Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01793 | ATGAGAGAGGTTGAAGGAAGAAGGCTATGCCAGGAGTTTTCAGCTGGGTATTATGGCCTTTGTACTGTTGGGGGAATGCTCAGTGCTGGGGCTACCCATCTTGCTCTTACGCCTCTTGATGTCTTGAAGGTTAATATGCAGGTGAATCCTATTAAGTACAATGGCATTTCTTCTGGTTTTTCGGTTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGAGGTTGGTCCGGCAAGTTATTCGGATATGGCGTTCAAGGCGGGTTCAAATTCGGTCTCTACGAGTACTTCAAGAAGTCTTACTCTGATTTGTTGGAAGGCCACAGCAGAAGTTCCATATACTTTCTCAGTAGTGCTTCTGCTCAATTCTTTGCTGATGTTGCTCTCTGCCCTTTTGAAGCTGTCAAGGTCAGAGTCCAAACACAGCCCTATTATGCCAAGGGATTGGCTGATGGCTTTCCAAAGCTATACTACAGTGAAGGTCTTTCTGGTTTCTACCGAGGTCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCCATGGTTATGTTCTCGACATTTGAGCATTCGGTGGACTTCATATATCGAAAGATCATTCAGCATAGAAAGGAAGATTGCTCGAGAACGCAACAGCTTGGTGTTACATGTTTGGCTGGCTATGCAGCTGGAGCTGTTAGTACTATTGTCTCGAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAAAAGGCTGATAGTATAGTGCAGGCAGTGAAGAACATAGGATTTGGCAATCTATTTACTAGAAGTCTCCCTGTCAGAATTGCACTTGTTGGTCCTCTTGTTACATCGCAATGGTTCATTTATGACACAATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGGTCAACAGGCAATTGGAAGAAGCTTAG | 918 | 44.01 | MREVEGRRLCQEFSAGYYGLCTVGGMLSAGATHLALTPLDVLKVNMQVNPIKYNGISSGFSVLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKSYSDLLEGHSRSSIYFLSSASAQFFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMVMFSTFEHSVDFIYRKIIQHRKEDCSRTQQLGVTCLAGYAAGAVSTIVSNPADNIVSSLYNKKADSIVQAVKNIGFGNLFTRSLPVRIALVGPLVTSQWFIYDTIKVLSGLPTSGGVNRQLEEA | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12593842 | 12599246 | + | CmoCh11G017930.1 | Cmo11g01793 | 392412 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01793 | 305 | SUPERFAMILY | Mitochondrial carrier | 21 | 285 | IPR023395 | - | |
Cmo11g01793 | 305 | Pfam | Mitochondrial carrier protein | 23 | 101 | IPR018108 | - | |
Cmo11g01793 | 305 | Pfam | Mitochondrial carrier protein | 114 | 196 | IPR018108 | - | |
Cmo11g01793 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 193 | IPR018108 | - | |
Cmo11g01793 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 210 | 289 | IPR018108 | - | |
Cmo11g01793 | 305 | Gene3D | Mitochondrial carrier domain | 21 | 289 | IPR023395 | - | |
Cmo11g01793 | 305 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 6 | 304 | IPR044677 | GO:0005315|GO:1990547 | |
Cmo11g01793 | 305 | PANTHER | MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL | 6 | 304 | - | - | |
Cmo11g01793 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 16 | 100 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01793 | Cmo-Chr11:12593842 | Cmo15g00842 | Cmo-Chr15:4272535 | 6.36E-109 | dispersed | |
Cmo11g01793 | Cmo-Chr11:12593842 | Cmo11g01578 | Cmo-Chr11:11333119 | 7.88E-111 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01793 | K15102 | - | csv:101219895 | 563.918 |