Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01976 ATGGAAGTCGACAATGAGTACCGAAGAAAAGAGCAACTCGTTCTTGTGGCAATTGTTGTACTCGCTTCCCTGGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAAATCCGCAAAAGGGATGATCTTGAGAAGGGAGGTAGTTTTGACAATGTTAAAGAATTTTCCACCGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTATACTCAGCTACCTGTGGCTTTAGCAAGTCAAACGTGGTCGGGCACGGTAGCTTTGGATATGTATACCGAGGAGTTCTCAACGATGGGAGAAAGGTTGCGATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGACTTCATTCGCCATATTTGTTGGCCTTGCTCGGGTATTGCTCTAATAGCAATCATAAATTGCTCGTTTACGAGTTCATGGCTAATGGCGGTCTGCAAGAACATCTGTATCCTGTTAGCAGTTCAAATTCAGTCGGCGTTAAGTTGGACTGGGAAACGCGGTTGCGAGTTGCGCTTGAAGCTGCCAAGGGTTTGGAGTATTTACATGAACATGTAAGCCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTTCTGTTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATCGGTTCAGACAAAGTCGGGGGACACGTATCCACTCGAGTACTGGGGACACAAGGATATGTTGCGCCTGAGTATGCGCTAACAGGGCATTTGACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAATACTCCATGAAGGATGTTGTTCAAGTTGCAGCCATAGCCGCAATGTGTGTTCAACCAGAGGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGACAGCTTCAAAGATCGGTAGCGGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAAGGCTAGTTCGGAAGACTGA 1200 47.08 MEVDNEYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRDDLEKGGSFDNVKEFSTEKGLQVFTFKQLYSATCGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSNSNHKLLVYEFMANGGLQEHLYPVSSSNSVGVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTASKIGSGSSSSATKSPVAHDKASSED 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13587372 13591051 + CmoCh11G019760.1 Cmo11g01976 392595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01976 399 MobiDBLite consensus disorder prediction 375 399 - -
Cmo11g01976 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Cmo11g01976 399 Gene3D Phosphorylase Kinase; domain 1 51 163 - -
Cmo11g01976 399 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Cmo11g01976 399 PANTHER OS07G0227300 PROTEIN 3 396 - -
Cmo11g01976 399 MobiDBLite consensus disorder prediction 375 391 - -
Cmo11g01976 399 SUPERFAMILY Protein kinase-like (PK-like) 62 364 IPR011009 -
Cmo11g01976 399 CDD STKc_IRAK 94 367 - -
Cmo11g01976 399 PANTHER OS01G0750732 PROTEIN 3 396 - -
Cmo11g01976 399 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Cmo11g01976 399 Gene3D Transferase(Phosphotransferase) domain 1 164 383 - -
Cmo11g01976 399 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01152 Cmo-Chr10:9795572 Cmo11g01976 Cmo-Chr11:13587372 5.46E-143 dispersed
Cmo11g01154 Cmo-Chr11:6629912 Cmo11g01976 Cmo-Chr11:13587372 2.48E-121 dispersed
Cmo11g01976 Cmo-Chr11:13587372 Cmo14g00961 Cmo-Chr14:5121609 1.15E-105 dispersed
Cmo12g00305 Cmo-Chr12:1903675 Cmo11g01976 Cmo-Chr11:13587372 1.90E-90 dispersed
Cmo11g01976 Cmo-Chr11:13587372 Cmo19g01053 Cmo-Chr19:9149477 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74701 PF07714 PK_Tyr_Ser-Thr 4.70E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01976 - - csv:101204636 704.901