Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00345 | ATGTCTCTCTTCTTCACCTTTCTTCTCCTCTTTTCTTCCCTCTTTCCGTCTCTCGATGCCTTGACCTACCGCTATTACGACCACACATGCCCTAATCTCGAGTCCATCGTCGCCCGAGAAGTCCACCTAGCCACCGTCAACGATAAGACGGTTCCTGCCGCACTTCTCCGAATGCACTTCCACGACTGTTTCATTAGAGGTTGTGATGGGTCTGTGCTTCTCGACTCAAAGGGGAAGAACAAGGCGGAAAAAGACGGCCCTCCTAATATATCGTTACATGCTTTTTATGTCATTGATAAGGCTAAGAAGGCTATTGAATCTGCTTGCCCTGGTGTTGTTTCTTGTGCTGATATCCTAGCTCTCGCTGCTCGAGATGCTGTTGTTGTGTCGGGAGGTCCTCATTGGGAAGTCCCGAAAGGAAGAAAAGACGGAAGAATCTCGAAAGCAAATGAAACCATACAATTGCCTTTTCCGACATTCAACTTCTCCCAACTCCAACAAAGCTTCTCTCAACGAGGGCTTTCCATACAAGATCTTGTAGCTCTATCAGGTGGACACACGTTAGGATTCGCTCATTGCTCGTCATTCCAAAACCGAATCCACAAATTCAACTCGACCGTCGACATCGACCCGTTGTTGCAACCATCGTTCGCGGCCAGTCTCCGGAGCATATGTCCAGCTCACAACAAGGTGAAGAACGCCGGGTCCGCCATGGATTCAACTACCACGGTGTTTGACAATGCATACTTCAAGCTGCTTCTTCAAGGGCGGAGCATTTTTTCTTCCGATCAATCTTTGCTTTCAACGCCGTATTCAAAGGCTTTGGTGTCTAAATTCGCCAATGAACAACGCCACTTTGAGAAGGCGTTTGTGAAGTCCATGGTCAAGATGAGTCGGATCGCCGGCGCCGGCGAAGAAGTCCGGCTAAACTGCCGGGTGGTCAGATAA | 948 | 48.95 | MSLFFTFLLLFSSLFPSLDALTYRYYDHTCPNLESIVAREVHLATVNDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDKAKKAIESACPGVVSCADILALAARDAVVVSGGPHWEVPKGRKDGRISKANETIQLPFPTFNFSQLQQSFSQRGLSIQDLVALSGGHTLGFAHCSSFQNRIHKFNSTVDIDPLLQPSFAASLRSICPAHNKVKNAGSAMDSTTTVFDNAYFKLLLQGRSIFSSDQSLLSTPYSKALVSKFANEQRHFEKAFVKSMVKMSRIAGAGEEVRLNCRVVR | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2143584 | 2144951 | - | CmoCh12G003450.1 | Cmo12g00345 | 393033 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00345 | 315 | SUPERFAMILY | Heme-dependent peroxidases | 21 | 314 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | Pfam | Peroxidase | 41 | 281 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 178 | 188 | IPR019793 | - | |
Cmo12g00345 | 315 | Gene3D | Peroxidase, domain 2 | 156 | 297 | - | - | |
Cmo12g00345 | 315 | ProSiteProfiles | Plant heme peroxidase family profile. | 20 | 315 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | Gene3D | - | 24 | 314 | - | - | |
Cmo12g00345 | 315 | PANTHER | PEROXIDASE 25-RELATED | 6 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | CDD | secretory_peroxidase | 21 | 314 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo12g00345 | 315 | PRINTS | Haem peroxidase superfamily signature | 52 | 66 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Haem peroxidase superfamily signature | 113 | 130 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Haem peroxidase superfamily signature | 131 | 143 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Haem peroxidase superfamily signature | 178 | 193 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Haem peroxidase superfamily signature | 238 | 253 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 30 | 49 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 54 | 74 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 93 | 106 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 112 | 122 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 131 | 146 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 177 | 189 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 236 | 251 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 252 | 269 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PRINTS | Plant peroxidase signature | 292 | 305 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo12g00345 | 315 | PANTHER | PEROXIDASE 64 | 6 | 314 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00403 | Cmo-Chr7:1852197 | Cmo12g00345 | Cmo-Chr12:2143584 | 8.59E-150 | dispersed | |
Cmo12g00345 | Cmo-Chr12:2143584 | Cmo03g01001 | Cmo-Chr3:7539228 | 9.65E-83 | dispersed | |
Cmo18g01236 | Cmo-Chr18:12206483 | Cmo12g00345 | Cmo-Chr12:2143584 | 4.13E-124 | transposed | |
Cmo12g00345 | Cmo-Chr12:2143584 | Cmo03g00688 | Cmo-Chr3:6034619 | 3.63E-153 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00345 | K00430 | - | csv:101214403 | 530.02 |