Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00386 | ATGGCGGACATCGGCTCGGTCTCGAACAAGAGAATGTCGTGTTCGATCCCCGAGAGGTTCCAGCTCCACGCCGCCATGTTAGCCTTGCAATTCGGCTACGCTGGCTTCCATGTCGTCTCTAGAGCTGCCCTCAATATGGGCATTAGTAAACTCGTCTTCCCTGTCTATCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTTGCATATTTCATGGAAAAGAAGGATAGGCCTGCGCTTACTCTCAACTTTGTTCTTCAGTTCTTCCTCCTCGCTCTCGTTGGAATTACTGCAAATCAAGGGTTTTACTTGTTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAGAATTCTGTCCCTGCTATTACTTTCCTCATGGCTGTACTTCTCCGGATAGAACAAGTTCGACTAAACCGGAAAGATGGGATAGCGAAGGTGGTAGGCACTCTATGCTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGCCCCACCGTCTACAGCCCGGCAACGACAGTGACGGTGCACAGCACGGCGGAGACGGCGGGGATGCTGATGGGGCCGGGAATGTTCCCGTCACTAGGCGACGCAAAGGGCAAAAGCTGGACGTTAGGGTGCATGTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTGGTTCTACAAGCTCCGGTGCTGAAAAAGTACCCGGCTCGACTCTCCGTCACGTCATTCACTTGCTTTTTTGGCCTCATCCAATTCTTCATCATCGCTGCCGCGTTCGAGCGCGATGCTCAGGCTTGGCTCTTCCATTCCGACGCCGAAGCCTTCAGCATTGTTTATGCGGGGGTGGTGGCTTCCGGGATAGCGTTCGCCGTACAGATATGGTGTATTGACAGAGGTGGTCCGGTCTTTGTGGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCGCTCATGGCTTCCTTCGCTTTGGGTGAAGAGTTTTACTTGGGAGGGATCATAGGGGCGGTGCTGATTATATCGGGACTATACCTTGTGCTGTGGGGCAAGAGCGAAGAGAGGAAGCTCTTATTGGAATGGGCAGTAATCCAGTCTACTCCGGACCATGTTACCAGCAGAACAAGCGGCCACATCAAGCCGTCTCTTAACCAGCCACTCCTGCATCCTACGGCTGAAAATGTTTGA | 1182 | 52.79 | MADIGSVSNKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFMEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVLLRIEQVRLNRKDGIAKVVGTLCCVAGATVITLYKGPTVYSPATTVTVHSTAETAGMLMGPGMFPSLGDAKGKSWTLGCMYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFFIIAAAFERDAQAWLFHSDAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEERKLLLEWAVIQSTPDHVTSRTSGHIKPSLNQPLLHPTAENV | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2398747 | 2402336 | + | CmoCh12G003860.1 | Cmo12g00386 | 393074 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00386 | 393 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 56 | 166 | - | - | |
Cmo12g00386 | 393 | PANTHER | WAT1-RELATED PROTEIN | 14 | 370 | IPR030184 | GO:0016021|GO:0022857 | |
Cmo12g00386 | 393 | Pfam | EamA-like transporter family | 26 | 163 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo12g00386 | 393 | Pfam | EamA-like transporter family | 208 | 346 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo12g00386 | 393 | PANTHER | WAT1-RELATED PROTEIN | 14 | 370 | - | - | |
Cmo12g00386 | 393 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 253 | 351 | - | - | |
Cmo12g00386 | 393 | MobiDBLite | consensus disorder prediction | 371 | 393 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo09g00123 | Cmo12g00386 | CCT | |
Cmo09g00123 | Cmo12g00386 | ECH | |
Cmo05g00280 | Cmo12g00386 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00300 | Cmo-Chr11:1446008 | Cmo12g00386 | Cmo-Chr12:2398747 | 1.45E-137 | dispersed | |
Cmo12g00386 | Cmo-Chr12:2398747 | Cmo15g01403 | Cmo-Chr15:9545809 | 9.63E-84 | dispersed | |
Cmo09g00757 | Cmo-Chr9:3831540 | Cmo12g00386 | Cmo-Chr12:2398747 | 1.13E-77 | transposed | |
Cmo12g00386 | Cmo-Chr12:2398747 | Cmo05g00280 | Cmo-Chr5:1203071 | 0 | wgd | |
Cmo12g00386 | Cmo-Chr12:2398747 | Cmo09g00123 | Cmo-Chr9:572730 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00386 | - | - | csv:101210562 | 706.442 |