Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00153 | ATGGTTCATGCTGGTTCTACACAATTTTCGCATAAACTGGGGATTCAAAGCGTTCATGGATGCAATAAGTTACATATTAGTGGCAAGGGAAAGACCAGGCGACATCTTGTTACTATCATTCCTACATCACACGATCTGAGGTATGATCCTGGACGTCTTCAGCTCTTACGCAGTGCAAGTCAGCCAGTGTATCCCATGTCTTCCAGAGCAAATGTTTTGGTGTGTCGATCTGTTCTTGAATCAAGTGGTGGAGGAGCTGGGACTGCTGTTCTAAAAACTGCAGCTTTGGTGCTGACAAGATCTTATGATGCTTTACGCGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGCGTCATTGCTTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGGTTCTATTTCTTCATGAGCCCGATGGCAGTTGGAAGAAAAGTAATGCATACTATGTTACGACTTCCTACGTTCAGCCTTTACTGCTATGGATGGGAGCCACATTGATCTGCAGGGCTTTGGATCCAGTAGTTTTACCGTCAGTAGCCAGTCAGGCCATCAAACAGCGACTTCTAAATTTTGTTCGAGCTTTGTCTACTGTTCTGGCATTTGCCTATTGTATATCAAGCTTGATTCAACAAGTACAAAAATTCGCTACGGAATCAAATGACTCAAGTGATGCTAGAAATATGGGCTTTGATTTTGCGGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCTCTTTCATTGTTCATGGAGTTGCTAGGTTTTTCTACCCAAAAGTGGCTCACGGCTGGGGGTCTTGGTACTGTATTACTTACCCTTGCTGGTCGTGAGATATTTACTAACTTTCTCTCAAGTGTAATGATTCATGCAACACGACCATTTGTGGTAAATGAATGGATTCAGACAAAGATTGATGGATATGAAGTTTCTGGAACGGTTGAGCACGTTGGTTGGTGGTCGCCGACTATTATCCGAGGCGATGATCGTGAAGCAGTCCATATTCCAAATCACAAATTCACCGTTAGTATTGTGAGAAATCTTACTCAGAAGACTCATTGGCGTATCAAAACTCATCTTGCCATCAGCCACTTAGATGTCAACAAGATTAATTATATTGTAGCTGATATGCGGAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGTAGAATCTTCTTGGACAACATCAATCCTGAAAACCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAGTACTTGTGCGTAAAGGAGGCAATTCTCTTGGACCTTCTCAGGGTTATCAGCCACCATAGGGCCCGGCTTGCCACTCCCATACGCACTGTTCAGAAAATATATGGTGAGGCTGACTTGGAGAATGTACCATTTTCAGAGACCATGTATTCTCGTACAGGGGCTACTAACCGCCCTCTGCTTCTTATTGAGCCATCTTATAAAGTCAATGGTGACGATAAAGCCAAAGTCTCTGGACGTCCCGCTCGCTCGTCAAGCGAAGAAAAAGATGCCAAACAAGAGGCAGTCTCAACATCAGGAACGAAAGCCCCCGACACATCAGGAACAGCGCCTAAGCCTTCAACTGGACTGGTATCCAACACACAGACCCAGAATCCAACCAGTACTCCAGAACAAAGCAGCATTGAGAAGCCAGTAACAAGCAATGAGGTAAAAGGAGAAAAGAAAGAGCTCTCAGGATTGAACGCTAAGGATAATACGCCACGAGGGACTCCTCCCAAATGGTCGCCCTCAGCTGCCGGTCCGAGTAGCGAGAAAGCTGATATATCTTCCTCAAGCGTGCAGAATAAGCAAGATGGCGAGAAGACCCCTGTGGGCAGACCTCCATTGGAGGAGAACATTGTCCTGGGAGTTGCCTTGGAAGGCTCCAAAAGAACTCTTCCAATAGAGGAAGATCTGAATCCATCTCCCTTTCACTCTCCAGCTGATACAAAAGAAATTTCGACACAGAGGAATGGGAGTGAGTTTGGTCCAAAGAGCAAGGATATGAAAGATGGGCAGATGCCTGCAGTTCCAGGTGGTACAAAAAGTGATTGA | 2094 | 44.99 | MVHAGSTQFSHKLGIQSVHGCNKLHISGKGKTRRHLVTIIPTSHDLRYDPGRLQLLRSASQPVYPMSSRANVLVCRSVLESSGGGAGTAVLKTAALVLTRSYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRVLFLHEPDGSWKKSNAYYVTTSYVQPLLLWMGATLICRALDPVVLPSVASQAIKQRLLNFVRALSTVLAFAYCISSLIQQVQKFATESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNINPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFSETMYSRTGATNRPLLLIEPSYKVNGDDKAKVSGRPARSSSEEKDAKQEAVSTSGTKAPDTSGTAPKPSTGLVSNTQTQNPTSTPEQSSIEKPVTSNEVKGEKKELSGLNAKDNTPRGTPPKWSPSAAGPSSEKADISSSSVQNKQDGEKTPVGRPPLEENIVLGVALEGSKRTLPIEEDLNPSPFHSPADTKEISTQRNGSEFGPKSKDMKDGQMPAVPGGTKSD | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 995821 | 1001555 | - | CmoCh12G001530.1 | Cmo12g00153 | 392841 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00153 | 697 | MobiDBLite | consensus disorder prediction | 522 | 566 | - | - | |
Cmo12g00153 | 697 | SUPERFAMILY | Sm-like ribonucleoproteins | 283 | 353 | IPR010920 | - | |
Cmo12g00153 | 697 | Gene3D | - | 299 | 354 | IPR023408 | - | |
Cmo12g00153 | 697 | Gene3D | - | 193 | 297 | - | - | |
Cmo12g00153 | 697 | MobiDBLite | consensus disorder prediction | 497 | 521 | - | - | |
Cmo12g00153 | 697 | MobiDBLite | consensus disorder prediction | 497 | 697 | - | - | |
Cmo12g00153 | 697 | MobiDBLite | consensus disorder prediction | 660 | 675 | - | - | |
Cmo12g00153 | 697 | MobiDBLite | consensus disorder prediction | 602 | 619 | - | - | |
Cmo12g00153 | 697 | Pfam | Mechanosensitive ion channel | 240 | 447 | IPR006685 | GO:0016020|GO:0055085 | |
Cmo12g00153 | 697 | MobiDBLite | consensus disorder prediction | 567 | 581 | - | - | |
Cmo12g00153 | 697 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 1 | 689 | - | - | |
Cmo12g00153 | 697 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 689 | IPR045042 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo12g00153 | Cmo-Chr12:995821 | Cmo16g00807 | Cmo-Chr16:4154484 | 0 | dispersed | |
Cmo12g00153 | Cmo-Chr12:995821 | Cmo05g00572 | Cmo-Chr5:2804121 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00153 | K22047 | - | csv:101213477 | 1172.53 |