Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01620 ATGCCTCATTCGGTATTCTCAATAGGTTTATCGTTTATTTTCGAGGTCGGTCGCTATTCTCTCGACAAGCTTGTTGAAACCAATGTCCCGTGTCATTTGTTTGGTCGGTTTTTCGGTTTCTTCTTGGACTTCTTCTTCAGAGGTCTCCTTCTCCATTTCAGCTCAGTGCCGCCGCTGCCTCTCTCACGCTCAGTGTCGCCGCCGCCGCATCCTTCATCGGTTTTCTACTCTCTGGTTGCTACTGGGATTTGCTATCTTCTCAAGGAAATTTCGAGAATCTCAATGGGGAAGAACGAATTTCTAACCCCTAAAGCGATCGCAAACAGAATCAAGGCAAAAGGGCTCCAGAAGCTCAGATGGTATTGTCAGATGTGTCAGAAGCAGTGCCGTGATGAAAATGGCTTTAAATGTCACTGTATGAGTGAAAGCCATCAACGCCAAATGCAGATCTTTGGTCAAAACCCCCATCGTATTGTTGAAGGTTATTCTGAAGAGTTTGAGAGATCTTTCATGGAGCACATTAAGCGTAGCCATCGGTTCAGTCGTGTGGCAGCTACAGTAGTCTACAATGAATACATTAATGACAGACATCATATTCATATGAATTCAACGCAGTGGGCTACTCTCACTGAGTTTGTAAAACACTTGGGTCGAACAGGGCAGTGTAAGGTGGACGAGACTCCCAAGGGTTGGTTCATTACTTACATTGATAGAGATTCAGAGACGCTTTTTAAAGAGAAAATGAAAAACAAGAGGATGAGGGCAGATTTGGCTGAAGAAGAGAAGCAAGAGAGAGAGATACAGAAGCAAATTGAGAGGGCTGAGCAATTAGCACCTTTGGCTTCTGTATCTGCTGAGCCTTTGGAGGCTGAACAAACGAGGGAGTTAAAATTGGATAGTGGTGTTAAGCTTGGATTTTCTTTGGGAACAACATCAAAATTAAAGGAGAAAGGAGAGAGTTCCAGGGTGGTTTTTGATGAGGATGAGAATGGTGAGACTGCCAAGGGGAAACCTGGAGAGACTTCCAAAAACAAGATGGGTAGCGGTGGTCTGTCAGCTTTGGAGGCGTTGATGAGAGAAGAAGAGATGAAGAAGGAGAAGATTAATAGAAAGGATTACTGGCTGTGTGAGGGAATAATTGTGAAGGTCATGAGTAAGAATTTGGCTGAGATGGGATACTATAAACAGAAGGGAGTTGTGCGAAAGGTGATTGATAAATATGTTGGAGAGATTGAAACGCTTGATGGAAAGCATGTGTTGAGAGTTGATCAAGAAGAATTAGAAACAGTGATACCCCAAATTGGTGGCTTAGTCAGGATAGTGAATGGGGCATATCGTGGATCGAATGCTAGGTTGTTGGGTGTTGACACCGATAAGTTTTGTGCTAAAGTGCAAATAGAAAAGGGTGTATACGATGGCCGGGTGCTTAAGGCTGTTGAATATGAAGATATCTCAAGAAAGCTTCACTTCCAGTCACTCCTTCATCTCTGGTTTTTGACGTCTCGATGCCGTGTTAGGGTTTTCGGCCTTCCCTCGATTTTCTGGAATTTTGAGATTTCGATTCTGTTTCTGCTGCTCTATTTCTTCGAAGAATCTGGAATTTGCGTACTGTTAGGTTTGGTTTTTTCGTTTTTGTAG 1638 43.35 MPHSVFSIGLSFIFEVGRYSLDKLVETNVPCHLFGRFFGFFLDFFFRGLLLHFSSVPPLPLSRSVSPPPHPSSVFYSLVATGICYLLKEISRISMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYSEEFERSFMEHIKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGQCKVDETPKGWFITYIDRDSETLFKEKMKNKRMRADLAEEEKQEREIQKQIERAEQLAPLASVSAEPLEAEQTRELKLDSGVKLGFSLGTTSKLKEKGESSRVVFDEDENGETAKGKPGETSKNKMGSGGLSALEALMREEEMKKEKINRKDYWLCEGIIVKVMSKNLAEMGYYKQKGVVRKVIDKYVGEIETLDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAKVQIEKGVYDGRVLKAVEYEDISRKLHFQSLLHLWFLTSRCRVRVFGLPSIFWNFEISILFLLLYFFEESGICVLLGLVFSFL 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11561687 11568102 - CmoCh11G016200.1 Cmo11g01620 392239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01620 545 Gene3D - 378 431 - -
Cmo11g01620 545 Pfam KN17 SH3-like C-terminal domain 370 423 IPR041330 -
Cmo11g01620 545 Coils Coil 351 371 - -
Cmo11g01620 545 Gene3D - 154 254 IPR038254 -
Cmo11g01620 545 Coils Coil 248 277 - -
Cmo11g01620 545 MobiDBLite consensus disorder prediction 318 349 - -
Cmo11g01620 545 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 95 486 IPR037321 -
Cmo11g01620 545 SUPERFAMILY beta-beta-alpha zinc fingers 120 160 IPR036236 -
Cmo11g01620 545 MobiDBLite consensus disorder prediction 318 339 - -
Cmo11g01620 545 Pfam Domain of Kin17 curved DNA-binding protein 146 271 IPR019447 -
Cmo11g01620 545 SMART Kin17_mid_2 146 272 IPR019447 -
Cmo11g01620 545 Gene3D - 432 487 IPR014722 -
Cmo11g01620 545 CDD KOW_KIN17 434 486 IPR041995 -
Cmo11g01620 545 PANTHER BNAA05G13760D PROTEIN 95 486 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01620 K13102 - csv:101216499 719.153