Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01993 ATGAAGCGTTTCGTTTACATCAATGACGATGAACCATCAAATGATCTTTACTGTGATAATCGCATTTCGAACCGGAAATACACTTTATTGAACTTTCTCCCAAAAAATTTATGGGAACAGTTCAGACGCTTCATGAACCAATACTTTTTGTTAATTGCGTGCCTACAGTTATGGCCACTTATAACTCCAGTAAACCCCGCCAGTACATGGGGTCCTCTTATCTTCATTTTTGCTGTGTCTGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTATCAGACAAAAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAGGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTGATTTAGTATGGCTCAGGGAGAATGATGAAGTGCCTTCGGATCTTGTTTTGATTGGTACCTCCGATTCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACGAGGGTCATACCTTCAGCTTGTATGGGAATAGATTTTGATCTATTAAACAAGATCAAGGGAGTCATAGAGTGCCCTAGACCAGATAAGGATATAAGAAGATTTGATGCAAACCTTCGATTATTTCCTCCTTTCATTGACAATGATGTGTGCCCATTGACAATAAAAAACACAATTCTTCAGTCATGTTACTTACGGAACACAGAGTGGGTCTGTGGAGTAGCCATCTACACGGGCAATGAAACCAAGCTTGGAATGAGCAGGGGTGTCCCAGAACCAAAACTTACAGCGATGGATGCAATGATTGACAAGTTAACTGGGGCTATATTTGTTTTTCAAATTGTGGTGGTTGTTGTTCTAGGTTTAGCTGGTAATGTGTGGAAGGATTCTGAAGCCAGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGTCCATGGTATGAGCTACTGATCATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCCATTTCAATTAAGGTGTCACTGGATCTTGTAAAGAGCTTATATGCAAAATTCATTGATTGGGACTATGAAATGATTGACCGTGTGACTGGTATTCCTTCCCATGCTACGAATACGGCAATAAGTGAGGACCTGGGACAAGTTGAATACATTTTGACGGATAAAACTGGTACCCTCACTGAAAACAAGATGATCTTCAGGAGATGTTGTATCAGTGGCATATTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAGTTGCTCAATGCTATTGCAAGCAGCTCTCCTGACGTTACAAGATTTCTAACAATTATGGCAATTTGTAATACAGTGGTGCCTACAAAAAGCAAAAGTGGAAATATCCTGTACAAGGCACAGTCACAGGATGAGGATGCTCTCGTGAATGCTGCTGCTTACTTGCATATGGTATTTGTCAATAAGAATGCTAATAATCTTGACATTCAGTTTAATGGAATGCTAAATAGATATGAACTCCTAGATACTCTGGAGTTCACATCTGAACGAAAAAGGATGTCTGTGGTAGTTAAAGATTGTCAGAATGGGAAGATTATCCTCCTATCAAAAGGAGCTGATGAAGCTATACTTCCTCATGCTTATGCTGGCCAACAAACAAGAACATTTATTGAAGCTGTTGACCAGTACGCACAACTGGGGCTCCGTACATTATGTCTGGCTTGGCGGGAACTAGAAGAAGATGAGTATCGAGAATGGGCTTTTATGTTTAAGGAGGCTAATAGCACATTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGCCAAAGATTAGAGCGCAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATCGAAACATTAAGAAGAGCAGGAATAAATTTCTGGATGCTGACGGGAGACAAGCAGAACACTGCCATTCAGATAGCTCTCCTATGCAACTTTATTTCACCAGAGCCCAAAGGACAATTATTGTTAATTGATGGAAAAACGGAGGATGAAGTTTGTAGAAGTTTGGATAGAGTTGTTCTGACTATGAAGACCACAACCTCAGAACCCAAGGATGTTGCTTTCGTTGTTGATGGCTGGGCTCTTGAAATTGCTCTCAAGAATTATCGCAGGGCTTTCACCGAATTAGCAATCCTATCAAGAACTGCAATATGTTGTCGTGTTACTCCATCACAGAAGGCTCAGCTAGTGGAACTCTTAAAATCGTGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGACATTGGAGTGGGCATTAGTGGAAGAGAAGGACTGCAAGCAGCTAGGGCAGCTGATTACAGTATTGGAAAGTTCAGGTTTCTGAAAAGATTGATTTTAGTTCATGGACGATACTCATACAACCGTACAGCATTTTTGTCACAATATTCATTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATTTCAGGTGTCTCTGGGACCAGTCTATTTAATTCTGTAAGCTTGATGGCTTACAATGTTTTCTACACCAGTATTCCTGTATTAGTTAGTGTCCTTGACAAAGACCTCAGCGAAGAAACAGTGATGCAACATCCTCAAATTTTATTTTACTGCCAAGCTGGGAGGCTTTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCCGTTGTGGTGTTTGTAATTAGCATCCATGCCTATGCTAACGAAAAGAGTGAAATGGTGGAGGTTTCAATGGTGGCTCTATCTGGGTGCATTTGGTTACAGGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATGTTGCAACATCTGGCTATATGGGGGAATTTAGCTGCTTTCTACGTGATCAATTGGATCTTCAGTGCCATTCCTTCATCTGGAATGTATACAATAATGTTTCGATTATGTGGACAACCATCTTACTGGATAACCATATTTCTAATAGTAGGCGTGGGAATGGGCCCACTTCTAGCTATCAAGTACTTCAGGTACACATATAGACCAAGCAAAATCAACACTCTTCAGCAGGCTGAACGATTGGGTGGGCCGATCATGTCGCTCAAAAACATAGAGCACCAGCCTCGGCCCATTGAGAAAGAAGTGTCTCCACTGTCAATAACTCAGCAGCCCAAGAGCAGAAATACAGTCTACGAACCTCTTTTATCAGACTCTCCTACTGCCACTAGAAGATCTCTTGCGTCAGGTCCCTCCTTCGATTTCTTTCAGACACCACCCAGTTACTCAAGAAATAAGGATAACTGA 