Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00250 ATGACGGCACCGGTGTCGATTGATGGGAAGGGGAAGGGAAGTATTGAGAATTTGGTGTCTGCTACTAGGTCGTTGAAGGCTAGTTTAGAGAAATCTAGGGATTTAGGGTTTGCGTTGCAGAAAGCTGGGTCGAGATTGGAGGATATTAGCCAAAGATTGCCGACTTTAGAAGCAGCTGTTCGGCCTATTCGTGCTGATAAGGAAGCTCTGGTCGCCGTCGGTGGCCATATAAATCGAGCTGTTGGCCCAGCGGCGGCGGTGCTTAAGGTTTTTGATGCGGTTCATGGCCTTGAAAAGTCTCTGTTATCGGACCCGAGGAATGATCTGCCTGGTTATTTGTCGGTGTTGAAACGTATGGAAGAGGCATTGAGGTTCTTGGGAGATAACTGTGGACTTGCAATCCAGTGGTTGGAGGACATAGTTGAGTATTTGGAAGATAACAATGTTGCTGATGAGAGATACCTTGCGAATTTGAAGAAATCTTTGAAAATTTTGAGGGATTTGCAGAGTGATGAGGATAGAATTCGGCTTGATGGGGGGCTTTTGAATGCTGCTTTAGATAAACTAGAGAACGAGTTTAGGCGTCTTTTAACGGAGCACAGTGTGCCCCTTCCTATGTCGTCTTCCCCGTCGCTCGGTGAGCAGGCGTGCATTGCTCCATCTCCATTGCCTGTGACTGTTATTCAAAAATTGCAGGCTATTCTTGGGAGATTGATTGCTAATAAACGACTTGATAGATGCATATCCATTTACGTCGAAGTTCGTAGTTCTAACGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATATCGGTTTCCGAGTTCAACGATGTGCAGAGCATTGAAGGGTACATCGCAAAATGGGGAAAGCATTTGGAGTTTGCTGTGAAACACTTGTTTGAAGCTGAGTTCAAGCTTTGTAATGATGTTTTTGAGAGGATTGGATTGGATGTTTGGATGGGCTGCTTTGCAAAGATAGTAACTCAAGCTGGTATTCTTGCATTTCTTCAATTTGGGAAGACTGTAACAGAGAGCAAGAACGATCCTATTAAGCTATTGAAGTTGTTAGATATCTTTGCATCCTTGAACAAACTGAGACTCGACTTTAATCGGCTCTTTGGCGGGGCTGCGTGTTTGGAAATTCAAAACCTGACTCGGGATCTCATTAAGCGGGTTATCGATGGCGTGGCCGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGTTACAGAGGCAAAACTCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAGCTTCATTATCGATTACAGTAATAAACTGCTCAGCGACGATTATCGGCCAATCCTGACCCAAGCTCTCGTCATTCACCGAAGTTGGAAGAAGGAAAAGTTCCAAGAGGGTCTTCTTATCGGTGAGGTTACGAATCTTGTTAGAGCCATCGAGCAGAATCTGGACGCTTGGATAAAGGCTTATGAAGATTCTACCTTGTCGAACTTTTTCGCCATGAACAACCATTGGCATCTACATAAGCACCTCAAAGGAACGAAAGTTGGAGAGCTAATGGGAGAGAAAGTAAAGGAACATGAACAGTATAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGCCATTTAAGCAGGGAGGGCTTGATCATGTTCTCGGGTGGGCGCGCTACTGCCCGTGATCTCGTCAAGAAACGTCTTAAGACGTTCAATGAAGCTTTTGAAGACATGTATAAGAAGCAATCAGTCTGGGTTATAACTGACAAAGAATTGAGGGAGAAGACATGCCAGCTTATAGTTCAAACGATCGTGCCTGTTTATCGCAGCTACATGCAGAATTATGGTCCTCTAGTCGAGCAAGACCCGAGTTCGAGTAAGTATGCGAAGTACACCGTGCAGAATCTGGAGAAAATGTTACTGTCCCTTTATCAGCCAAAGCCACTTAGGTTCAGCAGCCTTAAAGTTAGGCAGACTAGTGGGAAATTCAGCAATGGCGCAGCCGATCATCGTCGTTCCAACTCCATGGTTATGTAA 2049 45.0 MTAPVSIDGKGKGSIENLVSATRSLKASLEKSRDLGFALQKAGSRLEDISQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNNVADERYLANLKKSLKILRDLQSDEDRIRLDGGLLNAALDKLENEFRRLLTEHSVPLPMSSSPSLGEQACIAPSPLPVTVIQKLQAILGRLIANKRLDRCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIVTQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGVAEIFWELLVQVELQRQNSPPLDGAVPRLVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLIGEVTNLVRAIEQNLDAWIKAYEDSTLSNFFAMNNHWHLHKHLKGTKVGELMGEKVKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSVWVITDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDPSSSKYAKYTVQNLEKMLLSLYQPKPLRFSSLKVRQTSGKFSNGAADHRRSNSMVM 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1623698 1625746 - CmoCh12G002500.1 Cmo12g00250 392938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00250 682 Gene3D Exocyst complex component Exo70 137 654 - -
Cmo12g00250 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 671 IPR004140 GO:0000145|GO:0006887
Cmo12g00250 682 SUPERFAMILY Cullin repeat-like 87 648 IPR016159 -
Cmo12g00250 682 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 14 671 - -
Cmo12g00250 682 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00427 Cmo12g00250 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00136 Cmo-Chr5:597060 Cmo12g00250 Cmo-Chr12:1623698 8.33E-69 dispersed
Cmo12g00250 Cmo-Chr12:1623698 Cmo17g00621 Cmo-Chr17:6530930 0 dispersed
Cmo12g00250 Cmo-Chr12:1623698 Cmo05g00650 Cmo-Chr5:3281102 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00250 K07195 - csv:101207478 1251.11