Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01578 ATGGCCATCTCAGAATCTCAGACCCGTTCCTCTCTGATTCCTACTTTCCTCTACTCGTCTTCGGCCATTCCGTTCCAGAAGATGCTTCGCTCCAATGATCCTTGTGTATCGCCGTCGCCATCGCCATCTCCGATTGTCGAATCTACACCGAGAAAGGCCTTCGCGATTCCGTCTCCGAGTGAACCGAGAAAGAAACTGGAGATGTATTCGCCGGCTTTCTACGCTGCCTGTGCCGTCGGTGGAAGCCTCAGTTGTGGTCTCACTCACACGGCCGTCACTCCTCTCGATCTCATTAAGTGCAATATGCAGATTGACCCTGTGAAATACAAGAGCATTTCATCAGGTTTTGGAGTTCTTTTAAAGGAGCAAGGAATCAGGGGCTTCTTCAGGGGTTGGGCGCCAACTTTTCTGGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGTATCTATGAATTCTTTAAGAAATACTATTCCGACATAGCTGGTCCAGAGTATGCAGCAAAATACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCATTTGAAGCTGTTAAAGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCTGATGGCCTTCCCAAATTCGTCAGATCTGAAGGTGCCCTTGGGTTGTACAAGGGTATTGTTCCTCTATGGGGGCGTCAGATCCCATATACAATGATGAAATTTGCAACATTTGAGAATCTCGTGGAGCTCATCTACAAGCATGTCATTCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTGGGCGTCAGCTTTGCTGGTGGATATATTGCGGGAGTTTCTTGTGCTATAGTTTCTCACCCTGCAGACAATCTGGTCTCTTTTCTCAACAATGCTAAAGGGGCTACCGTTGGTGACGCTGTGAAGAAGCTTGGAGTATGGGGCCTCTTTACACGAGGGCTGCCTCTACGCATAGTCATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTACGACGCATTCAAAGTTTTTGTCGGATTGCCAACTACCGGTGGGGTTGCCCCTGCCCCCGCCGCCGCCATTGAACTTCCAAGTGCGTAG 1116 49.28 MAISESQTRSSLIPTFLYSSSAIPFQKMLRSNDPCVSPSPSPSPIVESTPRKAFAIPSPSEPRKKLEMYSPAFYAACAVGGSLSCGLTHTAVTPLDLIKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWAPTFLGYSAQGACKYGIYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVFVGLPTTGGVAPAPAAAIELPSA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11333119 11337624 + CmoCh11G015780.1 Cmo11g01578 392197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01578 371 Gene3D Mitochondrial carrier domain 73 350 IPR023395 -
Cmo11g01578 371 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 366 IPR044677 GO:0005315|GO:1990547
Cmo11g01578 371 Pfam Mitochondrial carrier protein 173 257 IPR018108 -
Cmo11g01578 371 Pfam Mitochondrial carrier protein 74 158 IPR018108 -
Cmo11g01578 371 SUPERFAMILY Mitochondrial carrier 74 345 IPR023395 -
Cmo11g01578 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Cmo11g01578 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
Cmo11g01578 371 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 366 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02319 Cmo11g01578 CCT
Cmo04g02319 Cmo11g01578 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02319 Cmo-Chr4:17230367 Cmo11g01578 Cmo-Chr11:11333119 0 dispersed
Cmo11g01578 Cmo-Chr11:11333119 Cmo15g00842 Cmo-Chr15:4272535 0 dispersed
Cmo11g01793 Cmo-Chr11:12593842 Cmo11g01578 Cmo-Chr11:11333119 7.88E-111 transposed
Cmo10g00024 Cmo-Chr10:137127 Cmo11g01578 Cmo-Chr11:11333119 0 wgd
Cmo11g00007 Cmo-Chr11:39304 Cmo11g01578 Cmo-Chr11:11333119 1.96E-37 wgd
Cmo11g01578 Cmo-Chr11:11333119 Cmo14g00771 Cmo-Chr14:3917356 1.91E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01578 K15102 - csv:101203018 617.461