Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00085 ATGCTGACTTCGTTCATGGATGCCACGGAATATTCTCCTGATAAGGTGGACAGGTGCTTGTTTGATGCTTGTTTGGGGGAGGGATTTATTCTCTTAGAACATTGTTTGGCTACACATCTACGTGCAGTGTGTAGTCGTCTCCTTGTCTTCTACTTGGCGCCAAACCAGACTCAACCAACCATGTCATCACCAAACTTCCAAACCTTTCTTCTCCATTTCCCTTCTTCCATTTCCCAAAGCTTCCCAGCCCTTCTCTCCGCGCTTCTGCTTCTCTCCATTTTTGCCTTCTTCCTTCACCCCGGCGGCCTCGCTTGGGCCCTTTCCAAGTCCAAAACCGCCGCCTCTGCCGCCATCCCGGGGCCCTCCGGCTTCCCATTCATCGGTCTCCTCCATGTCTTCACTCTCTCAAAAACCCCTCACAAAGCCCTCTCTGCACTTTCCAATAAATTCAAAGCACACCCTTTAATGGCCTTCTCTGTTGGCCTAACCAAATTCGTAATTTCAAGCCACCCGGATTTTGCCAAGGAAATTCTCAATAGCGCTTCCTTTGCTGATAGGCCTGTGAAGGAATCCGCTTATGAACTTCTTTTCCACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGAAGGATTTCAGCTACTTATATGTTTAGTCCTAAGAGAATAGGTGCATTTGAAGGGTTTAGAAGGGAAGTTGGAGGGAAAATGATAAGGGAAGTTGAGAATTCCATGGCTTTGAATGGGGAAGTTAGAGTTAAGGAGATTCTTCATTTTGGGTCTTTGAATAATGTTATGATGACTGTTTTTGGTAAGTGTTATGAGTTTAGTGGATTGGGGAAGGATGGGGTTGAGCTTGAGGAACTGGTGAGTGAAGGGTATGAATTGCTTGGGATTTTCAATTGGAGTGATCATTTTCCCTTTCTGGGTTGGCTGGATTTACAAGGTGTGAGGAAAAGATGTAGGTGTTTGGCTTCTAAAGTGAATGTTTTTGTGGGAAAAATCATTGACGAACATAGAATGAGGAGGAAAGTTAAGCCACACCACGAACACGAAGAACACGAACAAGAACAAGAACATAATCGAGACTTTGTTGATGTCCTACTTGATATGGAGAAAGATGACAAGCTCTCAGATTCCGACATGATTGCTGTTCTTTGGGAAATGATTTTTCGAGGAACAGACACAGTCGCAATACTGTTGGAATGGATCATAGCTCGAATGGTTCTACACCCAGAAATCCAAACCAAAGCTCAAAACGAAATCGATTCAGTAATCGGCAAAAGATCCAAACCCATTTCAGATTCTGATATCCCAAATCTTCCATTTCTTCAATCCATTGTCAAAGAGTGTTTAAGACTGCACCCACCAGGTCCACTTCTATCATGGGCCAGGCTCGCAGTCAACGACGTGGACGTCGGCGGGAGGCTGATTCCTGCCGGGGCGACGGCGATGGTGAACATGTGGGCAATAACACACAACGAAAAGGTTTGGTCAGAGGCTGAGAAGTTCAAGCCAAATAGGTTCATGGAAGAGGAAGTGAGTGTTATGGGAAGTGATTTGAGATTGGCTCCATTTGGGGCAGGGAGAAGAGTGTGCCCTGGAAAAGCCATGGGATTGGCCACTGTTCATCTCTGGTTGGCTCAGTTTCTTCAAGCTTTCAAGTGGGTTCCCTCTGAAAAGGGCATTAATGGCGTTGACTTGTCAGAATGTCTCAAACTCTCTTTGGAAATGCAAACTCCATTGATTTGCAGAGCTATCCCTAGGATCCAGATCCAGAAAACCCGATTATCCAAATGGCCCAAGAACAATCTCAAATCTCTCTCTATATATATAATCGTCGTCTCCGTTCTCTTCGCTCCAAGTCTAATCCGAGTCTTCTCTTCTCTGATTGAAGCTTCTGCTACTCTGAAATTGGTTAACAATGGCGGAAGCTTCGGTAAAACCCACTCCCTTTTGAAAGATGAACTCGATATCGTCATCCCTACCATCCGGAACCTCGATTTCTTGGAGATGTGGAGACCGTTCTTCGAGCAATACCATTTGATCATCGTTCAAGATGGTGATCCTTCGAAGACCATTAAGGTCCCTGAAGGATTCGATTATGAACTCTATAATCGGAACGATATCAATCGGATTCTTGGTCCGAAGGCCTCGTGCATTTCGTTTAAGGATTCTGCTTGTCGATGCTTTGGATATATGGTTTCCAAGAAGAAGTACATCTACACAATCGACGATGATTGCTTTGTTGCGAAGGACCCGTCGAACAAGGATATCAATGCGCTCGAGCAGCACATAAAGAACCTTCTATCACCAGCCACACCAAATTTCTTCAACACTCTGTATGATCCATACAGAGAAGGTGCAGATTTTGTGCGTGGATACCCTTTCAGTCTTCGTGAGGGTGTCCCGACCGCAGTTTCTCATGGACTCTGGCTTAACATTCCTGACTACGATGCTCCAACGCAGCTCGTCAAGCCTCGTGAAAGGAACTCTAGGTATGTAGATGCAGTGTTGACAATTCCCAAGGGAACCTTGTTTCCCATGTGTGGAATGAATCTCGGATTCAACCGTGAACTGATCGGACCTGCTATGTATTTTGGACTCATGGGAGACGGTCAGCCGATAGGACGATACGACGACATGTGGGCTGGTTGGTGTGTGAAGGTGATTTGTGACCATATGGGGTGGGGAGTTAAGACAGGACTGCCTTACATATGGCACAGCAAAGCCAGCAACCCATTCACCAACCTGAGAAAGGAGTACAAAGGGATCTTCTGGCAAGAAGATCTGATCCCGTTCTTCCAATCGGTCGTCCTCCCGAAAGAATGCACAACGGTTCAGAAATGCTACATCGAACTGTCGAAGCTAGTGAAGGAGAAGCTCGGCCCCATCGATCCCTACTTCGTTAAGCTCTCCGAGGCAATGGTCACTTGGATTGAAGCTTGGGATGAGCTCAACCCTGCTGGAGACGCCTCCAAGTAG 2997 46.18 