Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01393 ATGGGTAGCGTTGAAGGAGAAAGAACAGCATCAGGGTTTGCAGCGAGAGACCCATCTGGGTTCCTCTCTCCATACACTTACCAGCTCAGAGAAACAGGGCCTGAGGATGTTCACATAAGAGTCATATGCTGTGGACTCTGCCACACTGACGTTCACAACATCAAAAATGAACTCGGAATGTCCAATTACCCCATGGTTCCTGGGCATGAGGTTGTCGGAGAAGTGGTGGAAGTTGGGAAGAACGTGACGAGATTTAGAGTGAAGGATGTTGTCGGAGTTGGATGTATTGTCGGATCTTGTAAAAGCTGCGAACGATGTGAGACTGACAGAGAGCAATATTGCAATAACAGGATTTGGACTAATAATGATGTTTATTCCGACGGCCGCCCTACCCAAGGCGGCTTCGCCACCGCCATGGTCGTCGACCAAAAATTTGTGGTGAAAGTTCCAGATGGGATGGCGCCAGAGCAGGCGTCGGCGTTGCTATGCGCCGGCGTGACAGTATACAGCCCACTAAACCACTTCGGGCTGAAGAAAAGTGGGCTGAGAGGAGCGATCTTAGGCCTCGGCGGCGTTGGACACATGGGTGTGAAGATAGCAAAGGCATTGGGCCACCATGTCACAGTCATAAGCTCCTCCAACAAGAAGAGAGAAGAAGCTTTGGATCATCTCGGCGCCGACGACTACCTCGTCAGCTCCGACGATGCTCGGATGAAAGAAGCCGTGGACTCCCTCGATTACATCATCGACACCGTGCCAGCCCATCACCCTCTCGAGCCATATCTTTCGTTGCTGAAACTCGATGGGAAGTTAATCATGTTGGGCGTTATTAATAATCCTTTGCAATTCGTCTCTCCTATGGTCATTCTAGGGAGGAAGACGATTACAGGGAGCTTCATCGGGAGCATGAAAGAGACGCAAGAGATTTTGGAGTTCTTCAAAGAGAAGGAGCTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTATGTAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTAAGGTATAGGTTCGTGGTGGATGTGGAAGGAAGCAAGTTTTAA 1068 49.25 MGSVEGERTASGFAARDPSGFLSPYTYQLRETGPEDVHIRVICCGLCHTDVHNIKNELGMSNYPMVPGHEVVGEVVEVGKNVTRFRVKDVVGVGCIVGSCKSCERCETDREQYCNNRIWTNNDVYSDGRPTQGGFATAMVVDQKFVVKVPDGMAPEQASALLCAGVTVYSPLNHFGLKKSGLRGAILGLGGVGHMGVKIAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDDARMKEAVDSLDYIIDTVPAHHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILEFFKEKELSSMVEVVKMDYVNKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9761168 9762803 - CmoCh11G013930.1 Cmo11g01393 392012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01393 355 PANTHER ALDEHYDE REDUCTASE 4 354 - -
Cmo11g01393 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cmo11g01393 355 CDD CAD1 12 349 - -
Cmo11g01393 355 Gene3D - 164 320 - -
Cmo11g01393 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
Cmo11g01393 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Cmo11g01393 355 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Cmo11g01393 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cmo11g01393 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cmo11g01393 355 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 354 - -
Cmo11g01393 355 Gene3D - 13 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01393 Cmo-Chr11:9761168 Cmo20g01090 Cmo-Chr20:10384192 4.76E-123 dispersed
Cmo11g01393 Cmo-Chr11:9761168 Cmo16g00363 Cmo-Chr16:1669071 0 wgd
Cmo11g01393 Cmo-Chr11:9761168 Cmo04g00501 Cmo-Chr4:2509137 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01393 K00083 - csv:101214622 648.277