Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01694 ATGCATGGGAAATTCACGAGGCGCCTAAAATCTCAACCGCCCATCAAAGTCCAACCCACAGAAAACAGATACGACATACAATACTCTAGGATACAACATACAATACTCGAGGGTAGACCAATTAGATCAAACCAAATACAACATACAATACTCGAGAGTAGACCAATTAGATCAAACCAAAAATACAGTCACCAACGAACCCATCATCATTTCCAGTACTCGAAGGAGGTACAATCGCCTCTGTGCCGACGAATTTCTGTCACTGATTTTGTCCAATTTGAGGGAAATATGAAGGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGGTAGACGAGGAAGGCGGCGGCGGTGGTGGTGGTGGAAAGCTGCCGATCACCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCATCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTTGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGACGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCGGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAACGTAATGAAGCGATGTTGGGACGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCATCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGTCCTTGA 1410 45.89 MHGKFTRRLKSQPPIKVQPTENRYDIQYSRIQHTILEGRPIRSNQIQHTILESRPIRSNQKYSHQRTHHHFQYSKEVQSPLCRRISVTDFVQFEGNMKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKVDEEGGGGGGGGKLPITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQSQGCFCFRRYRGP 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11996809 12005059 + CmoCh11G016940.1 Cmo11g01694 392313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01694 469 SMART serkin_6 166 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01694 469 MobiDBLite consensus disorder prediction 135 154 - -
Cmo11g01694 469 CDD STKc_MAP3K-like 172 440 - -
Cmo11g01694 469 Gene3D Transferase(Phosphotransferase) domain 1 266 456 - -
Cmo11g01694 469 Pfam Protein tyrosine and serine/threonine kinase 168 440 IPR001245 GO:0004672|GO:0006468
Cmo11g01694 469 ProSiteProfiles Protein kinase domain profile. 166 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01694 469 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 97 463 - -
Cmo11g01694 469 PRINTS Tyrosine kinase catalytic domain signature 367 389 IPR001245 GO:0004672|GO:0006468
Cmo11g01694 469 PRINTS Tyrosine kinase catalytic domain signature 411 433 IPR001245 GO:0004672|GO:0006468
Cmo11g01694 469 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672|GO:0006468
Cmo11g01694 469 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672|GO:0006468
Cmo11g01694 469 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 463 - -
Cmo11g01694 469 Gene3D Phosphorylase Kinase; domain 1 154 249 - -
Cmo11g01694 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Cmo11g01694 469 SUPERFAMILY Protein kinase-like (PK-like) 153 440 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01395 Cmo-Chr6:10228553 Cmo11g01694 Cmo-Chr11:11996809 0 dispersed
Cmo08g00324 Cmo-Chr8:2028972 Cmo11g01694 Cmo-Chr11:11996809 0 dispersed
Cmo11g01694 Cmo-Chr11:11996809 Cmo17g01175 Cmo-Chr17:9450541 5.69E-176 dispersed
Cmo10g00138 Cmo-Chr10:636719 Cmo11g01694 Cmo-Chr11:11996809 0 wgd
Cmo11g00102 Cmo-Chr11:544268 Cmo11g01694 Cmo-Chr11:11996809 1.41E-71 wgd
Cmo11g01694 Cmo-Chr11:11996809 Cmo14g00661 Cmo-Chr14:3358166 2.61E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74690 PF07714 PK_Tyr_Ser-Thr 8.50E-64 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01694 - - csv:101212631 725.317