Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo11g01644 | ATGACATCGACGATGGGAAGGCGATCCATATGGGTTGCTCTTCTCGTCATCTCTCTTCTTTTTTCGTTGCGACCTCAGAGAGTTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGGTTCTAAAGATTCTGCCACTGAGAGTGCTCCAAAGCAGGATTGGAACGATGCTCGTGAGGTACACTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGATAAAAAGAAACACAAGATTTCAACGGAGTGTAGGCTTCACCCGGATAATGATATGTTCAGAGATCAAGAACAGCACAAAACGCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTTGATCAGCATTTTGACAATAGACACTATGATTTGCTGAATGTGAGTCGAAACAAGTGCATGGCAGATCTTTGTGGTGCATTGCACTGTGATCATGTGATGGATTCAGTATCACAGAAGAAAAGTAAATGCAATCCTGCTGCTACTGCAAGAAACAAACACATGTGTGAGGCTCTTGCTGATAGTTGTTTTCCCATCAACCAGGGTGTAGCGAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACTTGTAGCGGAAAGCCAAAACCGTTCTCGAGAGGTCGACAGGTTAGGACGAGTTGGTCCTACGTCGTTATTTCAGTTTTGACCATACTTATTGTGCTGTTTTTCTATGTCTTCGTTTACTTATATAAGAGAGGAATGCGAACGAGACCACAAGTGTTGAAGCGCCTCTCGGAAAGTGGAAGAAAGAAAAAACCTTCGTAG | 852 | 43.08 | MTSTMGRRSIWVALLVISLLFSLRPQRVSSTLPLQSLNQGSKDSATESAPKQDWNDAREVHCSRERSRAAWKIIEEYLMPFVDKKKHKISTECRLHPDNDMFRDQEQHKTHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYDLLNVSRNKCMADLCGALHCDHVMDSVSQKKSKCNPAATARNKHMCEALADSCFPINQGVASHLHEFFLRQFCDAHTCSGKPKPFSRGRQVRTSWSYVVISVLTILIVLFFYVFVYLYKRGMRTRPQVLKRLSESGRKKKPS | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 11680047 | 11685837 | - | CmoCh11G016440.1 | Cmo11g01644 | 392263 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo11g01644 | 283 | MobiDBLite | consensus disorder prediction | 34 | 57 | - | - | |
| Cmo11g01644 | 283 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 119 | 140 | IPR013087 | - | |
| Cmo11g01644 | 283 | PANTHER | ZINC FINGER PROTEIN-RELATED | 12 | 283 | - | - | |
| Cmo11g01644 | 283 | MobiDBLite | consensus disorder prediction | 34 | 51 | - | - | |
| Cmo11g01644 | 283 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 12 | 283 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo11g01644 | Cmo14g00711 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo10g00077 | Cmo-Chr10:352006 | Cmo11g01644 | Cmo-Chr11:11680047 | 8.26E-114 | wgd | |
| Cmo11g01644 | Cmo-Chr11:11680047 | Cmo14g00711 | Cmo-Chr14:3648985 | 1.14E-173 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo11g01644 | - | - | csv:101219582 | 503.056 |