Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g02069 ATGTTAAACCTTTTCTCTGTTTTCCTTTTCCTCACCTTCATCCTCCCTGCTGATGTAGTCCACGCCGGGCGTGGGCGGGAGTCTTGTACCTGTCATTCCGCCGCCGACCACAACGCAGAGGAGGCAATCAAATACAAGGTTGGCTCGATTGCTTCGGTGCTCGTGGCCGGCGCGGCTGGTGTGAGCCTTCCTTTGGTGGGCAAGAAGATTCCGTCTCTGAGGCCTGAAAATGACATCTTTTTCATGATCAAGGCTTTTGCTGCGGGTGTCATTTTAGGCACTGGGTTCATCCACATACTGCCTGATGCCTTCCAGGACTTGACCTCCCCCTGCATCGGACAGAACCCTTGGGGCGATTTCCCATTTGCGGGGTTCATTGCCATGGCCTCCTCCATCGGCACCTTGATGGTGGACACATTCGCAACCAGCTTCTACCAGAGACGCCACTTCAGTAAAATCAAGCATGTAATTGCAGTTGCAGACCAGGAAAGAGGCGAGGAGCATGCCGGTCACGTGCATGTCCACACCCACGCCACACATGGTCACGCTCACGGCTCTGCAGCACCCACCGGAGAAACATCGAGTCTGACTGAGTTAATCCGGTACCGGATTGTATCTCAGGTGTTGGAATTGGGGATTGTGGTTCATTCAGTAATAATTGGGATTTCTCTTGGTACCTCCCACAGCCCTGCCACCATTAAGCCACTGCTGGTGGCTCTGTCTTTCCACCAGTTTTTTGAGGGAATGGGACTCGGTGGCTGCATTTCCCAGGCACAGTTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTTTCACTGACAGCGCCTGTGGGCATTGCAGTGGGAATCGCAATTTCGCGAGTTTACAGAGACAGCAGCCGGACGACTCTGATCGTGGAAGGGAGCATGAACTCTGCATCGGCCGGGATATTGATATACATGGCGCTGGTGGATCTTCTTGCAACGGATTTCATGAACCCAAGGATGCAGAATAATTTGGGGCTTCAATTAGGATCTAATATCTCTTTGCTTCTGGGGGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTGA 1077 52.55 MLNLFSVFLFLTFILPADVVHAGRGRESCTCHSAADHNAEEAIKYKVGSIASVLVAGAAGVSLPLVGKKIPSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIGQNPWGDFPFAGFIAMASSIGTLMVDTFATSFYQRRHFSKIKHVIAVADQERGEEHAGHVHVHTHATHGHAHGSAAPTGETSSLTELIRYRIVSQVLELGIVVHSVIIGISLGTSHSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIAVGIAISRVYRDSSRTTLIVEGSMNSASAGILIYMALVDLLATDFMNPRMQNNLGLQLGSNISLLLGAACMSVLAKWA 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13998282 14000128 + CmoCh11G020690.1 Cmo11g02069 392688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g02069 358 PANTHER METAL TRANSPORT PROTEIN 26 358 - -
Cmo11g02069 358 TIGRFAM zip: ZIP zinc/iron transport family 30 358 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cmo11g02069 358 PANTHER ZINC/IRON TRANSPORTER 26 358 - -
Cmo11g02069 358 Pfam ZIP Zinc transporter 45 355 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00697 Cmo-Chr9:3443546 Cmo11g02069 Cmo-Chr11:13998282 9.47E-122 dispersed
Cmo09g00698 Cmo-Chr9:3446176 Cmo11g02069 Cmo-Chr11:13998282 3.12E-121 dispersed
Cmo11g02069 Cmo-Chr11:13998282 Cmo18g00524 Cmo-Chr18:3822705 2.57E-113 dispersed
Cmo11g02069 Cmo-Chr11:13998282 Cmo19g01145 Cmo-Chr19:9642448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g02069 K14709 - csv:101216720 509.99