Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01384 ATGGCGATTTCCACCACTTTCTGCTTCTCCATCGTCGTCTTTCTACCGCTGTTCCTATGTTTTTCCTCATCTTCATCGGCTTCTGATTCGTCCAGCTTTTCCATCATCGATGAAAACGCTAGACACCACTTGGATATCCAAATCGGATCCTCTCAGCGCTCCGATGAGGAGGTTGCGGCTCTGTACGAGTCGTGGTTGGTTCACAATGGAAAGGCTTACAACGCTCTTGGCGAGAAGGAGAGGCGATTTGAGATTTTCAAGGATAATCTCAGGTTCATTGATGAACATAACAGGGAATCGCGGAGTTATAAGGTTGGATTGAACCGTTTTGCCGATCTCTCCAACGAGGAGTATCGCGCCATGTTTCTTAGCGGTCGATTATCCCGAAAGAACCGCCTCTCCGCAACTAAGAGTCGTAGATATGCGATCGCGCTCGGCGATGATCTGCCGGATCATGTTGATTGGAGGAAGAAGGGCGCTGTTACGGATGTTAAAGATCAAGGACAGTGTGGGAGCTGTTGGGCTTTCTCAACAGTTGCTGCAGTGGAAGGAATAAATCAAATCACCACCGGTGAATTGATCTCTCTGTCGGAGCAGGAGCTTGTAGACTGTGATAGATCATATAACATGGGGTGCAATGGTGGTCTTATGGATTATGCTTTCCAGTTCATCATTGACAATGGTGGAATTGACACCGAGGAAGATTACCCTTACAAGGGCAGAGATGGCACTTGCGATCCCATCCGGAAAAATGCTAAAGCTGTAACCATAGATGGATATGAAGATGTTCCTGAGAATGATGAGAGCTCCTTGAAAAAGGCTGTGGCTAATCAACCTGTTAGTGTTGCCATTGAAGCTGGCGGCAGGGCTTTCCAACTTTACCAATCGGGTGTCTTCAACGGACTTTGTGGAACCGAACTGGATCATGGTGTTGTTGCTGTTGGATATGGCACAGAAGATGGAAAAGATTATTGGATTGTGAGGAATTCATGGGGTAAAAACTGGGGAGAGAATGGTTATATCAAGTTGGAGAGGAATGTAGGCAACATTACCACAGGCAAGTGTGGTATAGCCATAGAGGCTTCATACCCCACAAAGACAGGAAAGAACCCACCAAAACCTGCCCCTTCTCCGCCATCCCCTGTGAGTCCCCCGAATCAATGCGACGAATACTTCTCGTGCCAGGAAGGAACTACCTGTTGCTGTATCTATAAGTATGGAAGTACCTGCTTTGGTTGGGGATGCTGCCCGCTCGAGTCTGCAACCTGTTGCGACGACCATTACAGTTGCTGCCCCCATGAATACCCCATCTGTGACCTTGATGCAGGAACTTGCCTGAAGAGCAAAGGCAGCACGAGCGGAGTCGAACTGCTGAAGCGCGTTCCTGCTAAATATAACAGGGGCTGCGCTCAGAAGCTTGGCAAGATGTCCATTGTGTTCATCTGGCATATCTCGACTCATATAATGGATCCAAAATCTACTGATTCCCCACCGTCACCTACTGTTCATTCCTCGGCTACTAAATTTCCAGAAGTACATCCTCAGGCTCCTGCTTCCTCTGGAATGGATAATGTGGCACGTGAGGCACCATCTAAGCTATCTTCTTCTGGCATAACTTCATGGGCTAAGAACTTGAAAATTTCTCAACCACAGTCAGCTTCACCAGATGCCACGACTGAAAATGCTGGGAAGTCAGCGTTTGCTCGTTTTACTAGTGGCTTTGGCTTGAATTTATCTCCAAAATCTGCTGCACCTAATGATTCCCCAGATGCCTCTTCTAAACCTGCCCAACCCAGTTTGGTTGGATCATTTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTTCAAGTTAAAGCGCGTCATGTTGTCTCCCAAAACAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGACATGACTTATATTACTGAAAATATCATTGCAATGGGCTTCCCTGCGGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGAAACCATATGGAAGAAGTCATTAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATACAATCTTTGTTCCGAGAGGCTATATGATGCGTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCGGTTCAACTGATAATATCATTTTGCCAAAGTGCGTATTCATGGTTGAAGGATGATATCGAAAATGTTGTGGTTGTGCATTGCAAGGCAGGAATGGCCCGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTGAAGTTCTTTCCAACGGCTGAAGAATCTATTGAATACTACAACCAGAGAAGGTGTTTCGATGGCAAAGGCCTGGTCTTACCAAGTCAGATTAGGTATGTCAAATATTTCGAGCGTATTTTAACCTACTTCAATGGAGAAAATCCTCCTGGCCGCAGTTGTGTACTTAGAGGGTTTCGTCTCCACAGATGTCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAACACATCAAAGAACCAAGAATCTGTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTATTCGCCTTACCCGGGGAGCCTGGTCTAGCTGAGTTGTGCGGGGACTTCAAGGTTCATTTCCATGATCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTCTACACTAATGATCTTGATGGGTTCGACAAGAGAAAACTGCCTTCCCCTGGATTTCAGGTCGAGGTTGTTCTAGTAGATATGTTGCCGAACGTGGACAATACGACCAAGAAATTAGATGAAAGCTCGGGCTCGAAATCTTCTGCAGTTGATGGGAGTGAAGTTTCTGATAACCAAAACAGAAAATCATTAACTAATGAGAAAGATGATGTATTTTCTGACAGTGAATCAGAAGGTGGTTCTGCAAAGAGCAAGGATGCAGCATCAGGTTCAGGGTCTGAAGCATCAGCTGTCAAGACGACATCTAAATCTCAAATGAGTGCGACTTCATCCGACGATGTTGCGAGTTTATCACATGCGACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGGCTGCTCCAGCAGCCAGTGACCGAAAAGGTGATGGAGTCAAAATATCTGATTCCCTCTCAGAAATTCCAAATTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGGGACGACGAAGACTACGAGAGTGAGTAA 3303 45.5 MAISTTFCFSIVVFLPLFLCFSSSSSASDSSSFSIIDENARHHLDIQIGSSQRSDEEVAALYESWLVHNGKAYNALGEKERRFEIFKDNLRFIDEHNRESRSYKVGLNRFADLSNEEYRAMFLSGRLSRKNRLSATKSRRYAIALGDDLPDHVDWRKKGAVTDVKDQGQCGSCWAFSTVAAVEGINQITTGELISLSEQELVDCDRSYNMGCNGGLMDYAFQFIIDNGGIDTEEDYPYKGRDGTCDPIRKNAKAVTIDGYEDVPENDESSLKKAVANQPVSVAIEAGGRAFQLYQSGVFNGLCGTELDHGVVAVGYGTEDGKDYWIVRNSWGKNWGENGYIKLERNVGNITTGKCGIAIEASYPTKTGKNPPKPAPSPPSPVSPPNQCDEYFSCQEGTTCCCIYKYGSTCFGWGCCPLESATCCDDHYSCCPHEYPICDLDAGTCLKSKGSTSGVELLKRVPAKYNRGCAQKLGKMSIVFIWHISTHIMDPKSTDSPPSPTVHSSATKFPEVHPQAPASSGMDNVAREAPSKLSSSGITSWAKNLKISQPQSASPDATTENAGKSAFARFTSGFGLNLSPKSAAPNDSPDASSKPAQPSLVGSFTRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRSCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKTHQRTKNLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDMLPNVDNTTKKLDESSGSKSSAVDGSEVSDNQNRKSLTNEKDDVFSDSESEGGSAKSKDAASGSGSEASAVKTTSKSQMSATSSDDVASLSHATKQVSLGDGGAKQAAPAASDRKGDGVKISDSLSEIPNSESEFKAMAADASVFTFGDDEDYESE 1100
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9670549 9679642 + CmoCh11G013840.1 Cmo11g01384 392003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01384 1100 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 307 317 IPR025660 -
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 952 977 - -
Cmo11g01384 1100 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 503 1100 - -
Cmo11g01384 1100 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 324 343 IPR025661 -
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 491 508 - -
Cmo11g01384 1100 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 167 178 IPR000169 -
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 491 533 - -
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 952 1070 - -
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 999 1040 - -
Cmo11g01384 1100 ProSiteProfiles C2 tensin-type domain profile. 818 945 IPR014020 -
Cmo11g01384 1100 SUPERFAMILY Granulin repeat 385 419 - -
Cmo11g01384 1100 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 746 785 IPR000387 GO:0016311|GO:0016791
Cmo11g01384 1100 SMART pept_c1 149 365 IPR000668 GO:0006508|GO:0008234
