Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00526 ATGCATAATTCAAACACATCCAAGAAGATGAAGCTGCAATGGTTCCTTCTGTTCTTGATTTCATTTGCAGAAGCACAGAGGGAGACTTACATAATTCACATGGATCGAACCGACATGCCACGAGCCTTCGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAGTCGGTTTCTGATTCAGCTCAAATGCTTTATTCCTACAATACAGTGGTTCATGGTTTCTCCACGAGATTGACTGTGGAAGAAGCTAAGTTAATAGAAAAGCAGGAAGGGATTCTTGCTGTTATACCTGAAGTGAAGTATGAGCTCCATACGACTCGGACGCCGGAGTTTCTTGGACTTGGGAAGAGTGTTTCGTTCTTCCCTGCATCGGAGAAGGTTGGCGAAGTGATTATCGGAGTTCTCGACACTGGTGTATGGCCTGAATTGGAGAGCTTCAATGATGCAGGGCTTGGACCAGTGCCTCCGAGCTGGAAAGGGGAGTGTGAAGTGGGTAAGAACTTTAACTCGTCTAATTGTAACAGGAAATTGATTGGAGCTAGATACTTTTCGAGGGGCTACGAGGCAGCATTTGGGGCGATTGATGAATCCCAGGAGTCGAAATCACCGAGGGACGACGATGGTCATGGAACTCATACTTCAACGACTGCTGCTGGATCCCCTGCAACCGGAGCTAGCCTCTTTGGGTTTGCTGCAGGGACTGCAAGAGGAATGGCAGCAGAAGCTCGGGTTGCAACGTATAAGGTATGCTGGCTTGGAGGGTGTTTCGGTTCTGATATTTTAGCTGCAATCGACAAGGCTGTTGAAGATGGTGTCGATGTTTTGTCTTTGTCGCTTGGTGGATCATCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCGGCTCAGGGAGTTTTTGTGTCATGTTCTGCTGGGAATAGCGGCCCGTCATCTGGTAGCTTGTCGAACGTTGCGCCATGGATAACCACAGTTGGCGCTGGGACTCTCGACAGAGACTTCCCGACATACGTTACTCTTGGAAATGGGAAGAAATTCATCGGGGAGTCGCTGTACAGTGGAAAGCCCTTGTCGGACTCTTTAATACCAATTGTATATGCATCCGAAGCGAGTAATTCATCTAGTGGTAGCCTTTGCTTGACCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTCTGTGACAGAGGAGGGAACTCCCGCATCCAGAAAGGGGTGGTGGTGAAAGACGCCGGTGGCGTCGGAATGATTCTAGCCAACACTGACACATACGGAGAGGAACAATTAGCCGATGCACATCTCCTGCCAACGGCGGCCGTTGGCCAAAAAGCCGGCGACGCAATAAAGAACTACATCTCCTCCAACGCGAATCCAACAGCAACGATCAGTAGCAGCACCACGAGATTGGGAGTTAAACCGTCGCCGGTGGTGGCCGCATTCAGTTCTCGAGGCCCTAATTTCCTCACTCCACAGATTCTCAAACCCGATCTAATAGCACCTGGAGTGAACATTCTAGCCGGATGGATCGGTGGCGCCACTCCGGCCGGTTCAGACAGCGACAAGCCGCACGTGCCCTTCAACATAATCTCCGGCACATCAATGTCTTGCCCTCACATCAGTGGATTAGCTGCACTTCTGAAAGCTGCTCATCCAGATTGGAGCCCAGACGCTATTAGATCTGCCTTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCAATTCAAGACGTATCCAAGGGATTACCGTCGACGCCGTTCGGTATAGGAGCCGGACACGTGAATCCAATGGCTGCTCTCGATCCCGGCCTTGTTTACGACACCACCACCAATGACTACTTCGCCTTCCTTTGCGCCCTAAACTACACCTCACTTGCAATCAAAGTAATCACCAAGAAGGACTTCACCTGCAGTGGGAACAAGTACAGATTGGAGGATCTGAACTACCCATCTTTTGCAGTTCCATTGGAGACCCCTTCCATCAGAGGAGACGAAAACGCTGCACCGACCACCATAAAATACATAAGAACACTGACCAACAAAGGCACCCCATCGACGTACAAGGCCTCTGTGACGTTGAAAAGTCCGTCAGTGAAGATTGTCATTGAGCCACAAACTCTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACTTTCATTGCTTCTCCAATGCCGTCGGGGACCGAGAGCTTTTCTCGTCTGGAATGGTCAGACGGGAAACACATAGTGGGTAGCCCCATTGCTTTCACCTGGACATAG 2289 49.5 