Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00435 ATGTCTCACGAACACTATGTGGGTGTGATTAGAAAGTCTCTACATAGAGTCGTGAACTTGTCAAAGCAGAGCAGGAAATCACATAGAGTCGGCCGATACAAGGGTCGCTCCCTTTGGTCACTTTCGCGTTATGAAACTATTAGGGGTAGATCGACTAACCTATTAATTAGATCAACCCGAGTTGCGACGCCAGTTACTCCTAATTTCCTCGTTACCCCCACCCCTCACGCAATCCTCGCTTCAGATCGCCGGGAAATGACCTCCGACGGGGCTACTTCTGCCTCCACTTGCCGGCGGAAGCCGTCATGGAGGGAGCGGGAAAATAATCGAACCAGAGAGCGGCGGAGGAGAGCTATTGCGGCCAAGATTTATGCCGGCCTTAGGGCTCAAGGCAACTTCAACTTGCCTAAACATTGTGACAATAACGAGGTCCTTAAAGCCCTCTGTGCTGATGCTGGTTGGACTGTCGAAGATGATGGGACCACTTATCGGAAGGGATGCAAGCCACCTCCAATGAACATTGTTGGTACTTCCACTAGAATCACGCCCTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCTAGCCCTATGGCATCCTACCAAGTCAGCCCCTCCTCCTCCTCCTTTCCGAGCCCGTCCCGTCTGGACGCCGACAATCCATCGAACCTCATTCCGTATCTTCGTCAAGCAATTCCCAGATCACTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCAAGAACTCCACAGCCATTCCTCAATTGGGAGGTCACTGCAAAGGAATCCTTCTCCTCCTTGAACTACCCTTTCTTTGCAGTATCTGCCCCTGCTAGCCCAACTCGCCCTCAGCTGCATACTCCCACCACGATCCACGAATGTGATGAGTCTGAATCATCCACCAACGCTTCCAATCAATGGGCATTTCTCCATGCCTATCCCCAATCCACATTGACAATGCCAACGTCTCCCACATTCAACCTTGTGAAGCCTGCTGACCAGCATGATCTGCAGGGAGGCTTCATCAAGGAAAATGGAAGAGGAAGTGAATTCGAGTTCTTGGGCCGTAAGGTTAAGCCTTGGGAAGGGGAGAAGATCCATGAAGTCAGATTGGAGGATTTGGAACTCACACTTGGTAGTAGCAGTAAGGCTTGA 1188 50.84 MSHEHYVGVIRKSLHRVVNLSKQSRKSHRVGRYKGRSLWSLSRYETIRGRSTNLLIRSTRVATPVTPNFLVTPTPHAILASDRREMTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCKPPPMNIVGTSTRITPYSSQNPSPLSSSFPSPMASYQVSPSSSSFPSPSRLDADNPSNLIPYLRQAIPRSLPPLRISNSAPVTPPLSSPASRTPQPFLNWEVTAKESFSSLNYPFFAVSAPASPTRPQLHTPTTIHECDESESSTNASNQWAFLHAYPQSTLTMPTSPTFNLVKPADQHDLQGGFIKENGRGSEFEFLGRKVKPWEGEKIHEVRLEDLELTLGSSSKA 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2676074 2678979 - CmoCh12G004350.1 Cmo12g00435 393123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00435 395 MobiDBLite consensus disorder prediction 99 113 - -
Cmo12g00435 395 MobiDBLite consensus disorder prediction 85 113 - -
Cmo12g00435 395 MobiDBLite consensus disorder prediction 180 220 - -
Cmo12g00435 395 Pfam BES1/BZR1 plant transcription factor, N-terminal 98 222 IPR008540 -
Cmo12g00435 395 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 86 393 - -
Cmo12g00435 395 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 86 393 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00234 Cmo12g00435 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00435 Cmo-Chr12:2676074 Cmo13g00609 Cmo-Chr13:6674594 5.32E-40 dispersed
Cmo12g00435 Cmo-Chr12:2676074 Cmo03g00806 Cmo-Chr3:6530547 3.22E-85 wgd
Cmo12g00435 Cmo-Chr12:2676074 Cmo05g00234 Cmo-Chr5:1002966 1.13E-158 wgd
Cmo12g00435 Cmo-Chr12:2676074 Cmo07g00506 Cmo-Chr7:2298841 8.72E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10725 PF05687 BES1_N 6.30E-62 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00435 K14503 - csv:101219853 486.878