Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01793 ATGAGAGAGGTTGAAGGAAGAAGGCTATGCCAGGAGTTTTCAGCTGGGTATTATGGCCTTTGTACTGTTGGGGGAATGCTCAGTGCTGGGGCTACCCATCTTGCTCTTACGCCTCTTGATGTCTTGAAGGTTAATATGCAGGTGAATCCTATTAAGTACAATGGCATTTCTTCTGGTTTTTCGGTTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGAGGTTGGTCCGGCAAGTTATTCGGATATGGCGTTCAAGGCGGGTTCAAATTCGGTCTCTACGAGTACTTCAAGAAGTCTTACTCTGATTTGTTGGAAGGCCACAGCAGAAGTTCCATATACTTTCTCAGTAGTGCTTCTGCTCAATTCTTTGCTGATGTTGCTCTCTGCCCTTTTGAAGCTGTCAAGGTCAGAGTCCAAACACAGCCCTATTATGCCAAGGGATTGGCTGATGGCTTTCCAAAGCTATACTACAGTGAAGGTCTTTCTGGTTTCTACCGAGGTCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCCATGGTTATGTTCTCGACATTTGAGCATTCGGTGGACTTCATATATCGAAAGATCATTCAGCATAGAAAGGAAGATTGCTCGAGAACGCAACAGCTTGGTGTTACATGTTTGGCTGGCTATGCAGCTGGAGCTGTTAGTACTATTGTCTCGAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAAAAGGCTGATAGTATAGTGCAGGCAGTGAAGAACATAGGATTTGGCAATCTATTTACTAGAAGTCTCCCTGTCAGAATTGCACTTGTTGGTCCTCTTGTTACATCGCAATGGTTCATTTATGACACAATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGGTCAACAGGCAATTGGAAGAAGCTTAG 918 44.01 MREVEGRRLCQEFSAGYYGLCTVGGMLSAGATHLALTPLDVLKVNMQVNPIKYNGISSGFSVLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKSYSDLLEGHSRSSIYFLSSASAQFFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMVMFSTFEHSVDFIYRKIIQHRKEDCSRTQQLGVTCLAGYAAGAVSTIVSNPADNIVSSLYNKKADSIVQAVKNIGFGNLFTRSLPVRIALVGPLVTSQWFIYDTIKVLSGLPTSGGVNRQLEEA 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12593842 12599246 + CmoCh11G017930.1 Cmo11g01793 392412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01793 305 SUPERFAMILY Mitochondrial carrier 21 285 IPR023395 -
Cmo11g01793 305 Pfam Mitochondrial carrier protein 23 101 IPR018108 -
Cmo11g01793 305 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Cmo11g01793 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Cmo11g01793 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
Cmo11g01793 305 Gene3D Mitochondrial carrier domain 21 289 IPR023395 -
Cmo11g01793 305 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 304 IPR044677 GO:0005315|GO:1990547
Cmo11g01793 305 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 6 304 - -
Cmo11g01793 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01793 Cmo-Chr11:12593842 Cmo15g00842 Cmo-Chr15:4272535 6.36E-109 dispersed
Cmo11g01793 Cmo-Chr11:12593842 Cmo11g01578 Cmo-Chr11:11333119 7.88E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01793 K15102 - csv:101219895 563.918