Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01447 | ATGGGGTCAAATGGTTCTCACTGTATTCAAATTGGGTGTATTGGATTCATGAGCTTGGACACTATGTTGGAACCGGTTAGTTGCTGCCAGACCTCGCAGTCCCAGATTTACAGTGTAGTTAAACAGAAGAATCCTTTAAGAGCCTACTCTCATACTGTTCATCAACATTGTGGATCTTCCTTCAACTTGCATTATTCACGCTCGAAGAAAGTGACCGTTCCATCAAGCATCGTAAATTGCTGGAGGAATGACTATTCCTTTGTCCCTATACAATCCCACAACAATGCTACTACGTTAAACATCAAATTAGTTGGACGAAATGGATACAATTGGTATAATCATAGGCATAAACCAAGGCAAAGATCAAGAATGCATGCAGCTATTGATGTTGCAGCTGCTGTGGATGTCATCAACGATTTAGGATTGGACACACTGACATTCCTAGCTGTGACTGTCATAGTTGTTCCTCTATTTAGGAGAATTAAAGCTAGCCCTATTCTTGGTTTCTTCTTTGCTGGGATTGTACTTAATCAATTTGGTGTGATTAGAAATCTTACAGATGTTAAAGTTTTGTCCGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGGTTGGAGCTTTCATTTGCACGTCTAAAAGCTCTTGCAAGGTTTGCATTTGGCATGGGTTTGACACAGGTCATGTTATCGACTATCGCTTTCACAGCGTTTGAACTTCCCCCTAATGGAGCTATTGGAACAAGGATTTTGGAGTTCCTTTTTCACGCCAGATCTGACTTGGTTAACATCAGAAGCGTTGATGAAGCGATTGTGATCGGTGCTGCCCTCTCTCTATCTTCTTCAGCGTTCGTTTTACAGCTTCTTGCAGAGAAAGGAGAGCTTGCAACAAGATTTGGGTCAGCAACTCTAGGGATACTTCTTCTTCAGGATATTGCTGTTGTCCCTCTCTTGGTCATACTTCCTGTTCTTGAGAGCCAGAATTTGGGAACGGAAAGTATCTGGCCAATGCTTGCACAAGAAAGTCTGAAGGCTTTAGGTGGACTCGGTCTGCTGTCCCTTGGAGGAAAGTTGATTCTTAGGCGAGTTTTCGAGGTCGTTGCGGAAGCAAGAAGCTCAGAGGCTTTTGTGGCTCTTTGCCTGCTGACAGTTGCTGGCACATCACTAATCACTCAGAAACTGGGCTTTAGTGACACGCTGGGAGCATTTTTGGCTGGAGCAATATTAGCAGAAACTAATTTCCGGACACAGATTGAAGCTGATATTAGGCCATTTAGGGGCTTGCTCCTCGGGTTATTCTTTGTTACGACCGGGACCTCCATTGATACGCAGCTCCTGTTTCGAGAATGGCCGAATGTCCTTGCCCTTTTGGCAGGTTTAATAGCCATCAAGACGCTTATAATAACAGCAATAGGTCCCCGTGTCGGTCTCACAACTCAAGAAAGTGTACGAATAGGATTTCTTCTATCGCAAGGAGGCGAGTTCGGGTTTGTAGTGTTTTCTCTGGCAAACAGGCTTGGAGTGTTACCACTTGAGTTAAACAAGCTACTCATCATTATTGTTGTCTTGTCAATGGCTCTAACCCCGTTGCTAAACGAAGCTGGACGGAAGGCGTCTGAATACATCAGTGAAAAGTACAAGACAGACGATAAAGCTGCAGACACGGTGAATTTCGACGCTACCGAACCTGTTATCATCGTTGGATTCGGTCAAATGGGTCAGGTCCTGGCAAATTTCTTATCTACACCTTTGGTATCTGGAGCTGATGGCAGCTCTCCTGGATGGCCATATGTAGCGTTTGATATCGATCTTTCCGTAGTGAAGAGGTCAAGAAAACTTGGTTTTCCCGTTCTCTACGGAGACGGATCACGACCAGCAGTTCTGCAATCTGCTGGAATCTCTTCTCCAAAAGCTGTCATGGTTATGATCACGGAGAAGAAGGCAACAATCGAGGCCGTTCAAAAGCTCCGTCTCGCCTTCCCTGCGATCCCGATTTACGCCCGAGCTAAAGACGTGATGCATCTATTAGATTTAAAGAATGCCGGTGCAACGGATGCTATTCTCGAAGATGCTGAGACTAGTTTACAACTTGGGTCAAAGCTTTTGAAAGGGCTCGGCGTCATGTCCGACCAAGTGTCGTTCCTTAGTCAGATGGTTCGAAACTCTATGGAAGTACGAGCACAAGATGCACTCGACAAATCCAACGAGCAAGAGTTAGAGATTATGAAACCACTGCAGATACGTGTGAAGGACTCGATCATGACCCCGGAGAGCGAACTGTCGAGGCTGAACGGCAAAGAAATGGATGAAAGGAAGCAAGAAGATTTAGATGGAAAAGGAGTCCTGTACTGTGAACTTGATACAGAGGAAAACAGTTCAGATCCTGATAATATGGTACAGCCTCCAACCCCTTACATCACAGCCACTGATGCCTTGGAAAACTGA | 2442 | 44.88 | MGSNGSHCIQIGCIGFMSLDTMLEPVSCCQTSQSQIYSVVKQKNPLRAYSHTVHQHCGSSFNLHYSRSKKVTVPSSIVNCWRNDYSFVPIQSHNNATTLNIKLVGRNGYNWYNHRHKPRQRSRMHAAIDVAAAVDVINDLGLDTLTFLAVTVIVVPLFRRIKASPILGFFFAGIVLNQFGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALARFAFGMGLTQVMLSTIAFTAFELPPNGAIGTRILEFLFHARSDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELATRFGSATLGILLLQDIAVVPLLVILPVLESQNLGTESIWPMLAQESLKALGGLGLLSLGGKLILRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDTQLLFREWPNVLALLAGLIAIKTLIITAIGPRVGLTTQESVRIGFLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIIVVLSMALTPLLNEAGRKASEYISEKYKTDDKAADTVNFDATEPVIIVGFGQMGQVLANFLSTPLVSGADGSSPGWPYVAFDIDLSVVKRSRKLGFPVLYGDGSRPAVLQSAGISSPKAVMVMITEKKATIEAVQKLRLAFPAIPIYARAKDVMHLLDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDQVSFLSQMVRNSMEVRAQDALDKSNEQELEIMKPLQIRVKDSIMTPESELSRLNGKEMDERKQEDLDGKGVLYCELDTEENSSDPDNMVQPPTPYITATDALEN | 813 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10182273 | 10191676 | - | CmoCh11G014470.1 | Cmo11g01447 | 392066 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01447 | 813 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 562 | 700 | IPR036291 | - | |
Cmo11g01447 | 813 | MobiDBLite | consensus disorder prediction | 757 | 813 | - | - | |
Cmo11g01447 | 813 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 76 | 761 | - | - | |
Cmo11g01447 | 813 | ProSiteProfiles | RCK N-terminal domain profile. | 562 | 694 | IPR003148 | GO:0006813 | |
Cmo11g01447 | 813 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 76 | 761 | - | - | |
Cmo11g01447 | 813 | Gene3D | - | 139 | 539 | IPR038770 | - | |
Cmo11g01447 | 813 | Pfam | Sodium/hydrogen exchanger family | 147 | 531 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cmo11g01447 | 813 | Pfam | TrkA-N domain | 563 | 686 | IPR003148 | GO:0006813 | |
Cmo11g01447 | 813 | Gene3D | - | 560 | 729 | - | - | |
Cmo11g01447 | 813 | MobiDBLite | consensus disorder prediction | 761 | 783 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01447 | Cmo-Chr11:10182273 | Cmo14g02083 | Cmo-Chr14:15133237 | 1.38E-80 | dispersed | |
Cmo11g01447 | Cmo-Chr11:10182273 | Cmo19g00518 | Cmo-Chr19:6093556 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01447 | - | - | csv:101209266 | 1307.74 |