Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01588 ATGAATGACGCTGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCATGAGCCAGAGATCATCGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCATGTAATGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGGTTTAG 636 45.44 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSGNEHVYKNLLKELIVQSLLRLKEPAVLLRCRKSDLHLVESVLSSAAYEYANKAEVHEPEIIVDHVHLPPGPSHHHHHVMASRDGKIVCENTLDARLDVVFRKKLPEV 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11398786 11404621 + CmoCh11G015880.1 Cmo11g01588 392207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01588 211 Pfam ATP synthase (E/31 kDa) subunit 16 211 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cmo11g01588 211 PANTHER BNAC03G72900D PROTEIN 1 209 - -
Cmo11g01588 211 Coils Coil 38 61 - -
Cmo11g01588 211 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 209 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cmo11g01588 211 Gene3D - 92 211 IPR038495 -
Cmo11g01588 211 Hamap V-type proton ATPase subunit E [atpE]. 8 211 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cmo11g01588 211 Gene3D - 1 62 - -
Cmo11g01588 211 SUPERFAMILY V-type ATPase subunit E-like 87 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01588 Cmo-Chr11:11398786 Cmo14g00761 Cmo-Chr14:3856138 2.96E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01588 K02150 - csv:101217221 362.073