Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00037 ATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGCGCCAATGCTCTGGCTGTTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAGTCAATTAGCTCCACTGTTTCTGTTTTTGATGCAATGGGTTTACACAGATGGAAGACCCAACCTGTCAGCCCATGGAAGAAAGGCCACTCTCAAAGATTTTTATGCTGTGATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCCAGGGAGTTGGATAACGCTAAAGAGAAGCGTGTGGGAGTCGAAGGAGATGGAAAGCTCTCCAATGGTGATGTAGAGAGAGAAGAAGAATGTGGGATTTGCTTAGAAGCTTCCACAAAGATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGCTACCACAATTGGAACACGAGATCGGAGTCGTGCCCGTTTTGTCGGGGGAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGACACTGAAAAAGTCTCCAAGGAAGATCTGTCACGCTTCATCATCATGGAAAATGGCTTCTCTTCGCCTCGAAGCGATGTGTTTCCTGTCGGTCTTCGTGTTCTTGTTGTTGATGATGATCCAACATGGCTCAAAATCCTGGAAAAGATGCTCAAAAAGTGCTCTTATGAAGTGACTACATGTTGTCTGGCAAGGGAGGCTCTAAGCCTGCTAAGGGAGAGAAAAGATGGATACGACATCGTAATCAGCGACGTAAACATGCCCGACATGGACGGTTTTAAACTCCTCGAGCATGTAGGATTAGAAATGGACCTACCAGTTATCAAGCCCTCATTTCTTATGTATAAGTTCGTCTTCCTCCATGCAGTGATGTCAGTTGATGGAGAAACAAGCAGAGTAATGAAAGGGGTTCAACACGGGGCTTGTGATTATCTTCTAAAGCCAATACGAATGAAAGAACTTAGGAATATATGGCAGCATGTACTTCGAAAGAAGATTCAAGAGGGAAGAGATATTGAAGGCCATGATGTTTTTGAAGGCCTTCAAATCCTTAGAAATGGATCAGATAGGTATGATGATAGCCAGTTCCTTAGAGTAGAGGAGCTCTTTTCAGTGAGGAAAAGAAAAGATGTTGATAAGTACGAGGAAAAAGAGTTTGGTGAGACATGTTCTACAAAGAAAGCCAGAGTTGTTTGGTCGGTTGATCTGCACCAGAAATTTGTTGAAGCAGTAAACCAGATAGGCTTTGACAAAGTTGGCCCTAAGAAGATTCTTGATCTGATGAATGTCCCATGGCTAACAAGGGAAAATGTAGCTAGCCATTTGCAGAAGTATCGCCTCTATTTGAGTCGACTGCAGAAAGAAAATGATCCAAAAGCTTGCTTTGTTGTTGGGATGAAACAGACCGATTCGAGTTTGAAGGATGGAGATGGAAACTTCAGCGTTTGTAGCTCGTTAGGCGTGCCACAAACTGATGTCACGAATAGCAGCTTCAGTTTTTTGGGTGATAACTTTCTTCACAACGTGGATTCCATAGGATGTGAAGCTGATAGGAAAAGGGTTGTTCAAGAACAAACATCAGAGCCAAAAAGAGCTGCTGCTACTGAACTGATAAAGACACGGTGTACCCACATGAAATTCAACAACTCGTTTGCCTCTGTTGAATCTGAAGGCAAGTTAGTAGCATGTTACCCTTGGGTTGAAGCTCCACAGATGAAGCTCAAACAAGAAAGCAAGCCACATCAAGTTCAAATCAACCAACTACCATCGGTTTCGTCCATTAGTTCTGGACGGTCAGCAACAGAGAAAGACAAAGGAAGCTCCATTGAAAGTAAGGACTGTAGCCAACAAATGGTCCATCTAAACCCACCAAAACCTCCAACTGATTCGTTTTCTGGCAAGGCTAAGAGTTTCAATGAGATCAATGACCATTTTGAGCCTATTTCAACTGCTACTGCTCCATTGGGCGTGAAAAACCAGAATGTGATCGATCTTAGCAGCATTTCAACTGATTTAGGAAGTGGGTTTCCTTTTTCAAGCTTTGATGAAGATTTGCAGGGCTATTTGATTCAAGATGGTTGTTACCCAAAGAACCTTGAACAGATTATAGAGTTTCCAGATTATGGTGATCCAGGCATCTTCACTGAAGGTCCGACTCACCTTTATGATGCAATGAGGTTTGGCTATGAGTATTCCTATGACCCAACTGAGTATCCAGTGATAGATGAAGGCCTATTCATCGCATGA 2298 43.04 MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANARELDNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFIIMENGFSSPRSDVFPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIKPSFLMYKFVFLHAVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKKIQEGRDIEGHDVFEGLQILRNGSDRYDDSQFLRVEELFSVRKRKDVDKYEEKEFGETCSTKKARVVWSVDLHQKFVEAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDPKACFVVGMKQTDSSLKDGDGNFSVCSSLGVPQTDVTNSSFSFLGDNFLHNVDSIGCEADRKRVVQEQTSEPKRAAATELIKTRCTHMKFNNSFASVESEGKLVACYPWVEAPQMKLKQESKPHQVQINQLPSVSSISSGRSATEKDKGSSIESKDCSQQMVHLNPPKPPTDSFSGKAKSFNEINDHFEPISTATAPLGVKNQNVIDLSSISTDLGSGFPFSSFDEDLQGYLIQDGCYPKNLEQIIEFPDYGDPGIFTEGPTHLYDAMRFGYEYSYDPTEYPVIDEGLFIA 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 209888 216840 - CmoCh12G000370.1 Cmo12g00037 392725

