Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01491 ATGGCTGCAACGGCTGCAACTTCTGGTGCTCTGCTTAATGGGTTAGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAACCTTGCTGGCCGGTGCCAGAGGCGGTGTCAATGTTGTCAGCTCTCGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGCTGTTAAGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTACCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGCGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACACAGCTTCTACTAATGGGATGGGTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCGGAGTCTCAATCCGTGGAATGGGCAACGCCATGGTCGAGGACCGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTCAAGGATGGAGTTTATATTCCAGACACGGAGAAATTGGAGAGATTGAAGCTGGCGGAGATCAAGCATGCTAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGATTGTAG 777 55.21 MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10562285 10564427 - CmoCh11G014910.1 Cmo11g01491 392110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01491 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Cmo11g01491 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 258 IPR001344 GO:0009765|GO:0016020
Cmo11g01491 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
Cmo11g01491 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 4 258 - -
Cmo11g01491 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01491 Cmo-Chr11:10562285 Cmo15g00609 Cmo-Chr15:2958942 8.82E-180 dispersed
Cmo11g01491 Cmo-Chr11:10562285 Cmo04g01932 Cmo-Chr4:9872268 8.96E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01491 K08917 - csv:101204705 498.819