Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00001 | ATGGCGGCTCGGAGGATATCCTCGCTCTTATCTCGTTCCCTTGCTTCTTCACCAGCTCTCCTTTCCAAAGGGAGGAGGCCTTCCGGTAGCAGAACAACTGGCAAATATAGCACCTCCGCTGCTGTTGAGGATCCAATTACTCCATCTGTGAAAGTAAATTATACCCAGCTGCTAATCAACGGACAGTTTGTGGATTCAGTTTCAGGAAAAACTTTTCCTACACTGGACCCAAGGACTGGAGAAGTCATTGCGAATGTTGCTGAAGGTGACGCCAGAGATATTGATCTTGCAGTTTCTGCTGCACGCAAGGCATTCGATGATGGGCCTTGGCCTAGAATGACTGCTTATGAAAGGTCAAAGATACTTTTGCGATTTGCCGATTTGGTTGAAAAGCATGCCGATGAAGTTGCAGCACTCGAAACTTGGGACAATGGGAAAACATACGAACAGTCAGCCAAATTGGAAGTCCCAATGTTTGTACGCCTCTTCCGATATTATGCGGGGTGGGCCGATAAGATTCACGGACTCACAGTTCCAGCTGATGGCTCGTATCATGTGCAGACCTTGCACGAACCAATTGGTGTTGCGGGTCAGATTATTCCATGGAACTTTCCTCTGCTCATGTTTGCTTGGAAGGTTGGTCCAGCATTAGCATGTGGGAATACTATTGTTCTGAAGACAGCCGAGCAGACACCTTTGTCTGCTATCTATGTGGCTAAGCTATTGCATGAGGCTGGACTTCCTGCGGGCGTTCTCAATATTGTTTCCGGTTATGGACCCACTGCTGGTGCTGCTCTTGCCAGTCATATGGAAGTTGACAAGCTTGCTTTTACTGGATCAACCGAAACAGGGCAGATTGTACTTGAACTAGCTGCAAAAAGCAATCTGAAGCCAGTAACTTTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTGGATAAGGCTGTCGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGCTGCTGTGCTGGTTCCCGTACTTTTGTTCATGAAAAAGTGTATGATGAGTTTCTAGAAAAATCAAGGAAACGAGCTGCAAACCGCGTTGTTGGTGATCCATTCCTAGGTGGAATTGAGCAAGGTCCTCAGGTGGACGGCGAACAATTCAAAAAGATTTTGAGATATATAAAATCTGGGATTGAAGGTGGAGCCACTCTCGAAGCTGGAGGAGAGAGGTTTGGTTCCAAGGGTTACTATGTCCAGCCAACAGTTTTCTCGAACGTCAAGGATGACATGACAATTGCACAGGAGGAGATTTTTGGTCCTGTACAGACAATCTTGAAATACAAAGAGGTTGAGGAGGTGATAAGGAGGGCAAATGCTAGTCGCTATGGGCTGGCGGCTGGGGTGTTTACTCAAAATATCGACACAGCCAACAGGCTGACCCGTGCGCTGAGAGTTGGGTCTGTGTGGATCAATTGCTTCGATATATTTGATGCTGCGATTCCTTTTGGTGGGTACAAGATGAGCGGACATGGACGAGAAAAGGGTATTTACAGCCTCAGCAATTATCTGCAAGTGAAGGCTGTTGTCACTCCTTTGAACAACCCTGCTTGGCTCTAA | 1608 | 46.95 | MAARRISSLLSRSLASSPALLSKGRRPSGSRTTGKYSTSAAVEDPITPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGEVIANVAEGDARDIDLAVSAARKAFDDGPWPRMTAYERSKILLRFADLVEKHADEVAALETWDNGKTYEQSAKLEVPMFVRLFRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAIYVAKLLHEAGLPAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGQIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVYDEFLEKSRKRAANRVVGDPFLGGIEQGPQVDGEQFKKILRYIKSGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMTIAQEEIFGPVQTILKYKEVEEVIRRANASRYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAIPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLNNPAWL | 535 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 477 | 4056 | - | CmoCh12G000010.1 | Cmo12g00001 | 392689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00001 | 535 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 23 | 535 | - | - | |
Cmo12g00001 | 535 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 59 | 523 | IPR016162 | GO:0016491 | |
Cmo12g00001 | 535 | CDD | ALDH_F2BC | 52 | 527 | - | - | |
Cmo12g00001 | 535 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 305 | 494 | IPR016163 | GO:0016620 | |
Cmo12g00001 | 535 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 301 | 308 | IPR029510 | GO:0016491 | |
Cmo12g00001 | 535 | PANTHER | ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL | 23 | 535 | - | - | |
Cmo12g00001 | 535 | Pfam | Aldehyde dehydrogenase family | 63 | 525 | IPR015590 | GO:0016491 | |
Cmo12g00001 | 535 | MobiDBLite | consensus disorder prediction | 26 | 40 | - | - | |
Cmo12g00001 | 535 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 329 | 340 | IPR016160 | GO:0016491 | |
Cmo12g00001 | 535 | MobiDBLite | consensus disorder prediction | 20 | 40 | - | - | |
Cmo12g00001 | 535 | SUPERFAMILY | ALDH-like | 51 | 530 | IPR016161 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00644 | Cmo-Chr10:2954680 | Cmo12g00001 | Cmo-Chr12:477 | 0 | dispersed | |
Cmo11g00602 | Cmo-Chr11:2906497 | Cmo12g00001 | Cmo-Chr12:477 | 0 | dispersed | |
Cmo12g00001 | Cmo-Chr12:477 | Cmo20g00311 | Cmo-Chr20:1515459 | 3.13E-108 | dispersed | |
Cmo05g00005 | Cmo-Chr5:19024 | Cmo12g00001 | Cmo-Chr12:477 | 0 | transposed | |
Cmo10g00162 | Cmo-Chr10:733141 | Cmo12g00001 | Cmo-Chr12:477 | 8.09E-115 | transposed | |
Cmo11g00105 | Cmo-Chr11:548605 | Cmo12g00001 | Cmo-Chr12:477 | 0 | transposed | |
Cmo13g00961 | Cmo-Chr13:8317712 | Cmo12g00001 | Cmo-Chr12:477 | 1.52E-12 | transposed | |
Cmo12g00001 | Cmo-Chr12:477 | Cmo05g00003 | Cmo-Chr5:13032 | 4.70E-23 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00001 | K00128 | - | csv:101202756 | 969.918 |