Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00526 | ATGCATAATTCAAACACATCCAAGAAGATGAAGCTGCAATGGTTCCTTCTGTTCTTGATTTCATTTGCAGAAGCACAGAGGGAGACTTACATAATTCACATGGATCGAACCGACATGCCACGAGCCTTCGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAGTCGGTTTCTGATTCAGCTCAAATGCTTTATTCCTACAATACAGTGGTTCATGGTTTCTCCACGAGATTGACTGTGGAAGAAGCTAAGTTAATAGAAAAGCAGGAAGGGATTCTTGCTGTTATACCTGAAGTGAAGTATGAGCTCCATACGACTCGGACGCCGGAGTTTCTTGGACTTGGGAAGAGTGTTTCGTTCTTCCCTGCATCGGAGAAGGTTGGCGAAGTGATTATCGGAGTTCTCGACACTGGTGTATGGCCTGAATTGGAGAGCTTCAATGATGCAGGGCTTGGACCAGTGCCTCCGAGCTGGAAAGGGGAGTGTGAAGTGGGTAAGAACTTTAACTCGTCTAATTGTAACAGGAAATTGATTGGAGCTAGATACTTTTCGAGGGGCTACGAGGCAGCATTTGGGGCGATTGATGAATCCCAGGAGTCGAAATCACCGAGGGACGACGATGGTCATGGAACTCATACTTCAACGACTGCTGCTGGATCCCCTGCAACCGGAGCTAGCCTCTTTGGGTTTGCTGCAGGGACTGCAAGAGGAATGGCAGCAGAAGCTCGGGTTGCAACGTATAAGGTATGCTGGCTTGGAGGGTGTTTCGGTTCTGATATTTTAGCTGCAATCGACAAGGCTGTTGAAGATGGTGTCGATGTTTTGTCTTTGTCGCTTGGTGGATCATCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCGGCTCAGGGAGTTTTTGTGTCATGTTCTGCTGGGAATAGCGGCCCGTCATCTGGTAGCTTGTCGAACGTTGCGCCATGGATAACCACAGTTGGCGCTGGGACTCTCGACAGAGACTTCCCGACATACGTTACTCTTGGAAATGGGAAGAAATTCATCGGGGAGTCGCTGTACAGTGGAAAGCCCTTGTCGGACTCTTTAATACCAATTGTATATGCATCCGAAGCGAGTAATTCATCTAGTGGTAGCCTTTGCTTGACCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTCTGTGACAGAGGAGGGAACTCCCGCATCCAGAAAGGGGTGGTGGTGAAAGACGCCGGTGGCGTCGGAATGATTCTAGCCAACACTGACACATACGGAGAGGAACAATTAGCCGATGCACATCTCCTGCCAACGGCGGCCGTTGGCCAAAAAGCCGGCGACGCAATAAAGAACTACATCTCCTCCAACGCGAATCCAACAGCAACGATCAGTAGCAGCACCACGAGATTGGGAGTTAAACCGTCGCCGGTGGTGGCCGCATTCAGTTCTCGAGGCCCTAATTTCCTCACTCCACAGATTCTCAAACCCGATCTAATAGCACCTGGAGTGAACATTCTAGCCGGATGGATCGGTGGCGCCACTCCGGCCGGTTCAGACAGCGACAAGCCGCACGTGCCCTTCAACATAATCTCCGGCACATCAATGTCTTGCCCTCACATCAGTGGATTAGCTGCACTTCTGAAAGCTGCTCATCCAGATTGGAGCCCAGACGCTATTAGATCTGCCTTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCAATTCAAGACGTATCCAAGGGATTACCGTCGACGCCGTTCGGTATAGGAGCCGGACACGTGAATCCAATGGCTGCTCTCGATCCCGGCCTTGTTTACGACACCACCACCAATGACTACTTCGCCTTCCTTTGCGCCCTAAACTACACCTCACTTGCAATCAAAGTAATCACCAAGAAGGACTTCACCTGCAGTGGGAACAAGTACAGATTGGAGGATCTGAACTACCCATCTTTTGCAGTTCCATTGGAGACCCCTTCCATCAGAGGAGACGAAAACGCTGCACCGACCACCATAAAATACATAAGAACACTGACCAACAAAGGCACCCCATCGACGTACAAGGCCTCTGTGACGTTGAAAAGTCCGTCAGTGAAGATTGTCATTGAGCCACAAACTCTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACTTTCATTGCTTCTCCAATGCCGTCGGGGACCGAGAGCTTTTCTCGTCTGGAATGGTCAGACGGGAAACACATAGTGGGTAGCCCCATTGCTTTCACCTGGACATAG | 2289 | 49.5 | MHNSNTSKKMKLQWFLLFLISFAEAQRETYIIHMDRTDMPRAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDAGLGPVPPSWKGECEVGKNFNSSNCNRKLIGARYFSRGYEAAFGAIDESQESKSPRDDDGHGTHTSTTAAGSPATGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGSDILAAIDKAVEDGVDVLSLSLGGSSPDYYRDNVAIGAFSAAAQGVFVSCSAGNSGPSSGSLSNVAPWITTVGAGTLDRDFPTYVTLGNGKKFIGESLYSGKPLSDSLIPIVYASEASNSSSGSLCLTSTLNPAKVAGKIVVCDRGGNSRIQKGVVVKDAGGVGMILANTDTYGEEQLADAHLLPTAAVGQKAGDAIKNYISSNANPTATISSSTTRLGVKPSPVVAAFSSRGPNFLTPQILKPDLIAPGVNILAGWIGGATPAGSDSDKPHVPFNIISGTSMSCPHISGLAALLKAAHPDWSPDAIRSALMTTAYSTYKNGEAIQDVSKGLPSTPFGIGAGHVNPMAALDPGLVYDTTTNDYFAFLCALNYTSLAIKVITKKDFTCSGNKYRLEDLNYPSFAVPLETPSIRGDENAAPTTIKYIRTLTNKGTPSTYKASVTLKSPSVKIVIEPQTLSFAEANEQKSYTVTFIASPMPSGTESFSRLEWSDGKHIVGSPIAFTWT | 762 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 3224994 | 3227282 | - | CmoCh12G005260.1 | Cmo12g00526 | 393214 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00526 | 762 | SUPERFAMILY | PA domain | 388 | 470 | IPR046450 | - | |
Cmo12g00526 | 762 | Pfam | Peptidase inhibitor I9 | 29 | 104 | IPR010259 | - | |
Cmo12g00526 | 762 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 19 | 760 | IPR045051 | - | |
Cmo12g00526 | 762 | CDD | Peptidases_S8_3 | 101 | 573 | IPR034197 | - | |
Cmo12g00526 | 762 | Pfam | PA domain | 379 | 454 | IPR003137 | - | |
Cmo12g00526 | 762 | Gene3D | Peptidase S8/S53 domain | 130 | 620 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo12g00526 | 762 | Pfam | Fibronectin type-III domain | 653 | 758 | IPR041469 | - | |
Cmo12g00526 | 762 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.7 | 19 | 760 | - | - | |
Cmo12g00526 | 762 | MobiDBLite | consensus disorder prediction | 194 | 220 | - | - | |
Cmo12g00526 | 762 | PRINTS | Subtilisin serine protease family (S8) signature | 205 | 218 | IPR015500 | - | |
Cmo12g00526 | 762 | PRINTS | Subtilisin serine protease family (S8) signature | 127 | 146 | IPR015500 | - | |
Cmo12g00526 | 762 | PRINTS | Subtilisin serine protease family (S8) signature | 536 | 552 | IPR015500 | - | |
Cmo12g00526 | 762 | Pfam | Subtilase family | 130 | 583 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo12g00526 | 762 | CDD | PA_subtilisin_like | 341 | 468 | - | - | |
Cmo12g00526 | 762 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 104 | IPR037045 | - | |
Cmo12g00526 | 762 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 100 | 607 | - | - | |
Cmo12g00526 | 762 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 537 | 547 | IPR023828 | - | |
Cmo12g00526 | 762 | SUPERFAMILY | Subtilisin-like | 103 | 611 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo12g00526 | 762 | Gene3D | - | 335 | 475 | - | - | |
Cmo12g00526 | 762 | Gene3D | - | 624 | 761 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g00151 | Cmo12g00526 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00775 | Cmo-Chr8:4887730 | Cmo12g00526 | Cmo-Chr12:3224994 | 0 | dispersed | |
Cmo12g00526 | Cmo-Chr12:3224994 | Cmo16g00173 | Cmo-Chr16:786400 | 0 | dispersed | |
Cmo12g00526 | Cmo-Chr12:3224994 | Cmo03g00970 | Cmo-Chr3:7281657 | 0 | wgd | |
Cmo12g00526 | Cmo-Chr12:3224994 | Cmo05g00151 | Cmo-Chr5:663324 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00526 | - | - | csv:101207099 | 1241.1 |