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00037 765 Gene3D - 216 391 - -
Cmo12g00037 765 SUPERFAMILY RING/U-box 118 169 - -
Cmo12g00037 765 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR11 201 722 - -
Cmo12g00037 765 MobiDBLite consensus disorder prediction 594 619 - -
Cmo12g00037 765 ProSiteProfiles Response regulatory domain profile. 217 346 IPR001789 GO:0000160
Cmo12g00037 765 ProSiteProfiles Zinc finger RING-type profile. 125 163 IPR001841 -
Cmo12g00037 765 CDD REC_typeB_ARR-like 218 346 - -
Cmo12g00037 765 Pfam Myb-like DNA-binding domain 413 463 IPR001005 -
Cmo12g00037 765 ProSitePatterns Zinc finger RING-type signature. 140 149 IPR017907 -
Cmo12g00037 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 174 IPR013083 -
Cmo12g00037 765 SUPERFAMILY Homeodomain-like 409 468 IPR009057 -
Cmo12g00037 765 SUPERFAMILY CheY-like 215 353 IPR011006 -
Cmo12g00037 765 SMART REC_2 216 342 IPR001789 GO:0000160
Cmo12g00037 765 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 411 464 IPR006447 GO:0003677
Cmo12g00037 765 Gene3D - 407 470 - -
Cmo12g00037 765 MobiDBLite consensus disorder prediction 592 649 - -
Cmo12g00037 765 Pfam Response regulator receiver domain 218 341 IPR001789 GO:0000160
Cmo12g00037 765 Pfam Zinc finger, C3HC4 type (RING finger) 122 168 - -
Cmo12g00037 765 SMART ring_2 125 162 IPR001841 -
Cmo12g00037 765 PANTHER TWO-COMPONENT RESPONSE REGULATOR 201 722 IPR045279 GO:0009736
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00037 - - K14491 csv:101204370 897.886
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00069 Cmo-Chr5:252742 Cmo12g00037 Cmo-Chr12:209888 5.44E-115 dispersed
Cmo12g00037 Cmo-Chr12:209888 Cmo08g01225 Cmo-Chr8:7770459 2.46E-89 dispersed
Cmo05g00070 Cmo-Chr5:259045 Cmo12g00037 Cmo-Chr12:209888 0 transposed
Cmo12g00037 Cmo-Chr12:209888 Cmo18g00712 Cmo-Chr18:8951379 1.09E-81 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo10g00516 CST 59 324 Response Regulator Gene Family AT3G16857 50.4 6.4e-60 229.6
Cmo05g00070 . 54 258 Response Regulator Gene Family AT3G16857 51.8 3.8e-52 203.8
Cmo09g00426 . 1 374 Response Regulator Gene Family AT4G31920 54.2 1.3e-88 324.7
Cmo10g00516 CST 18 363 Response Regulator Gene Family AT4G31920 57.1 4.2e-87 319.7
Cmo11g00476 CST 18 399 Response Regulator Gene Family AT4G31920 52.8 6.0e-86 315.8
Cmo12g01197 . 54 376 Response Regulator Gene Family AT4G31920 52.5 5.0e-80 296.2
Cmo17g00339 CCT,CST,ECH 41 320 Response Regulator Gene Family AT4G31920 52.4 3.8e-72 270.0
Cmo08g01225 CCT,CST,ECH 25 289 Response Regulator Gene Family AT4G31920 54.0 5.0e-72 269.6
