Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01986 ATGATTTCGAGATCGTACACGAATCTTTTAGATTTAGCGTCTGGAAATTTTCCAGCAATGGAAGTGAAACGGAAGCGGTTTCCACGGATCATGACTGTTCCAGGCGATGTAGGCGAGCTTGACGACGATCAGGCCTACAGCGTGACATCCGAAAATCCATCATCAATTTCCTCAGATCGGATGATAATTGTAGCAAACCAGCTTCCATTAAGAGCAAAACGAAGGGAAAATGACAATTCCTGGAGTTTCAATTGGAACGAAGATTCATTGCTTTTGCAGCTTAAAAGTGGTTTGCCAGAGGATATGGAGATTCTTTATGTTGGTTCTTTGAAAGTGGATATCCAACCAGACGAACAAGATGAGGTCTCCCAGGTTTTGTTGGAGAAATTTAAGTGTATTCCTACGTTTTTGCCTCCTCATGTTTTGGAAAAGTTCTATGATGGGTTCTGCAAGAGGCATTTGTGGCCTCTTTTTCATTATATGTTGCCATATTCTGCTGATCAGAAGGGTCGATTCGATCGCTCGATGTGGGAAGCTTATGTATCAGCAAATAAGCTGTTCTTCCAGAAAGTGGTTGAGGTGATCAACCCAGATGATGACTATATTTGGATCCATGATTACCATTTGATGGTAATGCCCACGTTCTTGAGGAGGCGTTTTAACAGAGTTAAGATGGGATTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGTACCCTTCCTGTTAGAGAAGAGATTCTCAAGGCATTACTTAACTCTGATATCATTGGATTTCACACTTTCGATTACGCTCGTCATTTCCTTTCGTGTTGCAGCCGAATGTTGGGTTTGGAGTATCAGTCGAAGAGGGGCTATCTTGGATTGGAATACTACGGGAGGACGATCGGGATAAAGATAATGCCTGTTGGTATTCATATGACTCGGATTGAGTCGGTGATGAGACTGGCAGACAAGGATGTTAAGACTAGGGAACTCACGCAGCAATTTGCGGGGAAGACGGTGTTGCTAGGTGTCGATGATATGGACATTTTCAAAGGAATCAACCTGAAATTGTTAGCTATGGAACAGGTGCTTGAGCAACATCCAAAGTGGCAGGGGAAGGCCGTACTGGTCCAAATTGTAAATCCTGCCAGAGGCAAGGGAAGGGATTTGGAAGAAATAGAAGATGAAATAAAAGAAAGTTGCAGAAGGATTAACAAGGAATATGGGGATTCTGGCTATGAGCCGATAGTACTTCTGGATAGGCATGTGCCAATTACGGAAAGGGTTGCTTATTATAGCATTGCGGAGTGCGTAGTTGTCACTGCTGTTCGAGATGGGATGAACTTAACTCCGTATGAGTACGTTGTCTGCAGACAGGGAATATCCTCCCAAGAAAGTTCGAACTTCCACGGACCGAAAAAGAGCATGCTTGTCATATCCGAGTTTATTGGATGTTCTCCATCACTAAGTGGAGCATTTCGTATCAACCCATGGAATGTCGAACGGACAGCAGAGGCTTTGAATGAAGCAATCTCAATGGCGGATACGGAGAAGCAGTTGCGACATGAGAAGCATTACCGTTATGTTGCTACTCACGATGTCGCTTATTGGTCTCGTAGTTTCTTGCAAGATATGGAGAGAACTTGCTCAGATCATTTCAGGAGACGATGTTGGGGAATTGGTTTTAGTTTCGGTTTCAGGGTTGTAGCTCTTGATCCCAATTTCAGAAAACTTTCAGTAGATTCCATTTTATCAGCTTACAGTAAGGCCGAAAGTCGGGCCATTCTTTTGGACTACGATGGCACCGTGATGCCTCAAAACTCCATAAATAAGTCGCCGAGTCAGCAGGTTATCTCTATCCTTAACACGCTTTGTGCAGATTCAAAAAATGTAGTCTTCATTGTGAGTGGACGTGGGAGGGACAGCTTAAGCAAGTGGTTTCGCCCTTGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATCTTTTGAGGCAGTCACAGGACGTGGAGTGGAAGATCTGCGGCCAAAGTTCTGATTTCGGGTGGATGCAGATTGCTGAACCTGTTATGAACTTATATACGGAGGCTACAGATGGTTCATCTATTGAAAGAAAGGAAAGTGCCTTGGTCTGGCAGTATAGAGATGCAGATCCTGGTTTTGGATCTTCCCAGGCTAAGGAGATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCCGTTGCAGTCAAAAGCGGTCAATTCATCGTCGAAGGGGTTACCAAAGGCTTAGTAGCTGAAAAGATTTTTTCAACAATGGCGGAGGAAGGAAAACTTGCTGACTTTGTGTTGTGTATTGGCGACGACAGATCCGATGAGGACATGTTCGAAATAATTGGTAATGCATTGTCCAGTAATATTCTTTCTCCTTCGACGTCGGTTTTTGCCTGCACTGTTGGACAGAAGCCGAGCAAAGCGAAATATTATTTAGACGACACAGCTGAAGTGATAAGCATGCTAGAATACCTCGCCGAAGCTTCTAGCCCGTTGCCATCCTCCGACAATGACGATGGTGAAAACGCTTCCTGA 