Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01911 ATGCTCGCCTCGTCTCTCCCGAACATCGCCGAAGCATACGGCTTGTCGTCTAAGTTTTATCGGTACACCTGCCCCGGGTTAGAGTATACTGTCGCCAAAACTGTGGCTTTGTATATTCAAAAACAACCTACTCTAGCAGCTTCTTTATTGAGGATGCACTTCCACGACTGCTTCGTTAGGGGTTGTGACGGTTCTGTGCTGCTAAATTCGACACCAAACAACCAAGCCGAGAAAGATTCTATTCCCAACCTTACTTTAAGAGGCTACAATGTCGTCGACGCTGTTAAAGCTGCTGTTGAAAAGCAGTGCCCTGGCGTTGTTTCATGTGCTGATATCCTCGCTTTGGTGGCTCGTGATGCCGTTAGAATGATTGGAGGCCCATTCTGGAATGTTCCAACAGGGAGAAGAGACGGAACTGTGTCGATCTCAAGAGAAGCCCTAATCAATTTGCCGCCTCCCTTCGCCAACATCTCATCTCTCAAAACAAGTTTCCTCTCCCTAGGTCTCTCCGTCAAAGATCTCGTCGTTTTATCCGGAGCACACACGATCGGAGTTTCGAAATGCAGCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCATAGGCGACGCCGATCCGAAATTAGACAAATACTACGCCGTCGCATTGAAAGGTAAATGCAAGCCAAACGACCAGAAATCGATCGTCGAGATGGATCCAGGAAGCTTCAAGACCTTCGATGGAAGTTACTACACTCTCGTCTCCAAGAGAAGAGGTTTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGACACCAAAGCCTACGTTGTATTACAAGCACAAACACGCGGCGCTACTTTCGCCGTCGATTTCGCTGAATCGATGATCAGTATGGGACAGATCGGCGTCCTCACCGGCAACGACGGCGAAATTAGGCGCCAATGA 927 49.41 MLASSLPNIAEAYGLSSKFYRYTCPGLEYTVAKTVALYIQKQPTLAASLLRMHFHDCFVRGCDGSVLLNSTPNNQAEKDSIPNLTLRGYNVVDAVKAAVEKQCPGVVSCADILALVARDAVRMIGGPFWNVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSLGLSVKDLVVLSGAHTIGVSKCSSFSNRLYNFTGIGDADPKLDKYYAVALKGKCKPNDQKSIVEMDPGSFKTFDGSYYTLVSKRRGLFQSDSALLDDPDTKAYVVLQAQTRGATFAVDFAESMISMGQIGVLTGNDGEIRRQ 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13273050 13278750 + CmoCh11G019110.1 Cmo11g01911 392530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01911 308 PANTHER PEROXIDASE 25-RELATED 9 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Cmo11g01911 308 Gene3D - 18 308 - -
Cmo11g01911 308 CDD secretory_peroxidase 14 308 IPR033905 GO:0004601|GO:0042744
Cmo11g01911 308 SUPERFAMILY Heme-dependent peroxidases 14 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 Gene3D Peroxidase, domain 2 151 292 - -
Cmo11g01911 308 ProSiteProfiles Plant heme peroxidase family profile. 14 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 Pfam Peroxidase 32 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601
Cmo11g01911 308 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01911 308 PANTHER PEROXIDASE 9 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01170 Cmo-Chr8:7444955 Cmo11g01911 Cmo-Chr11:13273050 1.34E-98 dispersed
Cmo11g01911 Cmo-Chr11:13273050 Cmo18g01236 Cmo-Chr18:12206483 4.76E-88 dispersed
Cmo18g00674 Cmo-Chr18:8586581 Cmo11g01911 Cmo-Chr11:13273050 5.36E-72 transposed
Cmo19g01131 Cmo-Chr19:9580172 Cmo11g01911 Cmo-Chr11:13273050 1.18E-71 transposed
Cmo11g01911 Cmo-Chr11:13273050 Cmo02g00159 Cmo-Chr2:771614 2.22E-117 wgd
Cmo11g01911 Cmo-Chr11:13273050 Cmo20g00612 Cmo-Chr20:3001453 2.57E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01911 K00430 - csv:101219177 516.538