Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00144 | ATGTGGAACGATTGCCGCGGCGGTTTACCGGGCGCCGACCAGCCACAATTCGATCAAGAATCGTTTATTAACTTTGATTTCTTCTCGGCCACGACTAAACCTAAGGACTATTACAAGACGTTGGAGGTGGATTACGATGCAACTGATGATGATATTCGAGCCAATTACATACGACTTGCTCTGAAATGGCATCCTGACAAGCAGAAAGATCAGGATAATTCCACTTCAAGATTTCAGGAAATAAACGAGGCTTATCAAGTTTTGAGTGATCCCATCAAGAGGAGAGAATACGACATCAAAGACATGCTGTACAAATATGATTACAACGTAGTTGAATATCTCAACCGTTTCAAAGGGCTTATATTGACTTGCAATGGCCTTGGAATTAAGCATTCAATTTGGCCCAAAATTCTCTATGAGACAGCCACCGCGCATCTTTACCAAACGGCGAACGTTGAAAACGCAAATCTCTCTGTCTCCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCCGTCGCTTCAAGCTCGCCGGAGTTCAATAATGGCCGCCACCGTGCCGGACAATCTGTCTCGTGAGCAATATGTGTATCTAGCTAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGTCGCCGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTTGCTTACAAGAACGTGATTGGCTCACTTCGAGCTGCTTGGCGGATTGTTTCTTCCATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGAGGTCTGTGCTAGTATTTTGAAGCTTTTGGACTCGAATCTAATTCCATCGGCATGTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTATCATAGGTATATGGCGGAGTTTAAGGCTGGAGATGAGAGGAAAGCTGCTGCTGAGGATGCTATGCTGGCTTATAGGGATGCTCTGGATGTCGCAGTTGCGGATCTTGCACCCACTCATCCGATAAGGCTGGGTCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATCGCTGAGCTGGACACTTTGGGTGAAGAATCATACAAGGACAGCACCCTCATCATGCAGCTGTTGAGGGACAACCTCACGCTCTGGACTTCAGATGCGCAGGTCGTAACGGTTGTGAGTATTGACTTGTTTGCAGGACCAGTTAGACGAGTCGTAGAAGGCGGCATGAGCTCGACCTGTCCTGTGCTTGTGAATGGTGGGGGAGGAGGAGGTGGGCTTCAAATGTCATTTGCTTATGCTATTATAAATGTGTGA | 1449 | 46.72 | MWNDCRGGLPGADQPQFDQESFINFDFFSATTKPKDYYKTLEVDYDATDDDIRANYIRLALKWHPDKQKDQDNSTSRFQEINEAYQVLSDPIKRREYDIKDMLYKYDYNVVEYLNRFKGLILTCNGLGIKHSIWPKILYETATAHLYQTANVENANLSVSVSLSLSLSLSLSLSLYPSLQARRSSIMAATVPDNLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPVAELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSEVCASILKLLDSNLIPSACASESKVFYLKMKGDYHRYMAEFKAGDERKAAAEDAMLAYRDALDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQVVTVVSIDLFAGPVRRVVEGGMSSTCPVLVNGGGGGGGLQMSFAYAIINV | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 908622 | 917557 | - | CmoCh12G001440.1 | Cmo12g00144 | 392832 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00144 | 482 | ProSiteProfiles | dnaJ domain profile. | 36 | 101 | IPR001623 | - | |
Cmo12g00144 | 482 | PRINTS | DnaJ domain signature | 73 | 93 | IPR001623 | - | |
Cmo12g00144 | 482 | PRINTS | DnaJ domain signature | 56 | 71 | IPR001623 | - | |
Cmo12g00144 | 482 | PRINTS | DnaJ domain signature | 38 | 56 | IPR001623 | - | |
Cmo12g00144 | 482 | ProSitePatterns | Nt-dnaJ domain signature. | 78 | 97 | IPR018253 | - | |
Cmo12g00144 | 482 | Pfam | 14-3-3 protein | 203 | 428 | IPR023410 | - | |
Cmo12g00144 | 482 | SMART | dnaj_3 | 35 | 93 | IPR001623 | - | |
Cmo12g00144 | 482 | Coils | Coil | 203 | 223 | - | - | |
Cmo12g00144 | 482 | PANTHER | BNAC02G00320D PROTEIN | 194 | 443 | - | - | |
Cmo12g00144 | 482 | SUPERFAMILY | Chaperone J-domain | 32 | 120 | IPR036869 | - | |
Cmo12g00144 | 482 | ProSitePatterns | 14-3-3 proteins signature 1. | 238 | 248 | IPR023409 | - | |
Cmo12g00144 | 482 | ProSitePatterns | 14-3-3 proteins signature 2. | 410 | 429 | IPR023409 | - | |
Cmo12g00144 | 482 | SUPERFAMILY | 14-3-3 protein | 196 | 430 | IPR036815 | - | |
Cmo12g00144 | 482 | CDD | DnaJ | 36 | 90 | IPR001623 | - | |
Cmo12g00144 | 482 | Gene3D | DnaJ domain | 27 | 111 | IPR036869 | - | |
Cmo12g00144 | 482 | Pfam | DnaJ domain | 36 | 98 | IPR001623 | - | |
Cmo12g00144 | 482 | PRINTS | 14-3-3 protein zeta signature | 347 | 373 | IPR000308 | - | |
Cmo12g00144 | 482 | PRINTS | 14-3-3 protein zeta signature | 401 | 430 | IPR000308 | - | |
Cmo12g00144 | 482 | PRINTS | 14-3-3 protein zeta signature | 312 | 334 | IPR000308 | - | |
Cmo12g00144 | 482 | PRINTS | 14-3-3 protein zeta signature | 281 | 305 | IPR000308 | - | |
Cmo12g00144 | 482 | PRINTS | 14-3-3 protein zeta signature | 232 | 261 | IPR000308 | - | |
Cmo12g00144 | 482 | PRINTS | 14-3-3 protein zeta signature | 374 | 400 | IPR000308 | - | |
Cmo12g00144 | 482 | Gene3D | - | 178 | 437 | IPR036815 | - | |
Cmo12g00144 | 482 | SMART | 1433_4 | 197 | 441 | IPR023410 | - | |
Cmo12g00144 | 482 | PANTHER | 14-3-3 PROTEIN | 194 | 443 | IPR000308 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g01685 | Cmo12g00144 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo12g00144 | Cmo-Chr12:908622 | Cmo14g01165 | Cmo-Chr14:9444790 | 2.78E-129 | dispersed | |
Cmo19g00287 | Cmo-Chr19:2104998 | Cmo12g00144 | Cmo-Chr12:908622 | 3.31E-12 | dispersed | |
Cmo05g00585 | Cmo-Chr5:2895035 | Cmo12g00144 | Cmo-Chr12:908622 | 3.84E-165 | transposed | |
Cmo01g01685 | Cmo-Chr1:12699067 | Cmo12g00144 | Cmo-Chr12:908622 | 1.09E-56 | wgd | |
Cmo12g00144 | Cmo-Chr12:908622 | Cmo05g00584 | Cmo-Chr5:2890468 | 4.06E-82 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00144 | K06630 | - | csv:101222827 | 443.736 |