2556 44.01 MISRSYTNLLDLASGNFPAMEVKRKRFPRIMTVPGDVGELDDDQAYSVTSENPSSISSDRMIIVANQLPLRAKRRENDNSWSFNWNEDSLLLQLKSGLPEDMEILYVGSLKVDIQPDEQDEVSQVLLEKFKCIPTFLPPHVLEKFYDGFCKRHLWPLFHYMLPYSADQKGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVMPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMTRIESVMRLADKDVKTRELTQQFAGKTVLLGVDDMDIFKGINLKLLAMEQVLEQHPKWQGKAVLVQIVNPARGKGRDLEEIEDEIKESCRRINKEYGDSGYEPIVLLDRHVPITERVAYYSIAECVVVTAVRDGMNLTPYEYVVCRQGISSQESSNFHGPKKSMLVISEFIGCSPSLSGAFRINPWNVERTAEALNEAISMADTEKQLRHEKHYRYVATHDVAYWSRSFLQDMERTCSDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDSILSAYSKAESRAILLDYDGTVMPQNSINKSPSQQVISILNTLCADSKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYLLRQSQDVEWKICGQSSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEGVTKGLVAEKIFSTMAEEGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPSTSVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSDNDDGENAS 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13631629 13635214 + CmoCh11G019860.1 Cmo11g01986 392605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01986 851 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 844 IPR001830 GO:0003824|GO:0005992
Cmo11g01986 851 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 545 - -
Cmo11g01986 851 Pfam Glycosyltransferase family 20 60 542 IPR001830 GO:0003824|GO:0005992
Cmo11g01986 851 Pfam Trehalose-phosphatase 592 822 IPR003337 GO:0003824|GO:0005992
Cmo11g01986 851 TIGRFAM T6PP: trehalose-phosphatase 587 833 IPR003337 GO:0003824|GO:0005992
Cmo11g01986 851 CDD HAD_TPP 590 825 - -
Cmo11g01986 851 CDD GT20_TPS 60 542 IPR001830 GO:0003824|GO:0005992
Cmo11g01986 851 SUPERFAMILY HAD-like 589 833 IPR036412 -
Cmo11g01986 851 Gene3D - 588 690 IPR023214 -
Cmo11g01986 851 Gene3D - 718 844 IPR023214 -
Cmo11g01986 851 Gene3D Glycogen Phosphorylase B; 53 313 - -
Cmo11g01986 851 Gene3D Glycogen Phosphorylase B; 314 526 - -
Cmo11g01986 851 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 844 - -
Cmo11g01986 851 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 591 791 IPR006379 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01986 Cmo19g01042 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01986 Cmo-Chr11:13631629 Cmo16g01224 Cmo-Chr16:8764732 0 dispersed
Cmo11g01986 Cmo-Chr11:13631629 Cmo19g01042 Cmo-Chr19:9093586 0 wgd
Cmo11g01986 Cmo-Chr11:13631629 Cmo03g01337 Cmo-Chr3:9942083 0 wgd
Cmo11g01986 Cmo-Chr11:13631629 Cmo07g00166 Cmo-Chr7:878233 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01986 K16055 - csv:101209914 1630.92