Cmo14g01636 CCT,ECH 16 272 Response Regulator Gene Family AT4G31920 53.8 5.1e-69 259.6
Cmo06g01548 . 19 270 Response Regulator Gene Family AT4G31920 54.9 8.8e-69 258.8
Cmo05g00070 . 13 261 Response Regulator Gene Family AT4G31920 52.0 8.5e-64 242.3
Cmo06g01548 . 99 261 Response Regulator Gene Family AT1G67710 53.3 2.0e-39 161.0
Cmo09g00426 . 93 256 Response Regulator Gene Family AT1G67710 52.9 4.5e-39 159.8
Cmo01g01702 . 93 256 Response Regulator Gene Family AT1G67710 52.9 2.2e-38 157.5
Cmo09g00426 . 1 374 Response Regulator Gene Family AT2G25180 61.4 3.9e-107 386.3
Cmo11g00476 CST 16 403 Response Regulator Gene Family AT2G25180 53.3 3.7e-97 353.2
Cmo10g00516 CST 16 372 Response Regulator Gene Family AT2G25180 54.3 2.6e-90 330.5
Cmo12g01197 . 55 389 Response Regulator Gene Family AT2G25180 55.7 1.0e-86 318.5
Cmo14g01636 CCT,ECH 18 292 Response Regulator Gene Family AT2G25180 54.6 1.6e-76 284.6
Cmo08g01225 CCT,CST,ECH 27 289 Response Regulator Gene Family AT2G25180 57.1 8.0e-76 282.3
Cmo17g00339 CCT,CST,ECH 41 298 Response Regulator Gene Family AT2G25180 57.5 1.2e-74 278.5
Cmo05g00070 . 13 258 Response Regulator Gene Family AT2G25180 54.8 3.0e-67 253.8
Cmo12g00037 . 210 469 Response Regulator Gene Family AT2G25180 51.9 4.4e-66 250.0
Cmo17g00339 CCT,CST,ECH 102 337 Response Regulator Gene Family AT2G01760 51.0 3.9e-53 206.1
Cmo06g01548 . 79 308 Response Regulator Gene Family AT2G01760 50.4 5.1e-53 205.7
Cmo10g00516 CST 79 282 Response Regulator Gene Family AT2G01760 55.8 9.9e-49 191.4
Cmo05g00070 . 74 261 Response Regulator Gene Family AT2G01760 51.0 3.2e-47 186.4
Cmo11g00476 CST 79 295 Response Regulator Gene Family AT2G01760 52.3 5.1e-45 179.1
Cmo01g01702 . 8 314 Response Regulator Gene Family AT5G58080 57.4 7.0e-78 289.3
Cmo17g00339 CCT,CST,ECH 41 285 Response Regulator Gene Family AT5G58080 55.7 6.1e-66 249.6
Cmo05g00070 . 11 260 Response Regulator Gene Family AT5G58080 51.0 5.4e-62 236.5
Cmo08g01225 CCT,CST,ECH 26 251 Response Regulator Gene Family AT4G16110 66.7 5.0e-79 293.1
Cmo17g00339 CCT,CST,ECH 41 265 Response Regulator Gene Family AT4G16110 67.0 1.1e-78 292.0
Cmo14g01636 CCT,ECH 18 243 Response Regulator Gene Family AT4G16110 66.1 2.1e-77 287.7
Cmo06g01548 . 20 241 Response Regulator Gene Family AT4G16110 66.7 2.8e-77 287.3
Cmo01g01702 . 11 234 Response Regulator Gene Family AT4G16110 58.3 9.6e-62 235.7
Cmo09g00426 . 11 234 Response Regulator Gene Family AT4G16110 59.5 2.1e-61 234.6
Cmo05g00070 . 12 237 Response Regulator Gene Family AT4G16110 54.0 2.9e-58 224.2
Cmo10g00516 CST 10 249 Response Regulator Gene Family AT4G16110 55.2 1.9e-57 221.5
Cmo11g00476 CST 17 249 Response Regulator Gene Family AT4G16110 55.1 4.2e-57 220.3
Cmo12g00037 . 209 448 Response Regulator Gene Family AT4G16110 51.0 2.3e-55 214.5
Cmo12g01197 . 56 302 Response Regulator Gene Family AT4G16110 54.4 1.2e-51 202.2
