Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01732 ATGAGCATTTTTCACCCCCCTCCTCCGCCGTCCTCCTCCTCCGCCGTGAAGTGGCTCAGCCTAGTCTCCGCCGTCTGGGTCCAATCCATCGCAGGCAACAACTACACCTTCTCCAATTACTCCGCCGCCCTCAAATCCCTCATGAACCTCTCCCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACTTAGGCAAAGCCTTTGGCCTCCTTTCCGGCCTCGCCTCCGACCGCCTCCCCCCCTCCCTCCTCCTCCTCATCGGCTCCCTCGAAGGCCTCATTGGCTACGGCGGTCAATGGCTCGTCGTCAGCAAAACAATCAACCCCCTCCCTTACTGGCAGATAAGTATTTTTATGTGCATGGGAGGGAATAGTAGCACTTGGATGAACACCGCCGTGCTCGTTACTTGCCTCAGAAACTTCCGGCGAAACATAGGCTCTGTTTCCGGCGTTCTCAAAGGTTACGTCGCTCTCAGCACCGCCATTTTCACCGATCTCTGTTTCGCCCTTTTCTCCAATGATCCCTCTTCCTTTCTCGCCCTTCTCGCCGTCGTCCCCTTCGCCGTTTGCCTCATTGCCATTCTCTTCCTCCGTGAAACCCCCTTCGCCGTCGATAACGAAACAGAGGATTCCCAGTACTTCTGGGTCCTCAACGCCATCGCCGTCGCCGTCGCCGTCAGTCTCTTGGCCTTTGATTCGATCCCCAATCCCACCTCATCCGTATCGATAATTTTCTCCATTGTGTTATTGATTCTCCTCGTTTCCCCTCTGGTAATCCCAATTCACTCATTCCTCAAGAACAGGGGCCGGTCCGGTGCGGCTGCAGAGGCGTTGTTGGCGGCTGAGGAAGTGGCGGAGGTGGAGGGAAATGGGAATCCGGTGATAGGAGAAGATCACACGATTGTGGAGGCGATGAAGACAGTTGAATTTTGGCTTCTGTTTGTGTCGTTTTTGTTTGGAGTGGGTACCGGATTGGCAGTGATGAACAACATGGGTCAAATCGGATTGGCTCTTGGATACGACGACGTTTCGAGCTTCATCTCTTTGATGAGCATTTGGGGATTTTTTGGTCGGATTTTATCGGGATCGGCATCGGAGTATTTCATCAAGAAAGCAGGGATGGCAAGGCCACTATGGAACGCAGCTTCTCAAATTCTAATGGCAATTGGCTGCATTCTCTTAGCCATTGGCATGCCTAGTTCCTTATACATCGGCTCGATCATTGTCGGTATCTGTTACGGTGTTCGTCTCGCCATCAGTGTCCCGATCGCCTCTGAAATTTTCGGGCTCAAAGACTATGGCATGATCTACAACGTTCTGATCTTCAACCTCCCACTCGGTTCGTTCCTCTTCTCGGGGCTGCTGGCCGGGATTCTCTACGACATGGAGGCGACGAAGACAGAGGAGGGTGGGAATACGTGCATGGGAGAGCATTGTTACAGGCTTGTGTTTGTGGTAATGGCTTGTTCATGTGTGGTTGGGCTTGGCGTGGACTTGCTTTTGTTCATTAGAACTAAGAGATTGTACTCCAAAATAAGAGATGGAAGGTGA 1551 52.42 MSIFHPPPPPSSSSAVKWLSLVSAVWVQSIAGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLSGLASDRLPPSLLLLIGSLEGLIGYGGQWLVVSKTINPLPYWQISIFMCMGGNSSTWMNTAVLVTCLRNFRRNIGSVSGVLKGYVALSTAIFTDLCFALFSNDPSSFLALLAVVPFAVCLIAILFLRETPFAVDNETEDSQYFWVLNAIAVAVAVSLLAFDSIPNPTSSVSIIFSIVLLILLVSPLVIPIHSFLKNRGRSGAAAEALLAAEEVAEVEGNGNPVIGEDHTIVEAMKTVEFWLLFVSFLFGVGTGLAVMNNMGQIGLALGYDDVSSFISLMSIWGFFGRILSGSASEYFIKKAGMARPLWNAASQILMAIGCILLAIGMPSSLYIGSIIVGICYGVRLAISVPIASEIFGLKDYGMIYNVLIFNLPLGSFLFSGLLAGILYDMEATKTEEGGNTCMGEHCYRLVFVVMACSCVVGLGVDLLLFIRTKRLYSKIRDGR 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12254138 12256539 + CmoCh11G017320.1 Cmo11g01732 392351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01732 516 Pfam Nodulin-like 17 261 IPR010658 -
Cmo11g01732 516 Gene3D MFS general substrate transporter like domains 303 509 IPR036259 -
Cmo11g01732 516 Gene3D MFS general substrate transporter like domains 15 208 IPR036259 -
Cmo11g01732 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 279 - -
Cmo11g01732 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 282 513 - -
Cmo11g01732 516 SUPERFAMILY MFS general substrate transporter 8 507 IPR036259 -
Cmo11g01732 516 CDD MFS_Mch1p_like 17 495 - -
Cmo11g01732 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 282 513 - -
Cmo11g01732 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 10 279 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00245 Cmo11g01732 CCT
Cmo11g01732 Cmo20g00758 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00245 Cmo-Chr2:1149456 Cmo11g01732 Cmo-Chr11:12254138 0 dispersed
Cmo11g01732 Cmo-Chr11:12254138 Cmo14g01400 Cmo-Chr14:11493196 1.24E-107 dispersed
Cmo11g01732 Cmo-Chr11:12254138 Cmo20g00758 Cmo-Chr20:3808290 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01732 - - cmo:103490296 755.747