Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01977 | ATGGCGTCCATTTCCCATCTTTTCATTGTTCTTTCCCTTTTAGCCTTCTCAGCCAATGCTCAGCTCTCAGCCAACTTTTACGCGAAAAGCTGTCCCAATCTCAAACGAACCGTTCGTTCCATTATGACCAAAGCTGTTATCGCAGAAAAACGTATGGGAGCTTCAATTCTTCGCCTGTTCTTCCACGACTGCTTTGTTAATGGTTGTGATGGTAGTATATTGCTCGATGATACACTGACATTTACGGGCGAAAAGAATGCATTTCCTAATCGAGATACAGCTAGAGGGTTCGAAGTGATTGACAAAATTAAAACCGAAGTCGAAGCTACTTGCAAGAACACCGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTCGAGATGGGGTTGATTTGCTTGGAGGTCCTGATTGGAATGTACTACTCGGTCGGAAGGATTCGAGGACGGCGAGCGAGAGTGACGCTAACAACAACCTCCCGGGGCCAGGCTCCGACCTCCCAACGCTCATCTCTATGTTCAATGCCAAAGGCTTCAACGCCAATGAGATGACTGCCCTCTCCGGCGCCCACACTATTGGTATGGCTAGTTGTCGATTCTTCCGAAGACGCATTTACAACGATACCAACATCAATCCCGCCTTCGCCGAACAGCGGAGAGACAACTGTCCGTTCACAGGCGGCGACGCGAACTTGGCCCCTCTCGACTCGACCACCCAGAGGTTCGACAACCAATATTTCAAAGACTTGATTCAACAGCGCGGGCTGTTACATTCGGACCAAGAGCTCTTCAACGGCGGCTCACAAGACGCCTTGGTTCAGACTTACAGTAAAAGTCTCCTAACCTTTAGATGGGATTTCGTTAAAGCAATGATTAAGATGGGGAATCTCAGTCCTCCACCTGGATTACCCACTGAGATTAGACGAAATTGCAGGAAATTGAAACGGCGAGACCTCGGTGTTCTCTCAATCTCACATTGCCTTCTGATTTGTAGCGCTTATCGCATTTCATTGTCGGCTACCGGAGATTCTGCGGCTTTGGCTTTGGCTTTGGAAATGATCCTCTGA | 1062 | 48.21 | MASISHLFIVLSLLAFSANAQLSANFYAKSCPNLKRTVRSIMTKAVIAEKRMGASILRLFFHDCFVNGCDGSILLDDTLTFTGEKNAFPNRDTARGFEVIDKIKTEVEATCKNTVSCADILALAARDGVDLLGGPDWNVLLGRKDSRTASESDANNNLPGPGSDLPTLISMFNAKGFNANEMTALSGAHTIGMASCRFFRRRIYNDTNINPAFAEQRRDNCPFTGGDANLAPLDSTTQRFDNQYFKDLIQQRGLLHSDQELFNGGSQDALVQTYSKSLLTFRWDFVKAMIKMGNLSPPPGLPTEIRRNCRKLKRRDLGVLSISHCLLICSAYRISLSATGDSAALALALEMIL | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13592179 | 13594321 | + | CmoCh11G019770.1 | Cmo11g01977 | 392596 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01977 | 353 | Gene3D | Peroxidase, domain 2 | 159 | 292 | - | - | |
Cmo11g01977 | 353 | CDD | secretory_peroxidase | 21 | 311 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 31 | 50 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 231 | 246 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 55 | 75 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 180 | 192 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 247 | 264 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Plant peroxidase signature | 287 | 300 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | Pfam | Peroxidase | 38 | 277 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | ProSiteProfiles | Plant heme peroxidase family profile. | 21 | 313 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | SUPERFAMILY | Heme-dependent peroxidases | 21 | 311 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | ProSitePatterns | Peroxidases active site signature. | 53 | 64 | IPR019794 | GO:0004601 | |
Cmo11g01977 | 353 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
Cmo11g01977 | 353 | Gene3D | - | 25 | 310 | - | - | |
Cmo11g01977 | 353 | PANTHER | PEROXIDASE | 15 | 312 | - | - | |
Cmo11g01977 | 353 | PRINTS | Haem peroxidase superfamily signature | 181 | 196 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Haem peroxidase superfamily signature | 53 | 67 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PRINTS | Haem peroxidase superfamily signature | 233 | 248 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g01977 | 353 | PANTHER | PEROXIDASE 72-RELATED | 15 | 312 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01977 | Cmo-Chr11:13592179 | Cmo15g00169 | Cmo-Chr15:782241 | 7.35E-125 | dispersed | |
Cmo20g00343 | Cmo-Chr20:1681636 | Cmo11g01977 | Cmo-Chr11:13592179 | 6.88E-109 | dispersed | |
Cmo11g01977 | Cmo-Chr11:13592179 | Cmo19g01052 | Cmo-Chr19:9135234 | 1.32E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01977 | K00430 | - | csv:101208932 | 465.307 |