Cmo10g00165 . 3 172 Response Regulator Gene Family AT3G48100 64.3 4.5e-54 208.4
Cmo04g00318 . 29 173 Response Regulator Gene Family AT3G48100 70.3 9.5e-52 200.7
Cmo04g01675 . 29 162 Response Regulator Gene Family AT3G48100 72.4 1.4e-50 196.8
Cmo04g02298 . 15 156 Response Regulator Gene Family AT3G48100 59.2 4.9e-40 161.8
Cmo07g01403 CST 10 165 Response Regulator Gene Family AT3G48100 53.8 1.1e-39 160.6
Cmo15g00865 . 11 154 Response Regulator Gene Family AT3G48100 57.6 1.4e-39 160.2
Cmo14g00521 . 3 155 Response Regulator Gene Family AT3G48100 52.9 2.4e-39 159.5
Cmo04g02481 CST 19 175 Response Regulator Gene Family AT3G48100 53.2 3.5e-38 155.6
Cmo04g01675 . 1 175 Response Regulator Gene Family AT1G59940 65.9 1.6e-57 220.7
Cmo04g00318 . 1 168 Response Regulator Gene Family AT1G59940 65.7 4.2e-55 212.6
Cmo10g00165 . 7 152 Response Regulator Gene Family AT1G59940 65.5 6.5e-48 188.7
Cmo04g02298 . 9 157 Response Regulator Gene Family AT1G59940 58.4 3.8e-40 162.9
Cmo14g00521 . 8 153 Response Regulator Gene Family AT1G59940 56.8 6.5e-40 162.2
Cmo15g00865 . 5 155 Response Regulator Gene Family AT1G59940 56.3 9.5e-39 158.3
Cmo04g02481 CST 19 161 Response Regulator Gene Family AT1G59940 57.6 3.6e-38 156.4
Cmo07g01403 CST 11 163 Response Regulator Gene Family AT1G59940 52.3 6.1e-38 155.6
Cmo04g01404 . 9 160 Response Regulator Gene Family AT1G59940 57.2 8.0e-38 155.2
Cmo04g01675 . 16 199 Response Regulator Gene Family AT1G10470 64.7 6.5e-56 214.9
Cmo04g00318 . 23 187 Response Regulator Gene Family AT1G10470 67.9 3.9e-53 205.7
Cmo10g00165 . 21 152 Response Regulator Gene Family AT1G10470 71.2 1.6e-46 183.7
Cmo14g00521 . 10 153 Response Regulator Gene Family AT1G10470 57.6 1.9e-39 160.2
Cmo04g02298 . 15 162 Response Regulator Gene Family AT1G10470 56.8 4.2e-39 159.1
Cmo07g01403 CST 17 177 Response Regulator Gene Family AT1G10470 54.3 1.2e-38 157.5
Cmo15g00865 . 11 160 Response Regulator Gene Family AT1G10470 57.3 3.6e-38 156.0
Cmo04g02481 CST 19 165 Response Regulator Gene Family AT1G10470 54.1 8.8e-37 151.4
Cmo04g01404 . 11 182 Response Regulator Gene Family AT1G10470 50.6 2.0e-36 150.2
Cmo10g00165 . 3 172 Response Regulator Gene Family AT3G48100 64.3 4.5e-54 208.4
Cmo04g00318 . 29 173 Response Regulator Gene Family AT3G48100 70.3 9.5e-52 200.7
Cmo04g01675 . 29 162 Response Regulator Gene Family AT3G48100 72.4 1.4e-50 196.8
Cmo04g02298 . 15 156 Response Regulator Gene Family AT3G48100 59.2 4.9e-40 161.8
Cmo07g01403 CST 10 165 Response Regulator Gene Family AT3G48100 53.8 1.1e-39 160.6
Cmo15g00865 . 11 154 Response Regulator Gene Family AT3G48100 57.6 1.4e-39 160.2
Cmo14g00521 . 3 155 Response Regulator Gene Family AT3G48100 52.9 2.4e-39 159.5
Cmo04g02481 CST 19 175 Response Regulator Gene Family AT3G48100 53.2 3.5e-38 155.6
Cmo04g00318 . 11 158 Response Regulator Gene Family AT5G62920 67.6 9.0e-50 194.1
Cmo10g00165 . 24 172 Response Regulator Gene Family AT5G62920 67.8 1.5e-49 193.4