MLTSFMDATEYSPDKVDRCLFDACLGEGFILLEHCLATHLRAVCSRLLVFYLAPNQTQPTMSSPNFQTFLLHFPSSISQSFPALLSALLLLSIFAFFLHPGGLAWALSKSKTAASAAIPGPSGFPFIGLLHVFTLSKTPHKALSALSNKFKAHPLMAFSVGLTKFVISSHPDFAKEILNSASFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFSPKRIGAFEGFRREVGGKMIREVENSMALNGEVRVKEILHFGSLNNVMMTVFGKCYEFSGLGKDGVELEELVSEGYELLGIFNWSDHFPFLGWLDLQGVRKRCRCLASKVNVFVGKIIDEHRMRRKVKPHHEHEEHEQEQEHNRDFVDVLLDMEKDDKLSDSDMIAVLWEMIFRGTDTVAILLEWIIARMVLHPEIQTKAQNEIDSVIGKRSKPISDSDIPNLPFLQSIVKECLRLHPPGPLLSWARLAVNDVDVGGRLIPAGATAMVNMWAITHNEKVWSEAEKFKPNRFMEEEVSVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQFLQAFKWVPSEKGINGVDLSECLKLSLEMQTPLICRAIPRIQIQKTRLSKWPKNNLKSLSIYIIVVSVLFAPSLIRVFSSLIEASATLKLVNNGGSFGKTHSLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSNKDINALEQHIKNLLSPATPNFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNSRYVDAVLTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHMGWGVKTGLPYIWHSKASNPFTNLRKEYKGIFWQEDLIPFFQSVVLPKECTTVQKCYIELSKLVKEKLGPIDPYFVKLSEAMVTWIEAWDELNPAGDASK 998
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 453319 463682 - CmoCh12G000850.1 Cmo12g00085 392773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00085 998 PRINTS E-class P450 group I signature 385 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS E-class P450 group I signature 527 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS E-class P450 group I signature 405 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS E-class P450 group I signature 491 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS E-class P450 group I signature 537 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PANTHER CYTOCHROME P450 78A7-RELATED 69 593 - -
Cmo12g00085 998 Gene3D Cytochrome P450 105 589 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PANTHER CYTOCHROME P450 78A5 69 593 - -
Cmo12g00085 998 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS P450 superfamily signature 528 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 PRINTS P450 superfamily signature 396 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 Pfam Cytochrome P450 119 565 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 Pfam Reversibly glycosylated polypeptide 657 991 IPR037595 -
Cmo12g00085 998 SUPERFAMILY Cytochrome P450 118 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g00085 998 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 530 539 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00305 Cmo-Chr10:1363212 Cmo12g00085 Cmo-Chr12:453319 0 dispersed
Cmo12g00085 Cmo-Chr12:453319 Cmo18g00022 Cmo-Chr18:95193 0 dispersed
Cmo17g00473 Cmo-Chr17:3418249 Cmo12g00085 Cmo-Chr12:453319 2.97E-176 dispersed
Cmo20g01128 Cmo-Chr20:10922050 Cmo12g00085 Cmo-Chr12:453319 7.61E-155 dispersed
Cmo05g00479 Cmo-Chr5:2236593 Cmo12g00085 Cmo-Chr12:453319 0 transposed
Cmo13g01109 Cmo-Chr13:9082814 Cmo12g00085 Cmo-Chr12:453319 0 transposed
Cmo18g00685 Cmo-Chr18:8754063 Cmo12g00085 Cmo-Chr12:453319 0 transposed
Cmo12g00085 Cmo-Chr12:453319 Cmo05g00476 Cmo-Chr5:2219255 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00085 K20619 - csv:101221468 857.44