MHNSNTSKKMKLQWFLLFLISFAEAQRETYIIHMDRTDMPRAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDAGLGPVPPSWKGECEVGKNFNSSNCNRKLIGARYFSRGYEAAFGAIDESQESKSPRDDDGHGTHTSTTAAGSPATGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGSDILAAIDKAVEDGVDVLSLSLGGSSPDYYRDNVAIGAFSAAAQGVFVSCSAGNSGPSSGSLSNVAPWITTVGAGTLDRDFPTYVTLGNGKKFIGESLYSGKPLSDSLIPIVYASEASNSSSGSLCLTSTLNPAKVAGKIVVCDRGGNSRIQKGVVVKDAGGVGMILANTDTYGEEQLADAHLLPTAAVGQKAGDAIKNYISSNANPTATISSSTTRLGVKPSPVVAAFSSRGPNFLTPQILKPDLIAPGVNILAGWIGGATPAGSDSDKPHVPFNIISGTSMSCPHISGLAALLKAAHPDWSPDAIRSALMTTAYSTYKNGEAIQDVSKGLPSTPFGIGAGHVNPMAALDPGLVYDTTTNDYFAFLCALNYTSLAIKVITKKDFTCSGNKYRLEDLNYPSFAVPLETPSIRGDENAAPTTIKYIRTLTNKGTPSTYKASVTLKSPSVKIVIEPQTLSFAEANEQKSYTVTFIASPMPSGTESFSRLEWSDGKHIVGSPIAFTWT 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3224994 3227282 - CmoCh12G005260.1 Cmo12g00526 393214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00526 762 SUPERFAMILY PA domain 388 470 IPR046450 -
Cmo12g00526 762 Pfam Peptidase inhibitor I9 29 104 IPR010259 -
Cmo12g00526 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 760 IPR045051 -
Cmo12g00526 762 CDD Peptidases_S8_3 101 573 IPR034197 -
Cmo12g00526 762 Pfam PA domain 379 454 IPR003137 -
Cmo12g00526 762 Gene3D Peptidase S8/S53 domain 130 620 IPR036852 GO:0004252|GO:0006508
Cmo12g00526 762 Pfam Fibronectin type-III domain 653 758 IPR041469 -
Cmo12g00526 762 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 19 760 - -
Cmo12g00526 762 MobiDBLite consensus disorder prediction 194 220 - -
Cmo12g00526 762 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Cmo12g00526 762 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Cmo12g00526 762 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Cmo12g00526 762 Pfam Subtilase family 130 583 IPR000209 GO:0006508|GO:0008236
Cmo12g00526 762 CDD PA_subtilisin_like 341 468 - -
Cmo12g00526 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 104 IPR037045 -
Cmo12g00526 762 ProSiteProfiles Serine proteases, subtilase domain profile. 100 607 - -
Cmo12g00526 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Cmo12g00526 762 SUPERFAMILY Subtilisin-like 103 611 IPR036852 GO:0004252|GO:0006508
Cmo12g00526 762 Gene3D - 335 475 - -
Cmo12g00526 762 Gene3D - 624 761 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00151 Cmo12g00526 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00775 Cmo-Chr8:4887730 Cmo12g00526 Cmo-Chr12:3224994 0 dispersed
Cmo12g00526 Cmo-Chr12:3224994 Cmo16g00173 Cmo-Chr16:786400 0 dispersed
Cmo12g00526 Cmo-Chr12:3224994 Cmo03g00970 Cmo-Chr3:7281657 0 wgd
Cmo12g00526 Cmo-Chr12:3224994 Cmo05g00151 Cmo-Chr5:663324 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00526 - - csv:101207099 1241.1