Cmo04g01675 . 25 168 Response Regulator Gene Family AT5G62920 68.8 7.6e-49 191.0
Cmo04g02298 . 15 156 Response Regulator Gene Family AT5G62920 59.2 3.8e-40 162.2
Cmo07g01403 CST 12 165 Response Regulator Gene Family AT5G62920 53.9 2.4e-39 159.5
Cmo14g00521 . 10 155 Response Regulator Gene Family AT5G62920 55.5 4.2e-39 158.7
Cmo15g00865 . 11 154 Response Regulator Gene Family AT5G62920 59.0 7.1e-39 157.9
Cmo04g02481 CST 19 175 Response Regulator Gene Family AT5G62920 53.2 6.7e-37 151.4
Cmo10g00165 . 23 171 Response Regulator Gene Family AT1G19050 68.9 1.5e-50 196.8
Cmo04g01675 . 15 185 Response Regulator Gene Family AT1G19050 57.0 2.5e-45 179.5
Cmo04g00318 . 15 186 Response Regulator Gene Family AT1G19050 56.6 1.3e-44 177.2
Cmo04g02298 . 9 159 Response Regulator Gene Family AT1G19050 53.0 1.3e-38 157.1
Cmo14g00521 . 8 155 Response Regulator Gene Family AT1G19050 54.1 2.3e-38 156.4
Cmo07g01403 CST 11 165 Response Regulator Gene Family AT1G19050 51.6 3.9e-38 155.6
Cmo15g00865 . 3 157 Response Regulator Gene Family AT1G19050 50.3 1.1e-37 154.1
Cmo04g02481 CST 19 160 Response Regulator Gene Family AT1G19050 56.6 1.6e-36 150.2
Cmo14g00521 . 1 157 Response Regulator Gene Family AT2G41310 73.2 4.1e-57 218.8
Cmo07g01403 CST 8 167 Response Regulator Gene Family AT2G41310 68.1 9.5e-54 207.6
Cmo04g02298 . 12 158 Response Regulator Gene Family AT2G41310 66.7 2.0e-48 189.9
Cmo15g00865 . 8 156 Response Regulator Gene Family AT2G41310 65.3 2.0e-48 189.9
Cmo04g01404 . 3 164 Response Regulator Gene Family AT2G41310 61.7 3.3e-46 182.6
Cmo04g02481 CST 11 160 Response Regulator Gene Family AT2G41310 59.9 5.2e-44 175.3
Cmo04g00318 . 25 158 Response Regulator Gene Family AT2G41310 58.9 3.7e-42 169.1
Cmo04g01675 . 25 158 Response Regulator Gene Family AT2G41310 59.6 3.2e-41 166.0
Cmo10g00165 . 22 150 Response Regulator Gene Family AT2G41310 60.6 5.1e-39 158.7
Cmo14g00521 . 1 159 Response Regulator Gene Family AT3G57040 76.7 1.9e-60 229.9
Cmo07g01403 CST 8 175 Response Regulator Gene Family AT3G57040 69.0 1.8e-55 213.4
Cmo04g02298 . 12 158 Response Regulator Gene Family AT3G57040 68.0 2.3e-50 196.4
Cmo15g00865 . 1 156 Response Regulator Gene Family AT3G57040 66.7 2.3e-50 196.4
Cmo04g01404 . 4 164 Response Regulator Gene Family AT3G57040 63.2 8.1e-48 188.0
Cmo04g02481 CST 15 183 Response Regulator Gene Family AT3G57040 56.4 2.9e-45 179.5
Cmo04g00318 . 25 158 Response Regulator Gene Family AT3G57040 60.1 7.1e-44 174.9
Cmo04g01675 . 25 158 Response Regulator Gene Family AT3G57040 59.4 1.7e-42 170.2
Cmo10g00165 . 22 150 Response Regulator Gene Family AT3G57040 60.4 3.1e-39 159.5
Cmo10g00165 . 16 171 Response Regulator Gene Family AT1G74890 69.8 2.8e-52 202.6
Cmo04g01675 . 25 187 Response Regulator Gene Family AT1G74890 61.8 2.7e-47 186.0
Cmo04g00318 . 25 188 Response Regulator Gene Family AT1G74890 60.8 2.7e-47 186.0
