Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01758 ATGTGTCTTCATATAAATACCGTTTTTGGTTCTGGTTTTGGGTTTCTTTTCTCACAATCAACCGTTGTTTTGCTTTTTCACGTAAAACCTTCGTCTGCAAACGAAAGCGAGAGAGAAAGAGAGATCGAAAGCTTGTCGCATTTTATTCTCTTTGGCTTTTGCTTTCTACATTTTTCCCTAATGGTTATGGAGGATAACGAGAGCTGTGGAAGTAGAGCGTACGGCTCCTTGTCGCCGGCGCAGTCTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTTCGCCGTCTGAAGGATTCCGTCAACGAGGAGACGCTTCAGCCTGGTTTCGATGACGAACTATGGCTTCACTTTAATCGCCTTCCTACTCGATATGCTCTCGATGTAAATGTGGAGAGGGCAGAAGACGTTCTCATGCATAAAAGATTATTGCAATGTGCTCACGATCCTGCAAATCGACCTGCAATTGAAGTTCGCCTAGTGCAGGTCCAAGCCATTTCTGATGGGAATTCAGCTGATTTTGCTGCTTCCGGTCCTGTAAAAGACACAGATCATAATTCTTCAAATTTACCGAGCAGGCAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCCAACCTTGAAGCCCTCGCCCTTGAAGCTAATAATGCTCAGGATCAGGAGGTTGATCATTCCGTACATGCCAAAACACAATCTTTCCGGCCGATGCATGAAATAACTTTCTCTACGGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGTCTGAATATCCAGGAGGCACATGCATTTTCCACTGTTGATGGTTACTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCGATAGAGAAGGAAATCATACAGAGGAAGGCTTGGCCAAATCATAAATCCTTTTCAATAAGGGAACGGGATATATCAATTAAACCTGATCCTGATCGTGTGGAAATTCCCACGGATGGGACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTCGAGCATAAAGTTGCATCTGGGTCATATGGAGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTCGCTATTAAAGTCCTTAAACCTGAACGCGTAGATTCAGATATGCAAAGTGAGTTTGCCCAGGAGGTGTACATTATGAGAAAAGTCAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGTACTAAACCTCCAAGCTTGTGCATAGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCCTTGCTCAAGGTAGCCATTGATGTTTCTAAGGGAATGAACTACTTGCACCAAAATAACATCATTCACAGAGATCTCAAGGCCGCTAATCTTTTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGCGTCGCCAGAGTGAAAGCTCAATCAGGAGTCATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGCAATTGTCTTGTGGGAGCTGCTTACTGGAAAGCTACCCTATGAATTCCTTACTCCATTACAAGCTGCAGTCGGAGTGGTACAAAAGGGTTTACGGCCTATTATTCCAAAGCACACTAATCCGAAGCTGGCTGAGTTGCTGGAAAAATGCTGGCAACAAGACCCCTCATGCAGGCCTGACTTCTCTGAAATTATCGACATATTGTTGCAGATAACTAAGGAAGTTGCAGAAGATGGCGACGAACGACGGAAGGAGAAGAGTGGAGGATTACTTTCTGTGTTGAGACGAAACCACAATGAGAAGTGA 1899 44.02 MCLHINTVFGSGFGFLFSQSTVVLLFHVKPSSANESEREREIESLSHFILFGFCFLHFSLMVMEDNESCGSRAYGSLSPAQSRQQRQKFEVYNEVLRRLKDSVNEETLQPGFDDELWLHFNRLPTRYALDVNVERAEDVLMHKRLLQCAHDPANRPAIEVRLVQVQAISDGNSADFAASGPVKDTDHNSSNLPSRQSIHPPPAFGSSPNLEALALEANNAQDQEVDHSVHAKTQSFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTAIEKEIIQRKAWPNHKSFSIRERDISIKPDPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERVDSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPIIPKHTNPKLAELLEKCWQQDPSCRPDFSEIIDILLQITKEVAEDGDERRKEKSGGLLSVLRRNHNEK 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12398386 12405291 - CmoCh11G017580.1 Cmo11g01758 392377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01758 632 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 78 613 - -
Cmo11g01758 632 Pfam Protein tyrosine and serine/threonine kinase 350 598 IPR001245 GO:0004672|GO:0006468
Cmo11g01758 632 CDD STKc_MAP3K-like 356 599 - -
Cmo11g01758 632 ProSiteProfiles ACT domain profile. 241 311 IPR002912 -
Cmo11g01758 632 MobiDBLite consensus disorder prediction 173 208 - -
Cmo11g01758 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Cmo11g01758 632 PRINTS Tyrosine kinase catalytic domain signature 461 479 IPR001245 GO:0004672|GO:0006468
Cmo11g01758 632 PRINTS Tyrosine kinase catalytic domain signature 526 548 IPR001245 GO:0004672|GO:0006468
Cmo11g01758 632 PRINTS Tyrosine kinase catalytic domain signature 570 592 IPR001245 GO:0004672|GO:0006468
Cmo11g01758 632 PRINTS Tyrosine kinase catalytic domain signature 507 517 IPR001245 GO:0004672|GO:0006468
Cmo11g01758 632 PRINTS Tyrosine kinase catalytic domain signature 424 437 IPR001245 GO:0004672|GO:0006468
Cmo11g01758 632 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Cmo11g01758 632 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 78 613 - -
Cmo11g01758 632 SUPERFAMILY Protein kinase-like (PK-like) 329 599 IPR011009 -
Cmo11g01758 632 SUPERFAMILY ACT-like 239 303 IPR045865 -
Cmo11g01758 632 MobiDBLite consensus disorder prediction 609 632 - -
Cmo11g01758 632 MobiDBLite consensus disorder prediction 183 203 - -
Cmo11g01758 632 CDD ACT_TyrKc 239 305 - -
Cmo11g01758 632 ProSiteProfiles Protein kinase domain profile. 350 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01758 632 SMART serkin_6 350 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01758 632 Gene3D Phosphorylase Kinase; domain 1 340 428 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01758 Cmo19g00771 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g02052 Cmo-Chr1:14338856 Cmo11g01758 Cmo-Chr11:12398386 8.97E-41 dispersed
Cmo01g02053 Cmo-Chr1:14343989 Cmo11g01758 Cmo-Chr11:12398386 8.38E-56 dispersed
Cmo11g01758 Cmo-Chr11:12398386 Cmo16g01308 Cmo-Chr16:9294327 1.68E-27 dispersed
Cmo20g00274 Cmo-Chr20:1334263 Cmo11g01758 Cmo-Chr11:12398386 1.27E-49 dispersed
Cmo11g01758 Cmo-Chr11:12398386 Cmo19g00771 Cmo-Chr19:7783849 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74692 PF07714 PK_Tyr_Ser-Thr 2.40E-73 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01758 - - csv:101213048 1029.62