Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01966 | ATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTGGAGGAAAGAAATTTACTCTCTGTTGGGTACAAGAATGTGGTTGGTGCAAGGAGAGCCTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAACAAATGCCAAACGCATCAAGGAGTACAGACAAAAGGTTGAAACAGAGCTCTCTGGTATTTGTACTGATATCATGACAGTGATTGACGAACACCTAATTCCCTCTGCTTCAGCTGGGGAATCAACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACTAGCTCAGCCGAATCTGAATTGCCTCCTACACATCCTATCCGCTTGGGTTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATCCTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGGAGCCATCTCCGAACTTGACACCCTCAATGAGGAGTCTTACAAAGATAGCACCTTAATCATGCAGCTTCTTAGAGACAACCTCACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCTCAAAAGGTCAACGGCACTGTCAAAGTTGCCGGTGGCGACGATGAGCTTGCTCTGGCATTTCAATCTTCGAGAAGGAAGAAATTGGCAAGCCAACTGATTCAAATCGAACAAGAATTTTGCAGTTGGCATACATTCAGCGTTATCCGCATTGAAGTAATCGTCAAAACCCACCGTTTCCGTCCTTTTTCATTGTTCAATCTCCGCGAAGAACAGAGCAGAGCGGAAATAACCACAATCTGTCTTCTGGACGATCGGAAATATCCAATCTCACTCCCAACTTGCGAAGGCGATCGTTCTTCCTCTCTCACATTCCATCTGTATCGAATTCTGATTCTGAGATGTGCTCCCAATTCCGTTCGTGGATTATTCACCGATCTATTTCATTCACTCGCAGACTTAATTTCAGATTTATTACCTTCGATTGCGATGAATTCCTTTGATTCTGAACTTGGTAGAGCTTCTGCCGTGATTCTCGATCTCGATGGAACCCTTTTGGACACTGAGAGGGCGACAAAAGACGTGTTGAAGGATTTCTTGGCAAAATATGGAAAGGATTTGGATAAAAAGAGGGAAGAGGAGAAGAGATTGGGAATGACTCAGAAAGAATCAGCGGCTGCAATCATCAATGCTAATTTGAGTGATTATAGCTATAATGTTGTTTTCCAGCTTCCCGGTTGGAAGGATTGGTTCTCTGTGATTCTTGGTAGTGACCAGGTTATTCAAGGGAAACCTGCTCCTTATCTATTTGAAGAGGCAGCGAAGAGGATGGGCGTAGATGCTTCTCATTGTTTGGTCATTGAAGATTCCTTGGTTGGTGTCAAAGCAGCCAAGGCTGCCAAGATGAAGGTTGTAGCTGTCCCATCCCATGGAGAAGTTGAATGCTCTTCCCTAGCAGATAAAGTGCTTCATTCTTTACTAGAATTTCAGCCTGAGCTGTGGGGTCTTCCCCCATTTGAAGACTGGGTAGATAGGAGCTTACCTATTGATCCAATACATCTGAGCTCTCAATATGTTAATGGGTCCATAAGTGAAATCTCAGATCATGATGAGTTTAATGCATGGTTTTCAGAGGATCCATCATTGCCCGACCAAGTTTTTGGAACGTTCATCGGTTGGGCTGGCACTGGTACGGCTTGGACCATCAAGGTTGTGGTTAACATCGGATGGAATTGCAGTTCCTGTACTAAACAGAAAAGGATTTGGAAACTATGGCCAGTGGACGGATGCGATAGCAAAGTATTTGAGCAGCAAATGCAACTCATGCTTGTTGGCTACATCTGCAGATTGAATTGCAAGGATCTTGCAACCATGGATGCGAGAGAGATTGAAGAGTTCAAGTATATAGCGAACACTTTGCTCGACCAACCCATGTTTGTCAACGGTTCTTGCACATCTCTTACTGCAGAAGCAACTTCTGGCATGGATGAATAA | 2091 | 43.28 | MVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVETELSGICTDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDGAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKVNGTVKVAGGDDELALAFQSSRRKKLASQLIQIEQEFCSWHTFSVIRIEVIVKTHRFRPFSLFNLREEQSRAEITTICLLDDRKYPISLPTCEGDRSSSLTFHLYRILILRCAPNSVRGLFTDLFHSLADLISDLLPSIAMNSFDSELGRASAVILDLDGTLLDTERATKDVLKDFLAKYGKDLDKKREEEKRLGMTQKESAAAIINANLSDYSYNVVFQLPGWKDWFSVILGSDQVIQGKPAPYLFEEAAKRMGVDASHCLVIEDSLVGVKAAKAAKMKVVAVPSHGEVECSSLADKVLHSLLEFQPELWGLPPFEDWVDRSLPIDPIHLSSQYVNGSISEISDHDEFNAWFSEDPSLPDQVFGTFIGWAGTGTAWTIKVVVNIGWNCSSCTKQKRIWKLWPVDGCDSKVFEQQMQLMLVGYICRLNCKDLATMDAREIEEFKYIANTLLDQPMFVNGSCTSLTAEATSGMDE | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13528927 | 13538227 | - | CmoCh11G019660.1 | Cmo11g01966 | 392585 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01966 | 696 | Gene3D | Putative phosphatase; domain 2 | 387 | 430 | IPR023198 | - | |
Cmo11g01966 | 696 | SUPERFAMILY | HAD-like | 375 | 537 | IPR036412 | - | |
Cmo11g01966 | 696 | PANTHER | 14-3-3 PROTEIN | 1 | 221 | IPR000308 | - | |
Cmo11g01966 | 696 | Gene3D | - | 445 | 523 | IPR023214 | - | |
Cmo11g01966 | 696 | Pfam | Haloacid dehalogenase-like hydrolase | 426 | 506 | IPR041492 | - | |
Cmo11g01966 | 696 | Gene3D | - | 1 | 224 | IPR036815 | - | |
Cmo11g01966 | 696 | Pfam | 14-3-3 protein | 1 | 210 | IPR023410 | - | |
Cmo11g01966 | 696 | PRINTS | 14-3-3 protein zeta signature | 94 | 116 | IPR000308 | - | |
Cmo11g01966 | 696 | PRINTS | 14-3-3 protein zeta signature | 14 | 43 | IPR000308 | - | |
Cmo11g01966 | 696 | PRINTS | 14-3-3 protein zeta signature | 156 | 182 | IPR000308 | - | |
Cmo11g01966 | 696 | PRINTS | 14-3-3 protein zeta signature | 63 | 87 | IPR000308 | - | |
Cmo11g01966 | 696 | PRINTS | 14-3-3 protein zeta signature | 183 | 212 | IPR000308 | - | |
Cmo11g01966 | 696 | PRINTS | 14-3-3 protein zeta signature | 129 | 155 | IPR000308 | - | |
Cmo11g01966 | 696 | CDD | HAD_BPGM-like | 375 | 490 | - | - | |
Cmo11g01966 | 696 | PANTHER | 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 221 | - | - | |
Cmo11g01966 | 696 | Gene3D | - | 376 | 386 | IPR023214 | - | |
Cmo11g01966 | 696 | ProSitePatterns | 14-3-3 proteins signature 2. | 192 | 211 | IPR023409 | - | |
Cmo11g01966 | 696 | SMART | 1433_4 | 1 | 223 | IPR023410 | - | |
Cmo11g01966 | 696 | TIGRFAM | HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 | 458 | 506 | IPR006439 | - | |
Cmo11g01966 | 696 | ProSitePatterns | 14-3-3 proteins signature 1. | 20 | 30 | IPR023409 | - | |
Cmo11g01966 | 696 | SUPERFAMILY | 14-3-3 protein | 2 | 219 | IPR036815 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01966 | Cmo-Chr11:13528927 | Cmo12g00080 | Cmo-Chr12:434239 | 7.05E-125 | dispersed | |
Cmo11g00389 | Cmo-Chr11:1943530 | Cmo11g01966 | Cmo-Chr11:13528927 | 4.88E-13 | transposed | |
Cmo13g00697 | Cmo-Chr13:7120389 | Cmo11g01966 | Cmo-Chr11:13528927 | 7.77E-39 | transposed | |
Cmo11g01966 | Cmo-Chr11:13528927 | Cmo19g01060 | Cmo-Chr19:9198427 | 3.48E-157 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01966 | K06630 | K20884 | csv:101207959 | 467.618 |