Cmo15g00865 . 7 149 Response Regulator Gene Family AT1G74890 56.6 3.5e-39 159.1
Cmo14g00521 . 8 153 Response Regulator Gene Family AT1G74890 55.5 7.9e-39 157.9
Cmo07g01403 CST 12 158 Response Regulator Gene Family AT1G74890 56.5 1.0e-38 157.5
Cmo04g02298 . 15 151 Response Regulator Gene Family AT1G74890 58.4 2.3e-38 156.4
Cmo04g01404 . 5 165 Response Regulator Gene Family AT1G74890 53.4 2.5e-37 152.9
Cmo04g00318 . 26 159 Response Regulator Gene Family AT2G40670 56.2 3.4e-40 162.2
Cmo04g01675 . 26 159 Response Regulator Gene Family AT2G40670 55.5 3.7e-39 158.7
Cmo04g00099 . 16 186 Response Regulator Gene Family AT2G40670 52.3 3.7e-39 158.7
Cmo14g00521 . 6 155 Response Regulator Gene Family AT2G40670 55.0 4.8e-39 158.3
Cmo04g00318 . 26 159 Response Regulator Gene Family AT3G56380 55.6 6.3e-41 164.5
Cmo04g01675 . 26 159 Response Regulator Gene Family AT3G56380 54.8 4.1e-40 161.8
Cmo04g00099 . 16 186 Response Regulator Gene Family AT3G56380 52.9 7.0e-40 161.0
Cmo14g00521 . 6 155 Response Regulator Gene Family AT3G56380 53.0 7.7e-39 157.5
Cmo10g00165 . 10 148 Response Regulator Gene Family AT3G56380 58.2 3.8e-38 155.2
Cmo04g02298 . 15 159 Response Regulator Gene Family AT3G56380 54.1 9.4e-37 150.6
Cmo04g02481 CST 11 157 Response Regulator Gene Family AT3G56380 52.3 9.4e-37 150.6
Cmo04g01404 . 3 155 Response Regulator Gene Family AT3G56380 52.3 9.4e-37 150.6
Cmo10g00516 CST 59 324 Response Regulator Gene Family AT3G16857 50.4 6.4e-60 229.6
Cmo05g00070 . 54 258 Response Regulator Gene Family AT3G16857 51.8 3.8e-52 203.8
Cmo08g01225 CCT,CST,ECH 26 251 Response Regulator Gene Family AT4G16110 66.7 5.0e-79 293.1
Cmo17g00339 CCT,CST,ECH 41 265 Response Regulator Gene Family AT4G16110 67.0 1.1e-78 292.0
Cmo14g01636 CCT,ECH 18 243 Response Regulator Gene Family AT4G16110 66.1 2.1e-77 287.7
Cmo06g01548 . 20 241 Response Regulator Gene Family AT4G16110 66.7 2.8e-77 287.3
Cmo01g01702 . 11 234 Response Regulator Gene Family AT4G16110 58.3 9.6e-62 235.7
Cmo09g00426 . 11 234 Response Regulator Gene Family AT4G16110 59.5 2.1e-61 234.6
Cmo05g00070 . 12 237 Response Regulator Gene Family AT4G16110 54.0 2.9e-58 224.2
Cmo10g00516 CST 10 249 Response Regulator Gene Family AT4G16110 55.2 1.9e-57 221.5
Cmo11g00476 CST 17 249 Response Regulator Gene Family AT4G16110 55.1 4.2e-57 220.3
Cmo12g00037 . 209 448 Response Regulator Gene Family AT4G16110 51.0 2.3e-55 214.5
Cmo12g01197 . 56 302 Response Regulator Gene Family AT4G16110 54.4 1.2e-51 202.2
Cmo09g00426 . 1 374 Response Regulator Gene Family AT4G31920 54.2 1.3e-88 324.7
Cmo10g00516 CST 18 363 Response Regulator Gene Family AT4G31920 57.1 4.2e-87 319.7
Cmo11g00476 CST 18 399 Response Regulator Gene Family AT4G31920 52.8 6.0e-86 315.8
Cmo12g01197 . 54 376 Response Regulator Gene Family AT4G31920 52.5 5.0e-80 296.2
Cmo17g00339 CCT,CST,ECH 41 320 Response Regulator Gene Family AT4G31920 52.4 3.8e-72 270.0
