | |
Cmo11g01384 | 1100 | SMART | PTEN_C2_2 | 816 | 944 | IPR014020 | - | |
Cmo11g01384 | 1100 | PRINTS | Papain cysteine protease (C1) family signature | 167 | 182 | IPR000668 | GO:0006508|GO:0008234 | |
Cmo11g01384 | 1100 | PRINTS | Papain cysteine protease (C1) family signature | 309 | 319 | IPR000668 | GO:0006508|GO:0008234 | |
Cmo11g01384 | 1100 | PRINTS | Papain cysteine protease (C1) family signature | 324 | 330 | IPR000668 | GO:0006508|GO:0008234 | |
Cmo11g01384 | 1100 | SMART | Inhibitor_I29_2 | 62 | 118 | IPR013201 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo11g01384 | Cmo20g00687 | CCT | |
Cmo02g00305 | Cmo11g01384 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00980 | Cmo-Chr3:7386979 | Cmo11g01384 | Cmo-Chr11:9670549 | 1.08E-164 | dispersed | |
Cmo07g00701 | Cmo-Chr7:3162479 | Cmo11g01384 | Cmo-Chr11:9670549 | 6.07E-158 | dispersed | |
Cmo10g00796 | Cmo-Chr10:3702364 | Cmo11g01384 | Cmo-Chr11:9670549 | 4.28E-71 | dispersed | |
Cmo11g01384 | Cmo-Chr11:9670549 | Cmo12g00389 | Cmo-Chr12:2409820 | 2.06E-125 | dispersed | |
Cmo19g00606 | Cmo-Chr19:6715562 | Cmo11g01384 | Cmo-Chr11:9670549 | 2.30E-83 | dispersed | |
Cmo05g00059 | Cmo-Chr5:215443 | Cmo11g01384 | Cmo-Chr11:9670549 | 2.54E-110 | transposed | |
Cmo11g01191 | Cmo-Chr11:6958706 | Cmo11g01384 | Cmo-Chr11:9670549 | 4.43E-46 | transposed | |
Cmo14g00573 | Cmo-Chr14:2920969 | Cmo11g01384 | Cmo-Chr11:9670549 | 1.66E-44 | transposed | |
Cmo01g01875 | Cmo-Chr1:13568015 | Cmo11g01384 | Cmo-Chr11:9670549 | 0 | wgd | |
Cmo11g01384 | Cmo-Chr11:9670549 | Cmo19g00605 | Cmo-Chr19:6699930 | 7.62E-118 | wgd | |
Cmo11g01384 | Cmo-Chr11:9670549 | Cmo07g00697 | Cmo-Chr7:3149293 | 0 | wgd | |
Cmo11g01384 | Cmo-Chr11:9670549 | Cmo09g00249 | Cmo-Chr9:1121924 | 7.75E-177 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01384 | K01110 | - | csv:101222304 | 1071.23 |