Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01427 ATGAGAGGGCAGCATTCTCACCCACCGAAGCCGATTTTCGCCGGACCTGATGACGAAAACGAACCGGGTCGTTCTTATCTCGCCGGAACGAACGCCCCATTAGGCGCTGGGATTCGGAAGAAGGGGACCGGAGTTCGGCCATGGCTGCTTCTGGACTTGACTGGTGGAGCTCAGGTCGTTGAGGCCGGAAAACACGCGATTATGCGGCGGACTGGTTTGCCCGCGCGAGACCTCCGGATTCTCGATCCGATGCTCTCGTATCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCTATTATCACCGCCCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCAGTAACCCCCTTCGTCGAGGAGCTTCAGAGGCGGGTTCTGCGGCACTACCAAGCCACTAAGGCCGCTCAGGAGGGCAATGGCGATGATTCCAGTTGGAGAAATCTCTATGACTTGGAGGAGCCACGATCCAGGGCTCAAAGTCCCCATAATCCCTATCAAGGATTTCCACAGGCTGAAGAGGAAGAGGGGAAGGAAAACGGTAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTACCGTTCGAGTTCGTCGCGTTGGAGGCGTGCCTTGAAGCTGCCTGTAGCTGCTTAGAAAGTGAAGCAGATACGTTGGAGCAAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGTGTGCGTCAAATCAAAAGTCGATTGGTTGCGATAACTGGACGAGTTCAAAAGGTGAGGGACGAATTAGAGCACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCCCGAGAGAGACGAAATGGACGATGATGTTCAGCAATTAGGCAAAGATGACAGGGAGGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAAATTCTGCTAATTATGAAGGCAATATAGATGCTTCACAGGATCATTTATTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGAACCCGGACAAGCACTACCCATAGCGCTGTAAGCAAACTCCTCGATGTCGAGGAGCTAGAGATGCTGTTGGAGGCTTACTTTGTGCAAATTGATGGTACACTCAACAAACTTTCGACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTAGATGACAAGCAGAATCATCTTTTACAAATGGGAGTAATGTTGACAACTGCGACCCTCGTCGTCAGTGCTTTCGTCGTGGTAGCAGGTATCTTCGGGATGAACATCCATATTGAACTATTCGAACCAGAAAAAGCAGGCATGCCAGAGTTCATGTGGACTGTTGGTGGTGGCACCATGGGAACCATCTTCCTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGTTTGCTCGAGTAG 1497 49.3 MRGQHSHPPKPIFAGPDDENEPGRSYLAGTNAPLGAGIRKKGTGVRPWLLLDLTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHYQATKAAQEGNGDDSSWRNLYDLEEPRSRAQSPHNPYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIPERDEMDDDVQQLGKDDREDSIPAEISLEGGGNSANYEGNIDASQDHLFGASNVGRDSHGTRTSTTHSAVSKLLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFMWTVGGGTMGTIFLYVIAIAWCKHKRLLE 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10049721 10053375 - CmoCh11G014270.1 Cmo11g01427 392046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01427 498 Coils Coil 493 498 - -
Cmo11g01427 498 MobiDBLite consensus disorder prediction 352 372 - -
Cmo11g01427 498 Pfam CorA-like Mg2+ transporter protein 382 488 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo11g01427 498 CDD Mrs2_Mfm1p-like 48 496 IPR039204 -
Cmo11g01427 498 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 32 498 - -
Cmo11g01427 498 MobiDBLite consensus disorder prediction 293 314 - -
Cmo11g01427 498 MobiDBLite consensus disorder prediction 163 191 - -
Cmo11g01427 498 MobiDBLite consensus disorder prediction 1 32 - -
Cmo11g01427 498 Coils Coil 211 231 - -
Cmo11g01427 498 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 32 498 IPR039204 -
Cmo11g01427 498 Gene3D - 38 119 - -
Cmo11g01427 498 Gene3D Magnesium transport protein CorA, transmembrane region 157 426 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01427 Cmo19g00556 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00196 Cmo-Chr1:883750 Cmo11g01427 Cmo-Chr11:10049721 1.44E-116 dispersed
Cmo11g01427 Cmo-Chr11:10049721 Cmo14g01066 Cmo-Chr14:5873476 2.58E-115 dispersed
Cmo11g01427 Cmo-Chr11:10049721 Cmo19g00556 Cmo-Chr19:6400264 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01427 - - mcha:111017360 840.876