Cmo08g01225 CCT,CST,ECH 25 289 Response Regulator Gene Family AT4G31920 54.0 5.0e-72 269.6
Cmo14g01636 CCT,ECH 16 272 Response Regulator Gene Family AT4G31920 53.8 5.1e-69 259.6
Cmo06g01548 . 19 270 Response Regulator Gene Family AT4G31920 54.9 8.8e-69 258.8
Cmo05g00070 . 13 261 Response Regulator Gene Family AT4G31920 52.0 8.5e-64 242.3
Cmo06g01548 . 99 261 Response Regulator Gene Family AT1G67710 53.3 2.0e-39 161.0
Cmo09g00426 . 93 256 Response Regulator Gene Family AT1G67710 52.9 4.5e-39 159.8
Cmo01g01702 . 93 256 Response Regulator Gene Family AT1G67710 52.9 2.2e-38 157.5
Cmo09g00426 . 1 374 Response Regulator Gene Family AT2G25180 61.4 3.9e-107 386.3
Cmo11g00476 CST 16 403 Response Regulator Gene Family AT2G25180 53.3 3.7e-97 353.2
Cmo10g00516 CST 16 372 Response Regulator Gene Family AT2G25180 54.3 2.6e-90 330.5
Cmo12g01197 . 55 389 Response Regulator Gene Family AT2G25180 55.7 1.0e-86 318.5
Cmo14g01636 CCT,ECH 18 292 Response Regulator Gene Family AT2G25180 54.6 1.6e-76 284.6
Cmo08g01225 CCT,CST,ECH 27 289 Response Regulator Gene Family AT2G25180 57.1 8.0e-76 282.3
Cmo17g00339 CCT,CST,ECH 41 298 Response Regulator Gene Family AT2G25180 57.5 1.2e-74 278.5
Cmo05g00070 . 13 258 Response Regulator Gene Family AT2G25180 54.8 3.0e-67 253.8
Cmo12g00037 . 210 469 Response Regulator Gene Family AT2G25180 51.9 4.4e-66 250.0
Cmo17g00339 CCT,CST,ECH 102 337 Response Regulator Gene Family AT2G01760 51.0 3.9e-53 206.1
Cmo06g01548 . 79 308 Response Regulator Gene Family AT2G01760 50.4 5.1e-53 205.7
Cmo10g00516 CST 79 282 Response Regulator Gene Family AT2G01760 55.8 9.9e-49 191.4
Cmo05g00070 . 74 261 Response Regulator Gene Family AT2G01760 51.0 3.2e-47 186.4
Cmo11g00476 CST 79 295 Response Regulator Gene Family AT2G01760 52.3 5.1e-45 179.1
Cmo01g01702 . 8 314 Response Regulator Gene Family AT5G58080 57.4 7.0e-78 289.3
Cmo17g00339 CCT,CST,ECH 41 285 Response Regulator Gene Family AT5G58080 55.7 6.1e-66 249.6
Cmo05g00070 . 11 260 Response Regulator Gene Family AT5G58080 51.0 5.4e-62 236.5
Cmo01g00841 . 6 572 Response Regulator Gene Family AT5G61380 50.4 9.6e-141 498.0
Cmo07g00992 . 40 216 Response Regulator Gene Family AT5G60100 70.8 2.9e-61 233.4
Cmo03g00476 . 38 205 Response Regulator Gene Family AT5G60100 67.9 1.7e-53 207.6
Cmo15g01055 CST 35 170 Response Regulator Gene Family AT5G60100 58.8 8.9e-42 168.7
Cmo14g02228 . 59 193 Response Regulator Gene Family AT5G60100 60.0 1.7e-40 164.5
Cmo07g00992 . 69 212 Response Regulator Gene Family AT5G24470 56.3 1.6e-41 168.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007972 0 1 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 2 1 1 1 1 1 2 1 3 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10683 PF00072 Response_reg 8.90E-18 CL0304 Cmo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo12g00037 Cmo_Chr12 FPKM 2.212 2.244093 1.657835 1.835291 6.729897 8.168285 6.509432 0.701461 0.758567 0.755321