Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00345 ATGTCTCTCTTCTTCACCTTTCTTCTCCTCTTTTCTTCCCTCTTTCCGTCTCTCGATGCCTTGACCTACCGCTATTACGACCACACATGCCCTAATCTCGAGTCCATCGTCGCCCGAGAAGTCCACCTAGCCACCGTCAACGATAAGACGGTTCCTGCCGCACTTCTCCGAATGCACTTCCACGACTGTTTCATTAGAGGTTGTGATGGGTCTGTGCTTCTCGACTCAAAGGGGAAGAACAAGGCGGAAAAAGACGGCCCTCCTAATATATCGTTACATGCTTTTTATGTCATTGATAAGGCTAAGAAGGCTATTGAATCTGCTTGCCCTGGTGTTGTTTCTTGTGCTGATATCCTAGCTCTCGCTGCTCGAGATGCTGTTGTTGTGTCGGGAGGTCCTCATTGGGAAGTCCCGAAAGGAAGAAAAGACGGAAGAATCTCGAAAGCAAATGAAACCATACAATTGCCTTTTCCGACATTCAACTTCTCCCAACTCCAACAAAGCTTCTCTCAACGAGGGCTTTCCATACAAGATCTTGTAGCTCTATCAGGTGGACACACGTTAGGATTCGCTCATTGCTCGTCATTCCAAAACCGAATCCACAAATTCAACTCGACCGTCGACATCGACCCGTTGTTGCAACCATCGTTCGCGGCCAGTCTCCGGAGCATATGTCCAGCTCACAACAAGGTGAAGAACGCCGGGTCCGCCATGGATTCAACTACCACGGTGTTTGACAATGCATACTTCAAGCTGCTTCTTCAAGGGCGGAGCATTTTTTCTTCCGATCAATCTTTGCTTTCAACGCCGTATTCAAAGGCTTTGGTGTCTAAATTCGCCAATGAACAACGCCACTTTGAGAAGGCGTTTGTGAAGTCCATGGTCAAGATGAGTCGGATCGCCGGCGCCGGCGAAGAAGTCCGGCTAAACTGCCGGGTGGTCAGATAA 948 48.95 MSLFFTFLLLFSSLFPSLDALTYRYYDHTCPNLESIVAREVHLATVNDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDKAKKAIESACPGVVSCADILALAARDAVVVSGGPHWEVPKGRKDGRISKANETIQLPFPTFNFSQLQQSFSQRGLSIQDLVALSGGHTLGFAHCSSFQNRIHKFNSTVDIDPLLQPSFAASLRSICPAHNKVKNAGSAMDSTTTVFDNAYFKLLLQGRSIFSSDQSLLSTPYSKALVSKFANEQRHFEKAFVKSMVKMSRIAGAGEEVRLNCRVVR 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2143584 2144951 - CmoCh12G003450.1 Cmo12g00345 393033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00345 315 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Cmo12g00345 315 Gene3D Peroxidase, domain 2 156 297 - -
Cmo12g00345 315 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 Gene3D - 24 314 - -
Cmo12g00345 315 PANTHER PEROXIDASE 25-RELATED 6 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Cmo12g00345 315 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo12g00345 315 PANTHER PEROXIDASE 64 6 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00403 Cmo-Chr7:1852197 Cmo12g00345 Cmo-Chr12:2143584 8.59E-150 dispersed
Cmo12g00345 Cmo-Chr12:2143584 Cmo03g01001 Cmo-Chr3:7539228 9.65E-83 dispersed
Cmo18g01236 Cmo-Chr18:12206483 Cmo12g00345 Cmo-Chr12:2143584 4.13E-124 transposed
Cmo12g00345 Cmo-Chr12:2143584 Cmo03g00688 Cmo-Chr3:6034619 3.63E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00345 K00430 - csv:101214403 530.02