Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01578 | ATGGCCATCTCAGAATCTCAGACCCGTTCCTCTCTGATTCCTACTTTCCTCTACTCGTCTTCGGCCATTCCGTTCCAGAAGATGCTTCGCTCCAATGATCCTTGTGTATCGCCGTCGCCATCGCCATCTCCGATTGTCGAATCTACACCGAGAAAGGCCTTCGCGATTCCGTCTCCGAGTGAACCGAGAAAGAAACTGGAGATGTATTCGCCGGCTTTCTACGCTGCCTGTGCCGTCGGTGGAAGCCTCAGTTGTGGTCTCACTCACACGGCCGTCACTCCTCTCGATCTCATTAAGTGCAATATGCAGATTGACCCTGTGAAATACAAGAGCATTTCATCAGGTTTTGGAGTTCTTTTAAAGGAGCAAGGAATCAGGGGCTTCTTCAGGGGTTGGGCGCCAACTTTTCTGGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGTATCTATGAATTCTTTAAGAAATACTATTCCGACATAGCTGGTCCAGAGTATGCAGCAAAATACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCATTTGAAGCTGTTAAAGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCTGATGGCCTTCCCAAATTCGTCAGATCTGAAGGTGCCCTTGGGTTGTACAAGGGTATTGTTCCTCTATGGGGGCGTCAGATCCCATATACAATGATGAAATTTGCAACATTTGAGAATCTCGTGGAGCTCATCTACAAGCATGTCATTCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTGGGCGTCAGCTTTGCTGGTGGATATATTGCGGGAGTTTCTTGTGCTATAGTTTCTCACCCTGCAGACAATCTGGTCTCTTTTCTCAACAATGCTAAAGGGGCTACCGTTGGTGACGCTGTGAAGAAGCTTGGAGTATGGGGCCTCTTTACACGAGGGCTGCCTCTACGCATAGTCATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTACGACGCATTCAAAGTTTTTGTCGGATTGCCAACTACCGGTGGGGTTGCCCCTGCCCCCGCCGCCGCCATTGAACTTCCAAGTGCGTAG | 1116 | 49.28 | MAISESQTRSSLIPTFLYSSSAIPFQKMLRSNDPCVSPSPSPSPIVESTPRKAFAIPSPSEPRKKLEMYSPAFYAACAVGGSLSCGLTHTAVTPLDLIKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWAPTFLGYSAQGACKYGIYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVFVGLPTTGGVAPAPAAAIELPSA | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11333119 | 11337624 | + | CmoCh11G015780.1 | Cmo11g01578 | 392197 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01578 | 371 | Gene3D | Mitochondrial carrier domain | 73 | 350 | IPR023395 | - | |
Cmo11g01578 | 371 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 4 | 366 | IPR044677 | GO:0005315|GO:1990547 | |
Cmo11g01578 | 371 | Pfam | Mitochondrial carrier protein | 173 | 257 | IPR018108 | - | |
Cmo11g01578 | 371 | Pfam | Mitochondrial carrier protein | 74 | 158 | IPR018108 | - | |
Cmo11g01578 | 371 | SUPERFAMILY | Mitochondrial carrier | 74 | 345 | IPR023395 | - | |
Cmo11g01578 | 371 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 169 | 253 | IPR018108 | - | |
Cmo11g01578 | 371 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 72 | 156 | IPR018108 | - | |
Cmo11g01578 | 371 | PANTHER | MITOCHONDRIAL PHOSPHATE TRANSPORTER | 4 | 366 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02319 | Cmo11g01578 | CCT | |
Cmo04g02319 | Cmo11g01578 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02319 | Cmo-Chr4:17230367 | Cmo11g01578 | Cmo-Chr11:11333119 | 0 | dispersed | |
Cmo11g01578 | Cmo-Chr11:11333119 | Cmo15g00842 | Cmo-Chr15:4272535 | 0 | dispersed | |
Cmo11g01793 | Cmo-Chr11:12593842 | Cmo11g01578 | Cmo-Chr11:11333119 | 7.88E-111 | transposed | |
Cmo10g00024 | Cmo-Chr10:137127 | Cmo11g01578 | Cmo-Chr11:11333119 | 0 | wgd | |
Cmo11g00007 | Cmo-Chr11:39304 | Cmo11g01578 | Cmo-Chr11:11333119 | 1.96E-37 | wgd | |
Cmo11g01578 | Cmo-Chr11:11333119 | Cmo14g00771 | Cmo-Chr14:3917356 | 1.91E-30 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01578 | K15102 | - | csv:101203018 | 617.461 |