Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01659 ATGGATTCTGGTAATGGGTTTTATTCAACTGGTGAATTCAATTTGGATGCCAAATGGTTGATTGATCCTAAGCATCTTTTTGTTGGGCCGAAGATTGGGGAAGGTGCCCATGCCAAGGTGTATGAGGGAAAGTACAAAAATCAGATTGTGGCTATTAAAATGGTGGGTAAAGGAGATACTCCTGAGAGGATAGCTAGAAGAGAAGCTCGGTTTGCTAGAGAGGTTGCAATGTTGTCCAAAGTGCAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTGACCGAATTACTTACAGGTGGAACATTGCGCAAATACCTCTTGAATTTGAGGCCAAGGAGCCTGGAACTTGACGTTGCGATCGGGTTTGCGCTTGATATTGCTCGTGCAGTGGAGTGTTTACACTCCCATGGAATCATTCACCGTGACCTTAAACCAGAGAACTTGATATTGACTGCAGACCATAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCTAGAGAAGAATCAGTCACAGAGATGATGACTGCAGAAACAGGAACATATAGATGGATGGCTCCGGAGCTCTATAGCACAGTAACTTTAAAACATGGAGATAAAAAGCATTACAATCATAAAGTTGATGCTTACAGCTTTGCCATTGTATTGTGGGAGCTCATTCTTAACAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCGGCATATGCAGCTGCTTTTAAGAACATGAGGCCTAGTGCTGAAAATCTTCCAGAAGACTTGGCTTTAATAGTGACATCATGTTGGAGAGAGGATCCAAATACAAGGCCAAACTTCAGCCAGATTATACAGATGCTATTGCAGTCCCTTTCTAAAATATCACCACGAGCACCTGCGATCCCACCTCGGATATGTGCTGAAGATGTCGTTATGCCACCCGAATCTCCCAGTACAAATTCCTTGATGGCTGTAAGGCACGGCTCGGGGGAAGCGTCACACGGCATGATCGAAGAAAACCCAACAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA 1056 43.66 MDSGNGFYSTGEFNLDAKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGKGDTPERIARREARFAREVAMLSKVQHKNLVKFIGACKEPMMVIVTELLTGGTLRKYLLNLRPRSLELDVAIGFALDIARAVECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALIVTSCWREDPNTRPNFSQIIQMLLQSLSKISPRAPAIPPRICAEDVVMPPESPSTNSLMAVRHGSGEASHGMIEENPTSSFFCFNKCY 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11780192 11784215 - CmoCh11G016590.1 Cmo11g01659 392278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01659 351 SUPERFAMILY Protein kinase-like (PK-like) 17 308 IPR011009 -
Cmo11g01659 351 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Cmo11g01659 351 CDD STKc_MAP3K-like 32 286 - -
Cmo11g01659 351 ProSitePatterns Protein kinases ATP-binding region signature. 32 57 IPR017441 GO:0005524
Cmo11g01659 351 PANTHER SERINE-THREONINE PROTEIN KINASE 1 328 - -
Cmo11g01659 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Cmo11g01659 351 PANTHER PROTEIN KINASE ATN1 1 328 - -
Cmo11g01659 351 Gene3D Transferase(Phosphotransferase) domain 1 106 298 - -
Cmo11g01659 351 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Cmo11g01659 351 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Cmo11g01659 351 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Cmo11g01659 351 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Cmo11g01659 351 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01659 351 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01659 351 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02810 Cmo11g01659 CCT
Cmo04g02810 Cmo11g01659 ECH
Cmo11g01659 Cmo14g00693 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00186 Cmo-Chr6:1006451 Cmo11g01659 Cmo-Chr11:11780192 9.29E-65 dispersed
Cmo11g01659 Cmo-Chr11:11780192 Cmo14g00014 Cmo-Chr14:77131 2.72E-145 dispersed
Cmo10g00095 Cmo-Chr10:410087 Cmo11g01659 Cmo-Chr11:11780192 0 wgd
Cmo11g01659 Cmo-Chr11:11780192 Cmo14g00693 Cmo-Chr14:3568346 0 wgd
Cmo11g01659 Cmo-Chr11:11780192 Cmo04g02810 Cmo-Chr4:20168778 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74687 PF07714 PK_Tyr_Ser-Thr 4.00E-56 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01659 - - csv:101219563 662.144