Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01562 ATGGAGCAAGGTTCTGGGTTTGCCACTTCCTCCCCCGCTTCTCAGCTTTCGGGAGCGTACCTCACAAGGAATTTACTACTTGCATACCAAAGTTTTGGTGTAGTGTATGGAGATTTGAGTACTTCGCCCCTCTATGTTTACTCGAGTACGTTTGCAGGGAAGTTACTGACACATCGAACTGAGGAAGTAGTATTTGGTGCATTTTCCTTGATCTTCTGGACTCTTACACTGATACCATTGTTGAAGTATGTCTTCATTGTATTGAGCGCAGATGACAATGGTGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGTCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCTGATGAGGAGCTCTCAGCTTACAAATATGGACCATCTTCTCACGTAGTAGCCCCTTCTCCACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGGTCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTGACTCCTGCAATTTCAGTGAATACATATAAAGATCTTCATGTTTCCTGGCAGTTTACTGATTTCAGTAGAATGTATCTTCTATCCTCAGTTTCAGGTTTAAAAGTTACTGAAGCAAAATTGTCCAATGGGACACTCCTTTTGATTGCCTGTGTCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCGTTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTTTGTACAACATAATACGTTGGAACCCAAGTATTGTACGCGCAATTTCCCCTCATTATGTTATCAAGTTCTTAAGAGTCACCGGTAAAGACGGTTGGCTTTCTCTTGGAGGGGTTCTTCTGGCCATAACTGGTACTGAAGCTATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCTATAAGGCTTGCTTTTGTATTCATTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTCATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGAACCTGTATTTTGGCCTGTTTTTATTATTGCTACCCTGGCGGCTATTGTCGGGAGCCAAGCTGTGATTACTGCTACGTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTTACTCTTTCCATTACGATCGGGTTTCAAGATACGACAATGATTGGAAATGCTTACGGACTCGCTTGCATGACAGTTATGTTCACGACGACATTTCTTATGGCACTCGTCATTGTATTTGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTCATCATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTTCCGCTTGTGCTGTCAGCGTTTTTTATGATTGTTATGTTCGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCGAGTCTTGGTATAGTTCGCGTCCCAGGAATTGGTCTCATATACTCGGAATTGGCAACAGGAGTTCCCGCAATATTTTCTCACTTTGTGACGAATCTCCCTGCGTTTCACAAAGTTTTAGTCTTCGTGTGCGTAAAGTCTGTTCCTGTTCCGTATGTCTCGCCCGAAGAACGTTTTCTCATTGGGAGGGTCTGTCCTAGACCGTATCGCATGTATCGGTGCATAGTGAGGTATGGCTACAAGGATATTCAGAAGGATGATGGGGACTTTGAGAACCAGTTGATACTAAACATTGCAGAATTCATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCCGAAAACTCTTCAATCGATGGGAGGATGGCCGTGATAAGCACACGAAGCATACAATCGAATTTGAGCTTCATAGTATCGGGCCACGAAGAAGTTGGTACCAGCAACTCCATCCTCAGCAGCAAATCTGCCACACTCCATAGTTTACGATCCGCCTACGAGGACGAGAACCCACAACTAAGAAGACGCCAGGTACGGTTTCAGCTATCTCCCAGCCCTTCAATAGACCCTAGAGTTAGGGAAGAGTTGATGGACTTGATCCAAGCCAAGGAGGCCGGTGTAGCATATATAATGGGACACTCATATGTCAAGGCTAGAAGATCATCGTCATACTTGAAAAAGCTCGTAATAGATATCGGGTACTCGTTCCTCCGCAAGAACTGTCGAGGCCCATCTGTGGCGCTCAACATCCCTCACATCAGTCTAATTGAAGTGGGGATGATCTATTATGTCTAG 2415 43.77 MEQGSGFATSSPASQLSGAYLTRNLLLAYQSFGVVYGDLSTSPLYVYSSTFAGKLLTHRTEEVVFGAFSLIFWTLTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSHVVAPSPLKRFLERHKTLRTVLLLVVLFGACMVIGDGVLTPAISVNTYKDLHVSWQFTDFSRMYLLSSVSGLKVTEAKLSNGTLLLIACVILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIRWNPSIVRAISPHYVIKFLRVTGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRLAFVFIIYPCLVVQYMGQAAFLSKNLHLFPNSFYDSIPEPVFWPVFIIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLSITIGFQDTTMIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFIIFFWSVEGAYLSAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSENSSIDGRMAVISTRSIQSNLSFIVSGHEEVGTSNSILSSKSATLHSLRSAYEDENPQLRRRQVRFQLSPSPSIDPRVREELMDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11227075 11232018 - CmoCh11G015620.1 Cmo11g01562 392181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01562 804 PANTHER POTASSIUM TRANSPORTER 4 21 804 - -
Cmo11g01562 804 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo11g01562 804 Pfam K+ potassium transporter 198 622 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo11g01562 804 Pfam K+ potassium transporter 29 179 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo11g01562 804 TIGRFAM kup: potassium uptake protein 27 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01562 Cmo14g00789 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01562 Cmo-Chr11:11227075 Cmo14g00647 Cmo-Chr14:3259642 0 dispersed
Cmo13g00881 Cmo-Chr13:7970476 Cmo11g01562 Cmo-Chr11:11227075 0 dispersed
Cmo18g00252 Cmo-Chr18:1675166 Cmo11g01562 Cmo-Chr11:11227075 0 dispersed
Cmo01g00710 Cmo-Chr1:3641878 Cmo11g01562 Cmo-Chr11:11227075 0 transposed
Cmo11g01562 Cmo-Chr11:11227075 Cmo14g00789 Cmo-Chr14:4026143 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01562 K03549 - csv:101208973 1447.95