Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01694 | ATGCATGGGAAATTCACGAGGCGCCTAAAATCTCAACCGCCCATCAAAGTCCAACCCACAGAAAACAGATACGACATACAATACTCTAGGATACAACATACAATACTCGAGGGTAGACCAATTAGATCAAACCAAATACAACATACAATACTCGAGAGTAGACCAATTAGATCAAACCAAAAATACAGTCACCAACGAACCCATCATCATTTCCAGTACTCGAAGGAGGTACAATCGCCTCTGTGCCGACGAATTTCTGTCACTGATTTTGTCCAATTTGAGGGAAATATGAAGGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGGTAGACGAGGAAGGCGGCGGCGGTGGTGGTGGTGGAAAGCTGCCGATCACCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCATCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTTGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGACGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCGGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAACGTAATGAAGCGATGTTGGGACGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCATCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGTCCTTGA | 1410 | 45.89 | MHGKFTRRLKSQPPIKVQPTENRYDIQYSRIQHTILEGRPIRSNQIQHTILESRPIRSNQKYSHQRTHHHFQYSKEVQSPLCRRISVTDFVQFEGNMKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKVDEEGGGGGGGGKLPITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQSQGCFCFRRYRGP | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11996809 | 12005059 | + | CmoCh11G016940.1 | Cmo11g01694 | 392313 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01694 | 469 | SMART | serkin_6 | 166 | 443 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g01694 | 469 | MobiDBLite | consensus disorder prediction | 135 | 154 | - | - | |
Cmo11g01694 | 469 | CDD | STKc_MAP3K-like | 172 | 440 | - | - | |
Cmo11g01694 | 469 | Gene3D | Transferase(Phosphotransferase) domain 1 | 266 | 456 | - | - | |
Cmo11g01694 | 469 | Pfam | Protein tyrosine and serine/threonine kinase | 168 | 440 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g01694 | 469 | ProSiteProfiles | Protein kinase domain profile. | 166 | 443 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g01694 | 469 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 97 | 463 | - | - | |
Cmo11g01694 | 469 | PRINTS | Tyrosine kinase catalytic domain signature | 367 | 389 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g01694 | 469 | PRINTS | Tyrosine kinase catalytic domain signature | 411 | 433 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g01694 | 469 | PRINTS | Tyrosine kinase catalytic domain signature | 263 | 276 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g01694 | 469 | PRINTS | Tyrosine kinase catalytic domain signature | 301 | 319 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g01694 | 469 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 97 | 463 | - | - | |
Cmo11g01694 | 469 | Gene3D | Phosphorylase Kinase; domain 1 | 154 | 249 | - | - | |
Cmo11g01694 | 469 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 307 | 319 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo11g01694 | 469 | SUPERFAMILY | Protein kinase-like (PK-like) | 153 | 440 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01395 | Cmo-Chr6:10228553 | Cmo11g01694 | Cmo-Chr11:11996809 | 0 | dispersed | |
Cmo08g00324 | Cmo-Chr8:2028972 | Cmo11g01694 | Cmo-Chr11:11996809 | 0 | dispersed | |
Cmo11g01694 | Cmo-Chr11:11996809 | Cmo17g01175 | Cmo-Chr17:9450541 | 5.69E-176 | dispersed | |
Cmo10g00138 | Cmo-Chr10:636719 | Cmo11g01694 | Cmo-Chr11:11996809 | 0 | wgd | |
Cmo11g00102 | Cmo-Chr11:544268 | Cmo11g01694 | Cmo-Chr11:11996809 | 1.41E-71 | wgd | |
Cmo11g01694 | Cmo-Chr11:11996809 | Cmo14g00661 | Cmo-Chr14:3358166 | 2.61E-45 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74690 | PF07714 | PK_Tyr_Ser-Thr | 8.50E-64 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01694 | - | - | csv:101212631 | 725.317 |