Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01986 | ATGATTTCGAGATCGTACACGAATCTTTTAGATTTAGCGTCTGGAAATTTTCCAGCAATGGAAGTGAAACGGAAGCGGTTTCCACGGATCATGACTGTTCCAGGCGATGTAGGCGAGCTTGACGACGATCAGGCCTACAGCGTGACATCCGAAAATCCATCATCAATTTCCTCAGATCGGATGATAATTGTAGCAAACCAGCTTCCATTAAGAGCAAAACGAAGGGAAAATGACAATTCCTGGAGTTTCAATTGGAACGAAGATTCATTGCTTTTGCAGCTTAAAAGTGGTTTGCCAGAGGATATGGAGATTCTTTATGTTGGTTCTTTGAAAGTGGATATCCAACCAGACGAACAAGATGAGGTCTCCCAGGTTTTGTTGGAGAAATTTAAGTGTATTCCTACGTTTTTGCCTCCTCATGTTTTGGAAAAGTTCTATGATGGGTTCTGCAAGAGGCATTTGTGGCCTCTTTTTCATTATATGTTGCCATATTCTGCTGATCAGAAGGGTCGATTCGATCGCTCGATGTGGGAAGCTTATGTATCAGCAAATAAGCTGTTCTTCCAGAAAGTGGTTGAGGTGATCAACCCAGATGATGACTATATTTGGATCCATGATTACCATTTGATGGTAATGCCCACGTTCTTGAGGAGGCGTTTTAACAGAGTTAAGATGGGATTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGTACCCTTCCTGTTAGAGAAGAGATTCTCAAGGCATTACTTAACTCTGATATCATTGGATTTCACACTTTCGATTACGCTCGTCATTTCCTTTCGTGTTGCAGCCGAATGTTGGGTTTGGAGTATCAGTCGAAGAGGGGCTATCTTGGATTGGAATACTACGGGAGGACGATCGGGATAAAGATAATGCCTGTTGGTATTCATATGACTCGGATTGAGTCGGTGATGAGACTGGCAGACAAGGATGTTAAGACTAGGGAACTCACGCAGCAATTTGCGGGGAAGACGGTGTTGCTAGGTGTCGATGATATGGACATTTTCAAAGGAATCAACCTGAAATTGTTAGCTATGGAACAGGTGCTTGAGCAACATCCAAAGTGGCAGGGGAAGGCCGTACTGGTCCAAATTGTAAATCCTGCCAGAGGCAAGGGAAGGGATTTGGAAGAAATAGAAGATGAAATAAAAGAAAGTTGCAGAAGGATTAACAAGGAATATGGGGATTCTGGCTATGAGCCGATAGTACTTCTGGATAGGCATGTGCCAATTACGGAAAGGGTTGCTTATTATAGCATTGCGGAGTGCGTAGTTGTCACTGCTGTTCGAGATGGGATGAACTTAACTCCGTATGAGTACGTTGTCTGCAGACAGGGAATATCCTCCCAAGAAAGTTCGAACTTCCACGGACCGAAAAAGAGCATGCTTGTCATATCCGAGTTTATTGGATGTTCTCCATCACTAAGTGGAGCATTTCGTATCAACCCATGGAATGTCGAACGGACAGCAGAGGCTTTGAATGAAGCAATCTCAATGGCGGATACGGAGAAGCAGTTGCGACATGAGAAGCATTACCGTTATGTTGCTACTCACGATGTCGCTTATTGGTCTCGTAGTTTCTTGCAAGATATGGAGAGAACTTGCTCAGATCATTTCAGGAGACGATGTTGGGGAATTGGTTTTAGTTTCGGTTTCAGGGTTGTAGCTCTTGATCCCAATTTCAGAAAACTTTCAGTAGATTCCATTTTATCAGCTTACAGTAAGGCCGAAAGTCGGGCCATTCTTTTGGACTACGATGGCACCGTGATGCCTCAAAACTCCATAAATAAGTCGCCGAGTCAGCAGGTTATCTCTATCCTTAACACGCTTTGTGCAGATTCAAAAAATGTAGTCTTCATTGTGAGTGGACGTGGGAGGGACAGCTTAAGCAAGTGGTTTCGCCCTTGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATCTTTTGAGGCAGTCACAGGACGTGGAGTGGAAGATCTGCGGCCAAAGTTCTGATTTCGGGTGGATGCAGATTGCTGAACCTGTTATGAACTTATATACGGAGGCTACAGATGGTTCATCTATTGAAAGAAAGGAAAGTGCCTTGGTCTGGCAGTATAGAGATGCAGATCCTGGTTTTGGATCTTCCCAGGCTAAGGAGATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCCGTTGCAGTCAAAAGCGGTCAATTCATCGTCGAAGGGGTTACCAAAGGCTTAGTAGCTGAAAAGATTTTTTCAACAATGGCGGAGGAAGGAAAACTTGCTGACTTTGTGTTGTGTATTGGCGACGACAGATCCGATGAGGACATGTTCGAAATAATTGGTAATGCATTGTCCAGTAATATTCTTTCTCCTTCGACGTCGGTTTTTGCCTGCACTGTTGGACAGAAGCCGAGCAAAGCGAAATATTATTTAGACGACACAGCTGAAGTGATAAGCATGCTAGAATACCTCGCCGAAGCTTCTAGCCCGTTGCCATCCTCCGACAATGACGATGGTGAAAACGCTTCCTGA | 2556 | 44.01 | MISRSYTNLLDLASGNFPAMEVKRKRFPRIMTVPGDVGELDDDQAYSVTSENPSSISSDRMIIVANQLPLRAKRRENDNSWSFNWNEDSLLLQLKSGLPEDMEILYVGSLKVDIQPDEQDEVSQVLLEKFKCIPTFLPPHVLEKFYDGFCKRHLWPLFHYMLPYSADQKGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVMPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMTRIESVMRLADKDVKTRELTQQFAGKTVLLGVDDMDIFKGINLKLLAMEQVLEQHPKWQGKAVLVQIVNPARGKGRDLEEIEDEIKESCRRINKEYGDSGYEPIVLLDRHVPITERVAYYSIAECVVVTAVRDGMNLTPYEYVVCRQGISSQESSNFHGPKKSMLVISEFIGCSPSLSGAFRINPWNVERTAEALNEAISMADTEKQLRHEKHYRYVATHDVAYWSRSFLQDMERTCSDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDSILSAYSKAESRAILLDYDGTVMPQNSINKSPSQQVISILNTLCADSKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYLLRQSQDVEWKICGQSSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEGVTKGLVAEKIFSTMAEEGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPSTSVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSDNDDGENAS | 851 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13631629 | 13635214 | + | CmoCh11G019860.1 | Cmo11g01986 | 392605 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01986 | 851 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 1 | 844 | IPR001830 | GO:0003824|GO:0005992 | |
Cmo11g01986 | 851 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 545 | - | - | |
Cmo11g01986 | 851 | Pfam | Glycosyltransferase family 20 | 60 | 542 | IPR001830 | GO:0003824|GO:0005992 | |
Cmo11g01986 | 851 | Pfam | Trehalose-phosphatase | 592 | 822 | IPR003337 | GO:0003824|GO:0005992 | |
Cmo11g01986 | 851 | TIGRFAM | T6PP: trehalose-phosphatase | 587 | 833 | IPR003337 | GO:0003824|GO:0005992 | |
Cmo11g01986 | 851 | CDD | HAD_TPP | 590 | 825 | - | - | |
Cmo11g01986 | 851 | CDD | GT20_TPS | 60 | 542 | IPR001830 | GO:0003824|GO:0005992 | |
Cmo11g01986 | 851 | SUPERFAMILY | HAD-like | 589 | 833 | IPR036412 | - | |
Cmo11g01986 | 851 | Gene3D | - | 588 | 690 | IPR023214 | - | |
Cmo11g01986 | 851 | Gene3D | - | 718 | 844 | IPR023214 | - | |
Cmo11g01986 | 851 | Gene3D | Glycogen Phosphorylase B; | 53 | 313 | - | - | |
Cmo11g01986 | 851 | Gene3D | Glycogen Phosphorylase B; | 314 | 526 | - | - | |
Cmo11g01986 | 851 | PANTHER | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED | 1 | 844 | - | - | |
Cmo11g01986 | 851 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 591 | 791 | IPR006379 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo11g01986 | Cmo19g01042 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01986 | Cmo-Chr11:13631629 | Cmo16g01224 | Cmo-Chr16:8764732 | 0 | dispersed | |
Cmo11g01986 | Cmo-Chr11:13631629 | Cmo19g01042 | Cmo-Chr19:9093586 | 0 | wgd | |
Cmo11g01986 | Cmo-Chr11:13631629 | Cmo03g01337 | Cmo-Chr3:9942083 | 0 | wgd | |
Cmo11g01986 | Cmo-Chr11:13631629 | Cmo07g00166 | Cmo-Chr7:878233 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01986 | K16055 | - | csv:101209914 | 1630.92 |