Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00082 ATGCAGAAGGATATGAACAATATTGGGGTAAAGAAGAGAGGTCATGGGAATCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCAGAGGTTTTGGAGCTTGAGAAGGCTACTATAATGAGGCATTGTTCTTTACCTTCAAGAGATATGCGACTTTTGGATCCGCTCTTCCTTTGCCCGTCCACAATTCTCGGGAGGGAGAAGGCGATCGTTGTCAGTCTCGAGCAAATTCGGTGTATAATCACAGCTGATGAGGTGATTCTGATGAACTCCTTAGATGGATGTGCTGCTCAGTACAAGGCAGAGCTGTGCAAGCGTCTCCATGCAAGTAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCGCTGGAACTTACTTGTTCATTTCTTGACACTCAGATGAAGGGGATGGAAATCGAGATATACCCTCTACTGGATGCTTTAGCGTCTTCAATAAACACGCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGTCCTTGACTCAACAAGTGCAAAAGGTTCGTGATGAAGTCGAGCATCTGATGGACGATGATGGGGATATGGCAGAGATGTTTCTGACAGAAAAGAAACAAAGATTGGAGGCGAACATCCGAAGTAACTTGTATCTCGAAACTAGTTTCTTCGGGAAACCAAAATCTGCTCCTGTTTCACCAGTGGGTTCGACCAATGGATCTTATAAATTACAAAGGGCTTTTAGCAGTATTGTAAACTCGAGCAGCTTGATGAGTTCATCAAACGGTGGTGATAACGTCGAACAATTGGAGATGCTGCTCGAGGCGTACTTCGTGGTTATTGACGACATGCTCAGTAAATTGTTATCGCTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTCCAGGTGCTTTTCACTGCAGCTACGTTCTTGGCTACGATGTTTGCAGCGTTAACTGCAGTTTTCGGCATGAATTTTTCCGACGATGTCTTCGAGCATCCGACTTCTTTCCAGTGGATAGTTTACTTGACCTTGATTGCCTGTGGCCTTGTGTTTATCTCTTTTCTATTCTATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1146 43.11 MQKDMNNIGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITADEVILMNSLDGCAAQYKAELCKRLHASKDQSDDLPFEFRALELALELTCSFLDTQMKGMEIEIYPLLDALASSINTLNLERVRRFKGNLLSLTQQVQKVRDEVEHLMDDDGDMAEMFLTEKKQRLEANIRSNLYLETSFFGKPKSAPVSPVGSTNGSYKLQRAFSSIVNSSSLMSSSNGGDNVEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQVLFTAATFLATMFAALTAVFGMNFSDDVFEHPTSFQWIVYLTLIACGLVFISFLFYFRYKKIFPL 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 443820 448418 - CmoCh12G000820.1 Cmo12g00082 392770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00082 381 Coils Coil 165 192 - -
Cmo12g00082 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 381 IPR039204 -
Cmo12g00082 381 CDD Mrs2_Mfm1p-like 20 378 IPR039204 -
Cmo12g00082 381 Gene3D Magnesium transport protein CorA, transmembrane region 94 312 - -
Cmo12g00082 381 Gene3D - 5 91 - -
Cmo12g00082 381 PANTHER MAGNESIUM TRANSPORTER MRS2-5 6 381 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00082 Cmo-Chr12:443820 Cmo14g01066 Cmo-Chr14:5873476 1.49E-145 dispersed
Cmo12g00082 Cmo-Chr12:443820 Cmo01g00196 Cmo-Chr1:883750 2.48E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00082 K16075 - csv:101220835 632.869