Cmo11g01384 1100 ProSitePatterns Tyrosine specific protein phosphatases active site. 748 758 IPR016130 GO:0016311|GO:0016791
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 578 599 - -
Cmo11g01384 1100 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 503 1100 - -
Cmo11g01384 1100 Pfam Cathepsin propeptide inhibitor domain (I29) 62 118 IPR013201 -
Cmo11g01384 1100 CDD PTP_PTEN 642 807 IPR045101 GO:0016791
Cmo11g01384 1100 SMART GRAN_2 388 445 IPR000118 -
Cmo11g01384 1100 CDD Peptidase_C1A 150 364 IPR039417 -
Cmo11g01384 1100 Gene3D Granulin 385 448 IPR037277 -
Cmo11g01384 1100 Pfam Papain family cysteine protease 149 365 IPR000668 GO:0006508|GO:0008234
Cmo11g01384 1100 Pfam Granulin 399 446 IPR000118 -
Cmo11g01384 1100 Gene3D Cysteine proteinases 29 367 - -
Cmo11g01384 1100 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 645 812 IPR029021 -
Cmo11g01384 1100 SUPERFAMILY Cysteine proteinases 54 365 IPR038765 -
Cmo11g01384 1100 Gene3D Protein tyrosine phosphatase superfamily 617 814 IPR029021 -
Cmo11g01384 1100 ProSiteProfiles Phosphatase tensin-type domain profile. 632 811 IPR029023 -
Cmo11g01384 1100 MobiDBLite consensus disorder prediction 978 998 - -
Cmo11g01384 1100 SMART PTEN_C2_2 816 944 IPR014020 -
Cmo11g01384 1100 PRINTS Papain cysteine protease (C1) family signature 167 182 IPR000668 GO:0006508|GO:0008234
Cmo11g01384 1100 PRINTS Papain cysteine protease (C1) family signature 309 319 IPR000668 GO:0006508|GO:0008234
Cmo11g01384 1100 PRINTS Papain cysteine protease (C1) family signature 324 330 IPR000668 GO:0006508|GO:0008234
Cmo11g01384 1100 SMART Inhibitor_I29_2 62 118 IPR013201 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01384 Cmo20g00687 CCT
Cmo02g00305 Cmo11g01384 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00980 Cmo-Chr3:7386979 Cmo11g01384 Cmo-Chr11:9670549 1.08E-164 dispersed
Cmo07g00701 Cmo-Chr7:3162479 Cmo11g01384 Cmo-Chr11:9670549 6.07E-158 dispersed
Cmo10g00796 Cmo-Chr10:3702364 Cmo11g01384 Cmo-Chr11:9670549 4.28E-71 dispersed
Cmo11g01384 Cmo-Chr11:9670549 Cmo12g00389 Cmo-Chr12:2409820 2.06E-125 dispersed
Cmo19g00606 Cmo-Chr19:6715562 Cmo11g01384 Cmo-Chr11:9670549 2.30E-83 dispersed
Cmo05g00059 Cmo-Chr5:215443 Cmo11g01384 Cmo-Chr11:9670549 2.54E-110 transposed
Cmo11g01191 Cmo-Chr11:6958706 Cmo11g01384 Cmo-Chr11:9670549 4.43E-46 transposed
Cmo14g00573 Cmo-Chr14:2920969 Cmo11g01384 Cmo-Chr11:9670549 1.66E-44 transposed
Cmo01g01875 Cmo-Chr1:13568015 Cmo11g01384 Cmo-Chr11:9670549 0 wgd
Cmo11g01384 Cmo-Chr11:9670549 Cmo19g00605 Cmo-Chr19:6699930 7.62E-118 wgd
Cmo11g01384 Cmo-Chr11:9670549 Cmo07g00697 Cmo-Chr7:3149293 0 wgd
Cmo11g01384 Cmo-Chr11:9670549 Cmo09g00249 Cmo-Chr9:1121924 7.75E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01384 K01110 - csv:101222304 1071.23