Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01705 ATGGAGAGGAGCTTGTTTTACAAAGACGTACTGCCATTCGCCGCCATGGTTGCAGCCGAGTGCGCCACCGTGGGATCCAACACAGGCTTCAAAGCCGCCACCGCCAGAGGCATGAGCTACTACGTCTTCACCCTCTATGTCTGCGTCGCCGCCGCCGTCGTCCTCATCCCTTTCGCCCTCATCTTTCACAGATCGCAACAGCTTCCGCCGAACAAGATTTCCCTGTTCTTCAAACTCGTCGCCCTCTCCGCCCTCGGGCTTTCGTGCCAATTGCTTGGGAACAAAGGATTGGAGTTCAGCTCCCCCACTCTTTCATCCGCCATTAGCAACCTCATCCCGGCGTTCACTTTCATTCTGGCCGTCTTTTTCGGGATGGAAAAGATAGATTTGAAAAGGAGCAGCAGCATAGCCAAAATTGTGGGGTCAGCAGTGTCGATATCAGGTGCATTGGTAGTGGTTCTGTACAAAGGCCCAGTTGTGATATCAAACCCATATTCTCAAGGCCCAAAAGCGTTGGGCCTTCTCTATCACAATCACAATCAACCTTTGGGCTCTTCTCATCCACAGCCCAATTGGATATTGGGTGGCCTTTGCTTTGTTTTTCAGTACCTTTCCACCTCCTTTTGGTACATTCTCCAGACCCAAATCATAAAGACATACCCAGATGAGGTAACAGTGGTGGCAGTGTACTACAGCATCCAGGCAGTTTTAACGGCGCCGGTGTGTTTGTTGGCAGAAACAGACATGAATGCTTGGAGGATGACAAATGCACTAAGCTTTGTGTTCATACTGAACTCGGGTATGATGGGTCAGGCCTTTGTGGCTGCTATCCACACTTGGGGACTCAGCTTGAAGGGGCCTGTTTATGTGTCCAGTTTTAGGCCATTGTCCATTGCCATTGCTGCTGCTATGGGTGCCATTCTTCTTGCTGATGATCTTCATCTTGGAAGTATAATTGGAGCTATCATAATATCAGTTGGATTCTATGGCATATTGTGGGGAAAGGCAAAAGAGGAAGAATTGAAAGAATTAGATGGCGGATCTTCCTCAAAAGCTCCATTGCTCCAATATTATAGAGTCGAAGATCCATGA 1092 48.72 MERSLFYKDVLPFAAMVAAECATVGSNTGFKAATARGMSYYVFTLYVCVAAAVVLIPFALIFHRSQQLPPNKISLFFKLVALSALGLSCQLLGNKGLEFSSPTLSSAISNLIPAFTFILAVFFGMEKIDLKRSSSIAKIVGSAVSISGALVVVLYKGPVVISNPYSQGPKALGLLYHNHNQPLGSSHPQPNWILGGLCFVFQYLSTSFWYILQTQIIKTYPDEVTVVAVYYSIQAVLTAPVCLLAETDMNAWRMTNALSFVFILNSGMMGQAFVAAIHTWGLSLKGPVYVSSFRPLSIAIAAAMGAILLADDLHLGSIIGAIIISVGFYGILWGKAKEEELKELDGGSSSKAPLLQYYRVEDP 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12105277 12110345 + CmoCh11G017050.1 Cmo11g01705 392324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01705 363 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0016021|GO:0022857
Cmo11g01705 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cmo11g01705 363 PANTHER WAT1-RELATED PROTEIN 10 341 - -
Cmo11g01705 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 337 - -
Cmo11g01705 363 Pfam EamA-like transporter family 23 146 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02852 Cmo11g01705 CCT
Cmo11g01705 Cmo15g00335 CCT
Cmo11g01705 Cmo15g00335 ECH
Cmo04g02852 Cmo11g01705 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02852 Cmo-Chr4:20345051 Cmo11g01705 Cmo-Chr11:12105277 1.11E-92 dispersed
Cmo11g01705 Cmo-Chr11:12105277 Cmo15g00332 Cmo-Chr15:1540074 2.29E-99 dispersed
Cmo11g01704 Cmo-Chr11:12093252 Cmo11g01705 Cmo-Chr11:12105277 5.38E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01705 - - cmax:111486393 665.225