Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01386 | ATGGCTCTACACTCACATGAACACACAACCCAGCGCCACCACAACACTCTCTTCTTCCTCCACAGCACACACCAACAGCACCACCAACAACAACAACACCTGCAAACAGAGGACCCCATTTTCCACGACAATGGCGGCACCCACTTTCTGGAACAGACGACCCATTTCGTTGCTTTCGAAGATGAAGAGCTTGGTTCTTTGTTAGCCAAAGAACGAGATCAGAATCTTCAAAACGGCGACGTTTTGGAGCGCTTAATTGAAAGAGACGCAGCTCTGTCTCTGGCTAGAACAGAGGCCATCGAGTGGTTGCTTAAAGTTAATACCTTTTATGGCTTCTCCTCTGTCACCGCTCTCTTAGCCATTAATTACCTCGATCGCATCCTCTCTGGTCCTCATTTTCAAAGAGACAAGCCATGGATGCTACAGCTTCTTGCAGTAACTTGCATCTCTTTAGCAGCCAAAGTCGAAGAAATTCGTGTTCCTCTTCTTCTTGATCTCCAGGTGGAAGATTCAAAGTTCATATTCGAACCAAAAACGATACAAAGAATGGAGCTTTTGGTGCTGAGTGGTCTGAAATGGAAGATGCATCCAGTGACCCCTGTTTCGTTTCTTGGCATTGTAACGAAGCGGCTTGGGTTGAAGAATCAGTGCATTGAGAGGGAGTTTTTCCGGCGCTGTGAGCGTATTCTTCTCTCTCTCGTCTCTGATTCGAGATCAGTGGGGTTTCTTCCTTCTGTGATGGCTGTATCGGCAATGGTGAGCGTTGTTGAAGAGATGGGTGACTGTAACTGTTACTGTAACCCATTGGACTTTCAGGATCGCCTTCTTAATGCCCTCAAAATAACCAAGGAAAGATCGAAGAAATGCTGCAATGTGATAAGGGAGGTGACGAAACGGGAAACGAAAGCGAACCGATCGGGAAAGAAGAGGAAGCAGAACGAGGAGGACGAGGCGGAGGAAGAAGAAGACGATGACGAAGAGAGATCAAGAAGATCATTAGAAACCGAAACAGAATCAGAATCAGAAGGAGGAGGAAGCCCAAATGGAGTAATGGAAGGCAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGGCATAGAAGAAGTCACAGGGTGTTGTTGTTCCAAAAGAACCAAAAGCAGTGAAGAATCATGA | 1155 | 46.41 | MALHSHEHTTQRHHNTLFFLHSTHQQHHQQQQHLQTEDPIFHDNGGTHFLEQTTHFVAFEDEELGSLLAKERDQNLQNGDVLERLIERDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIVTKRLGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCYCNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEAEEEEDDDEERSRRSLETETESESEGGGSPNGVMEGNFSCESSNDSWGIEEVTGCCCSKRTKSSEES | 384 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9696714 | 9699068 | + | CmoCh11G013860.1 | Cmo11g01386 | 392005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01386 | 384 | CDD | CYCLIN | 96 | 188 | IPR013763 | - | |
Cmo11g01386 | 384 | Gene3D | - | 75 | 290 | - | - | |
Cmo11g01386 | 384 | MobiDBLite | consensus disorder prediction | 301 | 363 | - | - | |
Cmo11g01386 | 384 | Gene3D | - | 78 | 196 | - | - | |
Cmo11g01386 | 384 | Pfam | Cyclin, N-terminal domain | 74 | 195 | IPR006671 | - | |
Cmo11g01386 | 384 | SMART | cyclin_7 | 101 | 189 | IPR013763 | - | |
Cmo11g01386 | 384 | SUPERFAMILY | Cyclin-like | 88 | 196 | IPR036915 | - | |
Cmo11g01386 | 384 | Coils | Coil | 304 | 331 | - | - | |
Cmo11g01386 | 384 | MobiDBLite | consensus disorder prediction | 301 | 315 | - | - | |
Cmo11g01386 | 384 | Pfam | Cyclin, C-terminal domain | 198 | 316 | IPR004367 | - | |
Cmo11g01386 | 384 | PANTHER | CYCLINS | 46 | 357 | IPR039361 | - | |
Cmo11g01386 | 384 | PANTHER | CYCLIN-D3-1 | 46 | 357 | - | - | |
Cmo11g01386 | 384 | ProSitePatterns | Cyclins signature. | 96 | 127 | IPR006671 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00511 | Cmo11g01386 | CCT | |
Cmo11g01386 | Cmo16g00370 | CCT | |
Cmo04g00511 | Cmo11g01386 | ECH | |
Cmo11g01386 | Cmo16g00370 | ECH | |
Cmo11g01386 | Cmo19g00602 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo03g00875 | Cmo-Chr3:6824498 | 7.70E-49 | dispersed | |
Cmo01g01869 | Cmo-Chr1:13549712 | Cmo11g01386 | Cmo-Chr11:9696714 | 2.56E-72 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo12g00510 | Cmo-Chr12:3144150 | 1.20E-70 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo16g00370 | Cmo-Chr16:1697863 | 1.45E-89 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo19g00602 | Cmo-Chr19:6691342 | 1.30E-153 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo04g00511 | Cmo-Chr4:2537126 | 7.26E-82 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo05g00163 | Cmo-Chr5:696188 | 7.36E-70 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo07g00695 | Cmo-Chr7:3141146 | 5.89E-71 | wgd | |
Cmo11g01386 | Cmo-Chr11:9696714 | Cmo09g00254 | Cmo-Chr9:1141404 | 4.01E-72 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01386 | K14505 | - | csv:101222066 | 424.861 |