3306 40.8 MKRFVYINDDEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFRRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGTRKIIQAQDIHVGDLVWLRENDEVPSDLVLIGTSDSQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPRPDKDIRRFDANLRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWVCGVAIYTGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQIVVVVVLGLAGNVWKDSEARKLWYVQHPEEGPWYELLIIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDRVTGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDKKLLNAIASSSPDVTRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKNANNLDIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIILLSKGADEAILPHAYAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLDRVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPIMSLKNIEHQPRPIEKEVSPLSITQQPKSRNTVYEPLLSDSPTATRRSLASGPSFDFFQTPPSYSRNKDN 1101
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13651239 13662526 + CmoCh11G019930.1 Cmo11g01993 392612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01993 1101 MobiDBLite consensus disorder prediction 1050 1101 - -
Cmo11g01993 1101 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Cmo11g01993 1101 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 385 1098 - -
Cmo11g01993 1101 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Cmo11g01993 1101 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 1016 IPR023298 -
Cmo11g01993 1101 SUPERFAMILY HAD-like 374 805 IPR036412 -
Cmo11g01993 1101 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 422 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cmo11g01993 1101 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Cmo11g01993 1101 Gene3D - 602 790 IPR023214 -
Cmo11g01993 1101 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Cmo11g01993 1101 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Cmo11g01993 1101 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Cmo11g01993 1101 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Cmo11g01993 1101 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 834 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo11g01993 1101 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Cmo11g01993 1101 Pfam E1-E2 ATPase 99 293 - -
Cmo11g01993 1101 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Cmo11g01993 1101 MobiDBLite consensus disorder prediction 1046 1101 - -
Cmo11g01993 1101 Pfam Cation transport ATPase (P-type) 436 533 - -
Cmo11g01993 1101 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Cmo11g01993 1101 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 385 1098 - -
Cmo11g01993 1101 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 573 IPR023299 GO:0000166
Cmo11g01993 1101 Gene3D - 445 582 IPR023299 GO:0000166
Cmo11g01993 1101 SFLD C1.7: P-type atpase like 362 801 - -
Cmo11g01993 1101 SFLD p-type atpase 362 801 IPR044492 -
Cmo11g01993 1101 Gene3D - 75 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01993 Cmo-Chr11:13651239 Cmo07g01262 Cmo-Chr7:6898040 0 dispersed
Cmo11g01993 Cmo-Chr11:13651239 Cmo19g01037 Cmo-Chr19:9055080 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01993 K01530 - csv:101210900 2103.18