Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01702 ATGGATCTGGAGAGTGCTATTAGGGGTCACTCAATCAAGAAGGATTCTTGGAGAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGTACTTCCCCTTTGTATGTTTACAAAAGCACTTTTGCTGAGGATATTGAGCACTCTGAAACTAATGAGGAGATTTATGGGATTCTTTCTTTTGTTTTCTGGACTCTCACGCTTATTCCTTTGATTAAATACGTTTTTATTGTTCTTCGAGCTGATGATAATGGCGAGGGGGGAACTTTTGCTTTGTACTCATTGCTTTGCCGCCATGCCCGAGTTGGCTCCTTGCCTAATTGTCAGCTCGCGGATGAGGAGCTTTCTGAGTATACAAAAGATGGGGTGGATTTAACCACTAAGAACACTTGTGGGTCGAGATTGAAATCGACATTAGAGAACCATAGAGTGCTGCAGAGGGTTTTGCTTGTTCTTGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACTCCTGCCATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAACTTTCCATGGCTAAAGAACACCATCGATATGTCGAAGTCCCGGTCGCTTGTGTCATATTAGTAATCCTATTTTCACTTCAACATTATGGAACCCATCGAGTCGGGTTTCTGTTCGCACCAGTTGTAATTACCTGGCTCGTGTGTATAAGTTCGATAGGACTGTACAATATCTTCTACTGGAATCCCCATGTTTATCAAGCACTCTCCCCATATTATATGTACAAATTTTTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTGGGCGGCATCCTGTTATGTATGACAGGTTCGGAAGCAATGTTTGCTGATCTCGGCCACTTCTCGCAGCTATCTATCAAGATTGCGTTTTCTTTTGTGGTTTATCCAGCTTTGGTACTGGCATATATGGGACAAGCTGCTTATCTTTCTCAACATCACGGTGAAGAAAGTAACTATCGAATCGGATTTTACGTGTCGGTTCCTGAGAAAATAAGATGGCCTGTACTTGTGATAGCCATTTTAGCTGCGGTGGTCGGAAGTCAAGCTGTCATTACCGGGACGTTTTCGATAATAAAACAGTGCTCTGCGTTAGGCTGCTTCCCAAGGGTCAAAATTGTTCATACGTCGTCGAAAATCCACGGCCAGATTTACATACCAGAGATCAACTGGACTTTGATGATCTTGTGCTTGGCTATTACTGGTGGCTTTCGAGACACGAAACGAATGGGGAATGCATCAGGTTTAGCGGTAATAACTGTTATGCTAGTGACTACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGAACAAAAGCTTTCTCTTTGCCATTGCCTTCATACTCATTTTCGGGTTCATCGAATCACTCTACTTCTCGGCATCTCTCATCAAGTTTCAAGAAGGAGCGTGGGTTCCCATTGCCCTCTCGCTCATCTTCCTACTAGTCATGTACGTATGGCAATACGGAACGCGCAAGAAATACGAGTACGATGTTCAAAACAAAGTCTCAATCAACTGGCTCTTAGGCTTAGGTCCAAGTTTAGGCATTGTACGAGTACGAGGCATTGGTCTTATATACACCGAGCTAGTCTCAGGTATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCGGCCTTCCACCAAGTCCTAGTCTTCCTTTGTGTAAAATCCGTCCCCGTCCCACACGTGAGACCAGGAGAGAGATTCCTCGTAGGAAGAGTTGGACCAAAGGAGTACCGTCTGTATCGATGCATAGCACGATATGGATACCGCGACATCCACAAGGATGGTATCGAGTTCGAGAAGGACCTAGTGTGTAGCATTGCGGAGTTCATAAGGTCAGAGAAGGCGGAGACGAACGTGAAGGTGGAAGATTTGGAAGAGAGCGAGAGAATGACGGTGGTGGGAACGTCGTCGACACACGTAGACGGAGTGAGAATGTGTGAAGATGAAGGAGGAGGAGAGACATCAGAGGTGAGGGAGATAAAGTCAGCACAAAAGGTGAGGAAAAGAGTGAGGTTTGTTGTGCCTGAGAGCCCACAAATGGATGTGGAGGCAAGGAGAGAGCTGGAAGAGCTAATGGAAGCAAGAGAGGCAGGGATGGCTTTCATTATGGGACATTCATATGTGAAGGCAAAGAGAGGGTCAGGTTGGGTGAAGAAAATGGTGATAAATTATGGGTATGATTTCTTGAGAAGGAACTCAAGAGGGCCATCTTATGCTTGGACTGTGCCTCATGCATCTACTCTAGAGGTTGGGATGATCTACCAAGTTTGA 2316 45.42 MDLESAIRGHSIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIEHSETNEEIYGILSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVGSLPNCQLADEELSEYTKDGVDLTTKNTCGSRLKSTLENHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYVEVPVACVILVILFSLQHYGTHRVGFLFAPVVITWLVCISSIGLYNIFYWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPALVLAYMGQAAYLSQHHGEESNYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMILCLAITGGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWNKSFLFAIAFILIFGFIESLYFSASLIKFQEGAWVPIALSLIFLLVMYVWQYGTRKKYEYDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDGIEFEKDLVCSIAEFIRSEKAETNVKVEDLEESERMTVVGTSSTHVDGVRMCEDEGGGETSEVREIKSAQKVRKRVRFVVPESPQMDVEARRELEELMEAREAGMAFIMGHSYVKAKRGSGWVKKMVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12075480 12081799 + CmoCh11G017020.1 Cmo11g01702 392321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01702 771 Coils Coil 622 642 - -
Cmo11g01702 771 PANTHER POTASSIUM TRANSPORTER 6 1 771 - -
Cmo11g01702 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo11g01702 771 TIGRFAM kup: potassium uptake protein 23 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo11g01702 771 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02846 Cmo11g01702 CCT
Cmo04g02846 Cmo11g01702 ECH
Cmo11g01702 Cmo14g00647 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00710 Cmo-Chr1:3641878 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo04g00106 Cmo-Chr4:568018 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo04g01138 Cmo-Chr4:5807372 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo05g00002 Cmo-Chr5:4477 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo11g01702 Cmo-Chr11:12075480 Cmo14g00789 Cmo-Chr14:4026143 0 dispersed
Cmo17g01086 Cmo-Chr17:8972728 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo11g01702 Cmo-Chr11:12075480 Cmo14g00647 Cmo-Chr14:3259642 0 wgd
Cmo11g01702 Cmo-Chr11:12075480 Cmo15g00337 Cmo-Chr15:1558286 6.40E-159 wgd
Cmo11g01702 Cmo-Chr11:12075480 Cmo04g02846 Cmo-Chr4:20324007 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01702 K03549 - csv:101211664 1408.66