Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01452 | ATGTTGCAGTTTTCGATTCGGCGAGTGAGGAAATTGAATGTTCTGAGGCCTCAGATCTTTGCTCTTAGCAATTCTCGATTCTCCACCTCTCCTGAACCGTCTTCCAAGCCTAATCCTCCGAGAGTTCCTAATCTTATAGGAGGGAATTTTGTTGATTCCCGATCCTCAGCGTTTATAGATGTCATAAATCCAGCGACCCAAGAAGTTGTTTCTCAAGTTCCATTAACCACAAATGAAGAATTTAAAGCTGCAGTATCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACCCCAGTCACAACTCGCCAAAGAGTTATGCTCAAGCTTCAAGAACTTATCAGGCGAGATATTGACAAACTTGCTCTAAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCGCATGGAGATGTATTCCGGGGGCTAGAGGTCGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTTTCACATGGAATTGATACGTACAGCATCAGAGAGCCTCTAGGCGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATTCCCCTATGGATGTTTCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGACGAAGATATAAAAGCAATATCATTTGTTGGTTCGAACATTGCGGGCATGCATATATTTTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGGGCAAAAAATCATGCAATTGTCTTGCCTGATGCCAACATAGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCACTCAGTACAGTTGTCTTTGTTGGAGACTCCAAATTGTGGGAGGATAAACTTGTAGAACGTGCCAAAGCTCTGAAGGTAAGTTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGAGAGGATTCACAGATTAGTTCAATCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAGATATAGTGGTTCCTGGATATGAGCAAGGAAATTTTATTGGCCCTACTGTCTTAACAGACGTGACGCCTGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAAAGTTTTGAGGAGGCCATTAGCATCGTTAACAGAAATAGGTATGGCAATGGAGCTTCTATATTCACCGAATCTGGCATAGCAGCGAGGAAGTTTCAAACTCAAATTGAAGCTGGACAGGTCGGAATCAACGTTCCAATCCCCGTTCCCTTACCCTTCTTCTCGTTCACTGGCTCGAAGGCATCTTTCGCCGGGGATCTCAACTTTTATGGGAAGGCAGGGGTTAACTTCTTCACTCAGATCAAAACAGTTACACAACAATGGAAAGAATCAGGTGGGGGAAGTGCCGTCAACCTTGCAATGCCAACCTCTTTGAAGTCATAG | 1614 | 44.18 | MLQFSIRRVRKLNVLRPQIFALSNSRFSTSPEPSSKPNPPRVPNLIGGNFVDSRSSAFIDVINPATQEVVSQVPLTTNEEFKAAVSAAKQAFPAWRNTPVTTRQRVMLKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIFSRGSAKGKRVQSNMGAKNHAIVLPDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKALKVSSGTEPDADLGPVISKQAKERIHRLVQSGIDSGARLLLDGRDIVVPGYEQGNFIGPTVLTDVTPDMECYKEEIFGPVLLCMQAESFEEAISIVNRNRYGNGASIFTESGIAARKFQTQIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKESGGGSAVNLAMPTSLKS | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10209597 | 10217062 | + | CmoCh11G014520.1 | Cmo11g01452 | 392071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01452 | 537 | PANTHER | METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE | 13 | 534 | - | - | |
Cmo11g01452 | 537 | SUPERFAMILY | ALDH-like | 38 | 519 | IPR016161 | GO:0016491 | |
Cmo11g01452 | 537 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 13 | 534 | IPR010061 | GO:0004491 | |
Cmo11g01452 | 537 | CDD | ALDH_F6_MMSDH | 42 | 518 | IPR010061 | GO:0004491 | |
Cmo11g01452 | 537 | Pfam | Aldehyde dehydrogenase family | 50 | 514 | IPR015590 | GO:0016491 | |
Cmo11g01452 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 61 | 495 | IPR016162 | GO:0016491 | |
Cmo11g01452 | 537 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 312 | 323 | IPR016160 | GO:0016491 | |
Cmo11g01452 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 287 | 487 | IPR016163 | GO:0016620 | |
Cmo11g01452 | 537 | TIGRFAM | MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) | 44 | 518 | IPR010061 | GO:0004491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01452 | Cmo-Chr11:10209597 | Cmo20g00311 | Cmo-Chr20:1515459 | 3.73E-67 | dispersed | |
Cmo03g00888 | Cmo-Chr3:6890483 | Cmo11g01452 | Cmo-Chr11:10209597 | 0 | transposed | |
Cmo11g01452 | Cmo-Chr11:10209597 | Cmo19g00507 | Cmo-Chr19:6005476 | 5.53E-28 | wgd | |
Cmo11g01452 | Cmo-Chr11:10209597 | Cmo03g00887 | Cmo-Chr3:6888489 | 1.73E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01452 | K00140 | - | csv:101204924 | 984.556 |