Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01840 ATGCTTCTTTCTCCGGGTCACTCTCCCCGACATATCTCATCCCCCTCGCCGTCGACGGTTTCCGAGAATGCGATCCAAAATCTGCCGAGTTCGTCTTCGATTACGCCTCGGAGCTCTGGGAAACATCCCAAGGTTCTTGATGAGGATGCCTATGTAGAAGCGATAGAGAATATTATAGAGCGGGATTACTTTCCCGACATCTCGAAGCTCAGAGATCGTCTCGATTGGCTTGAAGCGATTAAAAGTGAAGACCCGATTCTAATTCGAGATGCGCAGTTGAAGATCATGGAGCGTCGTGGCCAGAAGGTTAAACGTTTGAATCCTGATGGTAAGTCCCAGACACCTGGTTCCACTTTTATGAGAAGTTTTACCTCTTTTGATGGATTTGAGGGTAAAACCCCGAAAACCCCCCTCTTTGGTAAAAGTGGAATTGCCGGTGAAACGGAGGAGGGTGGTTGTGATGGTAAGGTGGTGGATGAATCGTTGTCGCTTGATGAGTTTTTTAGGCAATATACGAGCGAGGATAATTTTAGCTTTTCCAAAATTCTTGACAAAGATAATAGGAAGAGGAAGGAGAGATACGCATATTTGACGGAGGGTGAAAAGGAAGTTATGAAGTCAATTGAGGATGTAAAAAGAGATAGAATAACTGATGGTTATGGGACTTCCGATCAGCCGCCAAGTACCTTGGAAGGATGGAAGTATACTGCAAAAAATTTGTTGATGTATCATCCATCCGACAGAGGTGAGGCTCCACTGACAGAGGAAGAAATGGCTGTTAGATTGAAGGGCCTTACCAAAGAAATTAACCGATCTAGCACTCGGTTCCATGGTAAATTGATGGACTCAAGGCCAAAAGGTGATGGTACAGTTGAAGTGCTTTATACCCCAGTGGCTGGATCTACTCCATATCCTGTGTCGAATAGAGACGGCGATAGATTGAAGAAGTATGATTTGGAGGATTTAAGGAAGACCCCAAATCCATTTTATGTAGAATCAGGGAAAAAGGCTGAGAACGGCTACGGTTTTGTCCGAACGCCGTCCCCTGCACCTGGTGTTGATGAATCTCCATTTATCACGTGGGGTGAGATTGAAGGAACACCCCTGAGACTTGATCCTGAGGAGACGCCTATTGACATTGGTGGTACAGTTGATGGGCCACGTTATAATATTCCTTGTCCACCTGCAAGAGATGAGAAGGCTCATTCACTTTCAAGGGAGGCTGCACGAAAGCTAAGGGAGAAATCAAAGATGTTTCAGAAGCCACCGTTGCCATCACCCGTTAGAGGGGGAAGTGCGAGCCCAAGTGTTCGAAGGACCCTCTCTCCAGCTGCCCAGAAGTTTGTAAGGAATGCAATAGCCAAGTCGACATCTTCATTTGATGAAACCCTTCGTGCCAGTTACAGAGGTCGAAGCCCGAGTTCAGCAACCCCTAAAAGCGGGAGGAGTTTGTCTAGATTTGCAAGAGATGGGAGCTTTGGATCTAGGTCACCTTCTGTTAAAGAAGGTTCTAATCCTGCTTGGGAATTTTCTGCTGAGCACCGTATCTCACTCTGCAGTGAACTTCACAAAAGTAAGTTTTGGGGATTGAGAAAATGCTGCGAGAAAGCAAGCGCCGCCCTCTTTCCAAAGCATTCTCCCGAGCTTTCAGAAGCCGTGCCGTCATGGGTTTTGGTTCTCCGTCAGATCTGA 1692 46.57 MLLSPGHSPRHISSPSPSTVSENAIQNLPSSSSITPRSSGKHPKVLDEDAYVEAIENIIERDYFPDISKLRDRLDWLEAIKSEDPILIRDAQLKIMERRGQKVKRLNPDGKSQTPGSTFMRSFTSFDGFEGKTPKTPLFGKSGIAGETEEGGCDGKVVDESLSLDEFFRQYTSEDNFSFSKILDKDNRKRKERYAYLTEGEKEVMKSIEDVKRDRITDGYGTSDQPPSTLEGWKYTAKNLLMYHPSDRGEAPLTEEEMAVRLKGLTKEINRSSTRFHGKLMDSRPKGDGTVEVLYTPVAGSTPYPVSNRDGDRLKKYDLEDLRKTPNPFYVESGKKAENGYGFVRTPSPAPGVDESPFITWGEIEGTPLRLDPEETPIDIGGTVDGPRYNIPCPPARDEKAHSLSREAARKLREKSKMFQKPPLPSPVRGGSASPSVRRTLSPAAQKFVRNAIAKSTSSFDETLRASYRGRSPSSATPKSGRSLSRFARDGSFGSRSPSVKEGSNPAWEFSAEHRISLCSELHKSKFWGLRKCCEKASAALFPKHSPELSEAVPSWVLVLRQI 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12843736 12846066 + CmoCh11G018400.1 Cmo11g01840 392459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01840 563 MobiDBLite consensus disorder prediction 1 46 - -
Cmo11g01840 563 MobiDBLite consensus disorder prediction 413 438 - -
Cmo11g01840 563 Pfam Nuclear protein Es2 43 448 IPR019148 -
Cmo11g01840 563 MobiDBLite consensus disorder prediction 9 39 - -
Cmo11g01840 563 PANTHER ES-2 PROTEIN - RELATED 1 498 IPR019148 -
Cmo11g01840 563 PANTHER BNAA05G29860D PROTEIN 1 498 - -
Cmo11g01840 563 MobiDBLite consensus disorder prediction 464 505 - -
Cmo11g01840 563 MobiDBLite consensus disorder prediction 464 482 - -
Cmo11g01840 563 MobiDBLite consensus disorder prediction 368 388 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00223 Cmo11g01840 CCT
Cmo11g01840 Cmo20g00670 CCT
Cmo02g00223 Cmo11g01840 ECH
Cmo11g01840 Cmo20g00670 ECH
Cmo11g01840 Cmo19g00886 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01840 Cmo-Chr11:12843736 Cmo19g00886 Cmo-Chr19:8428070 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01840 K13118 - csv:101212240 931.013