Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01885 ATGAACTCCCGATTTGGGTTTTTGTTATTGGTTTTGATATCTGTTCTTCTGGGTGCTGATTCAAAGTGCCCTAGAACATGCGATGTAGCTTTGGGTTCGTATTTAGTATGGCAGGGAAGCAATTTGAGTTTGATATCCAATCTGTTCGGCGTGCAATCCCCTGATACCATTGTGAGCTACAACAGAGATAAAGTTCCCAACAAAGACACCATTACTAGCGGCGATAGGATCAACATTCCATTCTCCTGCGGCTGTATTAACGATGCTTTTCTGGGTCATATGTTTCAGTACAGGATTAACACTGGAGATAGCTACAATCAAATTGCGACCAAATTCTACGCGGGCTTGACTACGGTGGACATGTTACAGAGATTCAATAATTTTGATGTTAGTCGGCTTCCTATAGATGGAATTTTGAATGTAGTGGTGAACTGTTCTTGTGGGGATCCTGATGTTTCCAAGGATTATGGGTTGTTCATCACTTACCCACTTGGATCAAATGATAGTTGGGCTAATTTGGAACGAGATACAAATATCAGCTCGAATTTGCTGCAGCAGTACAATCAGGGTGTGAATTTCAGCGCAGGAAATTTGATCTTTATTCCAGGCAGAGATCAAAGTGGCAGCTACCCACCTCTGAACATAAGCACAGGACTTGCAGGTGGAGCCATTGCTGGCTTAGTTATTGGTGTAGTTCTTGGGGTCTTACTTGTAGCAGGCGTCGTTTACATCGTCGTTCGAAGGGGGAAGTCGAAAAGGTCTACATTGCTGGTGTCCTCCCAAGATTTATCTTCTCAAGATGGGCATGGTCTCGTGACGGGAAGTTCCATGGATAAGTCTACTGAATCAAATGGTCGAGGTGGTGGTATAGCTGCAGTCACAAATATTACTGTGGAAAAATCAGTGGAATTCTCATACGAAGAGCTTGCGAAGGCGACCGATAACTTTAGTTTGGCGAACAAAATCGGTGAAGGTGGTTTTGGATCGGTTTACTATGCAGAACTCAGAGGAGAGAAAGCAGCAATAAAGAAGATGGATATGGAAGCTACAAGGGAGTTCCTCGCCGAAATTAAAGTTCTAACACGCGTTCACCACTTGAACCTGGTGCGTTTGATAGGATATTGTGTTGAGAATTCTCTATTCCTAGTCTATGAGTTCATTGAGAATGGCAATTTAGGCCAACATTTACGTGGCACTGGTCGGGATCCGTTGCCCTGGCATACTAGGGTCCAAGTCGCGCTTGATTCAGCTCGAGGTCTTGAGTATATCCATGAGCACACCGTGCCCGTTTATATTCATCGTGATATCAAATCAGCCAATATATTGATTGACAAGAACTTTCATGGAAAGGTTGCGGATTTCGGGTTAACCAAGTTGACTGAAGTTGGTAATTCGTCTCTTCCCACTCGTCTTGTGGGCACATTTGGATATATGCCACCGGAATATGCACAATATGGTGACGTTTCTCCAAAGATCGACGTATATGCTTTTGGTGTCGTTCTTTACGAGCTTATTTCAGCCAAGGAAGCTGTGGTTAAGACAAACAGAGCCAGCGCGATTAACGAGTCAAAAGGCCTCGTCGCTTTGTTTGAAGATGTACTGAATCAACCCGACGCAAAGGAGAACCTACACAAACTAGTCGACCCAAGACTCAAAGAGAACTACCCGCTCGATTCGGTTTTCAAGATGGCTCAACTTGCCAGAGCATGTACACATGAAAATCCACAGCTACGCCCAAGCATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCCGCAACAGAAGATTGGGATGTTGGCTCGTTCTACGAAAACCAAGCCCTCGTCAACTTAATGTCGGGAAGGTAG 1851 44.41 MNSRFGFLLLVLISVLLGADSKCPRTCDVALGSYLVWQGSNLSLISNLFGVQSPDTIVSYNRDKVPNKDTITSGDRINIPFSCGCINDAFLGHMFQYRINTGDSYNQIATKFYAGLTTVDMLQRFNNFDVSRLPIDGILNVVVNCSCGDPDVSKDYGLFITYPLGSNDSWANLERDTNISSNLLQQYNQGVNFSAGNLIFIPGRDQSGSYPPLNISTGLAGGAIAGLVIGVVLGVLLVAGVVYIVVRRGKSKRSTLLVSSQDLSSQDGHGLVTGSSMDKSTESNGRGGGIAAVTNITVEKSVEFSYEELAKATDNFSLANKIGEGGFGSVYYAELRGEKAAIKKMDMEATREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEFIENGNLGQHLRGTGRDPLPWHTRVQVALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRASAINESKGLVALFEDVLNQPDAKENLHKLVDPRLKENYPLDSVFKMAQLARACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13119060 13124405 + CmoCh11G018850.1 Cmo11g01885 392504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01885 616 Gene3D Phosphorylase Kinase; domain 1 301 386 - -
Cmo11g01885 616 Gene3D Transferase(Phosphotransferase) domain 1 387 607 - -
Cmo11g01885 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 616 IPR044812 GO:0019199|GO:0045087
Cmo11g01885 616 Pfam Protein kinase domain 318 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01885 616 SMART LysM_2 33 80 IPR018392 -
Cmo11g01885 616 SMART LysM_2 96 142 IPR018392 -
Cmo11g01885 616 SUPERFAMILY Protein kinase-like (PK-like) 299 588 IPR011009 -
Cmo11g01885 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Cmo11g01885 616 Pfam LysM domain 97 133 IPR018392 -
Cmo11g01885 616 SMART serkin_6 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01885 616 ProSiteProfiles LysM domain profile. 32 79 IPR018392 -
Cmo11g01885 616 MobiDBLite consensus disorder prediction 264 286 - -
Cmo11g01885 616 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Cmo11g01885 616 ProSiteProfiles Protein kinase domain profile. 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01885 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 5 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01841 Cmo-Chr4:9256898 Cmo11g01885 Cmo-Chr11:13119060 1.33E-87 dispersed
Cmo11g01885 Cmo-Chr11:13119060 Cmo15g00209 Cmo-Chr15:1017698 6.82E-73 dispersed
Cmo14g01807 Cmo-Chr14:13827129 Cmo11g01885 Cmo-Chr11:13119060 1.23E-65 dispersed
Cmo11g01885 Cmo-Chr11:13119060 Cmo14g01324 Cmo-Chr14:11058469 4.62E-92 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74697 PF00069 Pkinase 3.70E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01885 - K13429 csv:101203576 1004.59