Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01409 ATGATGCTAAGATCGTGCTATCGGCCGCTTGAGCGGTGTTTTGGGCGATGGGCCGGCGATGGGCTGCTCTGGCACTCGGATTTGAAGCCTCATGCCTCTGGTGATTACTCGATCGCTGTTGTTCAGGCTAACTCTTGTCTTGAAGATCAGAGTCAGGTTTTCACGTCCCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTCGTTAATAAGCATCTTGTTCCTTATATGCACAAGTTTGCTTTAGAACAAGGTGGGCTATCAGAGGATGTTATTAAGAAAGCATTCAATGCTACTGAAGAGGAGTTTTTGCGTTTGGTGAAGACGGCTTTGCCTGCTAAGCCACAAATTGCATCTGTTGGATCATGTTGTCTTGTTGGTGCAATTTCTAATAAGAAGTTATACATTGCGAATCTTGGTGATTCGAGAGCTGTTCTTGGCCGTAGAGTTTCTGAGAATCAAAGAACACCCGTCGTTGCAGAACGGTTGTCGACCGATCACAACGTCGGTGTCGATGAAATTAGGGAAGAGGTTGTTGCACTTCATCCCGACGACGCTCATATCGTTGTCTATACTCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTTTCAAGATCAATCGGTGATGTCTATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAATCCTGTTCCATTGAAGCGACCGGTAATGACAGCCGAGCCATCGATACTAACACGCGAGCTCAAACCACAAGACTTATTCCTGATCTTTGCATCAGATGGCCTCTGGGAACAACTGACTGATGAGGCTGCTGTGGAGATAGTTGTGAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGAATGCTGCCCTACACGAGGCGGCGAGGAAGCGGGAGATGAGGTATGCCGAGATAAAGAAGCTCGAAAAGGGTATTCGACGTCATTTCCATGATGACATCACGGTCATCGTCATGTATCTCGACCATAACAAAGGCTCACGTACGAGCCGAGCAAAGAACATCGTTACCGGGTACACTAACGCACCTGTCGATGTTTTCTCCCTTAATTCAAACTATGAGGGTGAGGAAAAACTTCACACAATGTTGTGA 1140 46.67 MMLRSCYRPLERCFGRWAGDGLLWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLVPYMHKFALEQGGLSEDVIKKAFNATEEEFLRLVKTALPAKPQIASVGSCCLVGAISNKKLYIANLGDSRAVLGRRVSENQRTPVVAERLSTDHNVGVDEIREEVVALHPDDAHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVVKNPRAGIAKRLVNAALHEAARKREMRYAEIKKLEKGIRRHFHDDITVIVMYLDHNKGSRTSRAKNIVTGYTNAPVDVFSLNSNYEGEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9897645 9899584 - CmoCh11G014090.1 Cmo11g01409 392028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01409 379 CDD PP2Cc 42 337 IPR001932 -
Cmo11g01409 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Cmo11g01409 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Cmo11g01409 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 371 - -
Cmo11g01409 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 371 - -
Cmo11g01409 379 SUPERFAMILY PP2C-like 43 339 IPR036457 -
Cmo11g01409 379 SMART PP2C_4 25 335 IPR001932 -
Cmo11g01409 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cmo11g01409 379 Gene3D - 26 348 IPR036457 -
Cmo11g01409 379 SMART PP2C_SIG_2 38 337 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01409 Cmo19g00576 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01409 Cmo-Chr11:9897645 Cmo06g00094 Cmo-Chr6:549666 1.90E-141 dispersed
Cmo11g01409 Cmo-Chr11:9897645 Cmo19g00576 Cmo-Chr19:6559825 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01409 - K01102 csv:101216862 684.1