Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g02021 | ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGAGTTTGTGGCCACTATCACAAATACGAAGAAGGGGAAGTCTGTGGGATATGTGGTCATCGTGTTCCCGCTACATCCGAGAAAACTTCCTTGCAAGTTAGTGCGTTTCCTTCAGAGATCTTGCCAGAGTTTCTCTATTTGGGAAGTTATGACAACGCTTCACGGTCTGAACTTTTGAAGACTCAAGGAATTTCTCGCGTTCTTAACACTGTGCCTGCTTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATACGACAAGACGTTACCATTTGATGACGCTGTTGAATTTCTAGATTACTATCTGCTGAATGAATGGCTTTCGGTTAAGACCATGACTAGCTTTCTGTCATTCACTGAGAGAAATCAATGTGAACGAGATAAGGCTCGTGTTTTGGTGCACTGCATGTCGGGAAAAAACAGGTTCTCTCCCCTATTCATTGATAAAACTGGAACTCTGAAACTATTTATGTACCCGATTAAACTTATTGATCATAGGTCTCCAGCTATTGTAATCGCGTTCTTGATGAAATGCAAAGGATGGAGACTTGCTCAGAGTTACCAGTGGGTGAAAGAGCGGAGGCCATCTGTTGACTTAACTGAGCCTATCTATCAGCAGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATCAACCGAAAACGCCCTCCCAACCTTACCAATCTTCCCTCCTGTTGGTCTGCCTTCTTTTAGCTTCGGCTTCCCAAAGACCTGCGACCCAGTTCCCACAACTCCATTCAACACCATTGGTGCAACATCTATCTTCTCCGCCCCCAACATAGACTTACCTTCTCACGAGTTCACGTTTGGCGCTGGCCAGACTCAAACTAGTTTCTCCGCAAGCCCCTTCGGCGCAAATCCAAGAAACTCAACCAGCAGCAACATCCAAATGGACAGTGCTTAA | 963 | 45.28 | MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPACQNLYKNSFTYHCLQYDKTLPFDDAVEFLDYYLLNEWLSVKTMTSFLSFTERNQCERDKARVLVHCMSGKNRFSPLFIDKTGTLKLFMYPIKLIDHRSPAIVIAFLMKCKGWRLAQSYQWVKERRPSVDLTEPIYQQLQEYEQKVFGSTENALPTLPIFPPVGLPSFSFGFPKTCDPVPTTPFNTIGATSIFSAPNIDLPSHEFTFGAGQTQTSFSASPFGANPRNSTSSNIQMDSA | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13784088 | 13786538 | - | CmoCh11G020210.1 | Cmo11g02021 | 392640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g02021 | 320 | SMART | dsp_5 | 46 | 227 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo11g02021 | 320 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 136 | 161 | - | - | |
Cmo11g02021 | 320 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 179 | 230 | IPR029021 | - | |
Cmo11g02021 | 320 | MobiDBLite | consensus disorder prediction | 298 | 320 | - | - | |
Cmo11g02021 | 320 | Gene3D | Protein tyrosine phosphatase superfamily | 30 | 232 | IPR029021 | - | |
Cmo11g02021 | 320 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 177 | 319 | IPR044212 | GO:0009734|GO:0009738|GO:0033549|GO:0043407 | |
Cmo11g02021 | 320 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 47 | 155 | IPR029021 | - | |
Cmo11g02021 | 320 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 1 | 113 | IPR044212 | GO:0009734|GO:0009738|GO:0033549|GO:0043407 | |
Cmo11g02021 | 320 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 136 | 161 | IPR044212 | GO:0009734|GO:0009738|GO:0033549|GO:0043407 | |
Cmo11g02021 | 320 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 1 | 113 | - | - | |
Cmo11g02021 | 320 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 177 | 319 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g02021 | Cmo-Chr11:13784088 | Cmo08g01140 | Cmo-Chr8:7275567 | 1.49E-07 | dispersed | |
Cmo11g02021 | Cmo-Chr11:13784088 | Cmo19g01082 | Cmo-Chr19:9311595 | 3.13E-167 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g02021 | K04459 | - | csv:101211000 | 497.278 |