Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00543 ATGGCGAAAGCACTCTACTGCCCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACTCCAGTAGTCCTAGGCGAACAGAATTTGGAAGCTGTAGCTGGGTGCAACTCCACTCTCGCTGTCAGTGAAGCCGCCCATTGGAAAATGGAGGACGCCTTTTCCAGATCTATCTCTGAGGTCTTGGGATTTTTTGGGGTTGACCCATCACAAGGTCTCACAGACGATCAGGTTTTGCATCATGCTAGAGTTTATGGAAAAAATGGTACGTTTTCTGACCCTGGTTCTAGACCGTCAGTCATTTCTATCTCCAACCAGTTTCCTCCTTTTGAAGTAGCAATTCAACTTACCCTTAAGCCTGAGCAAGAAATAGCTATTCAATTGAAGTTTACTTTGGTGATTTGGTTCCCCTGGATGGAAAGAGGGGCCCCATTTTGGAAACTGATTTTGAAGCAGTTTGATGATTTACTAGTGAAGATATTAATTGTTGCAGCAGTTGTTTCTTTCCTATTGGCTTTGATAAATGGAGAGACAGGCATAATAGCATTTTTGGAGCCTTCAGTAATTCTAATGATATTGGCTGCAAATGCAGCAGTAGGAGTGATTACAGAAACAAATGCCGAAAAGGCTCTTGTGGAACTACGGGCATACCAGGCAGATATTGCTACTGTGATGAGAAATGGTATTGTCTTCTTTCCAAGTGTTTCTATTTTGTTCTTCAATGCTATTCACCGCAAGGTATCTTTTGCAGGTTGCTTTTCAATACTTCCGGCTACAGAGCTTGTTCCTGGTGATATTGTAGAAGTTGCTGTGGGGTGCAAAATTCCTGCTGATATGCGAATGATTGAGATGCTTAGTAATCAGCTGCGTGTTGATCAAGCAATTCTTACAGGTGAGAGCTGCTCTGTTGAAAAAGAGCTGGAGGCCACAAGAGCAGTAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGCACCGTGGTGGTTGCTGGCAGGGCACGTGCTGTTGTGGTAGGAGTTGGTGCAAATACTGCTATGGGCAATATACGAGACTCTATATTGCAAACGGATGATGAGGTGACACCATTGAAAAAGAAGCTAGATGAATTTGGTACTTTTCTGGCCAAGGTTATTGCTGGAATTTGTGCACTTGTATGGATAGTGAACATTGGTCACTTTCGAGATCCTTCTCATGGTGGGATTTTGAGTGGTGCAATACACTACTTCAAGATTGCAGTTGCTCTTGCTGTTGCAGCGATTCCTGAAGGACTTCCTGCCGTTGTGACAACGTGTTTGGCTCTTGGCACCAAAAGAATGGCACGTCTGAATGCAATTGTGAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACTACTGTTATATGTAGTGACAAGACTGGAACTTTGACTACGAATATGATGTCCGTCTCAAAGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCTGAGTACAATATCAGCGGTACAACATACGCTCCTGATGGTACTATTTTTGACAGCACTGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACACATGGCAATGGGCTCTGCCCTCTGCAACGAGTCTACTTTGCAGTATAATCCAGATAAGGGGAACTACGAAAAAATTGGTGAATCAACTGAAGTAGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCAATGCCTTTTGCTCTAAATATGCTAAGCAAGCATGAGCGCGCATCCTATTGTAACCACCATTGGGAGAACCAGTTTAAAAAGATGGACAACTTTTCAGGTTGTTGTTTTGGTCATGTTGCTTGCTTATCAAAAGAAACTTTGCAGATTTCTGTATTGGAATTTTCTCGTGATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATCCTTTTCTCCAAAGGTGCTCCTGAGAGCATTATTTCGAGATGCTCAAGTGTCCTTTGCAATGAAGATGGTTCTACCAGTGTTTTAACTTCTAGTATTCGTGCTGAACTGGAAGCAAGATTTCAAAGTTTTGCAGGAAATGAAATGCTTAGGTGCCTGGCTATAGCAATCAAATTGCTTCCTGTGAGTCAACAGAGTTTATCATTTGATGATGAGCAAGACCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGTATGAATGCTGGCATACGTGTTATAGTCGTAACTGGGGACAACAAGTCAACTGCTGAATCACTCTGCCGCAAGATTGGTGCTTTTGACCATTTGGTAGATCTAGCTGATCATTCTTTTACTGCTTCTGAATTTGAAGAGCTACCTGCAATGCAACAGACAATGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCATAAGCAAATGCTTGTGGAGGCCTTACAACATCAGAATGAAGTGGTTGCTATGACAGGTGATGGTGTCAATGATGCACCTGCACTGAAGAAAGCTGATATTGGTATTGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCATCTGATATGGTCTTAGCTGATGACAATTTTGCTACTATTGTTGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTTTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACTCTTGCCCCTGTGCAACTTCTTTGGGTTAACTTGGTCACTGATGGATTGCCTGCAACTGCAATTGGATTTAATAAGCAAGACTCCGATGTAATGAAATCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGATGGTTGTTCTTTCGTTATTTGGTAATTGGAGCGTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCCGACAGTGGTCCTAAGCTACCTTACGCTGAGTTGGTAAGATTTTATTTGTTGCTGTCTTCCTATGGCATTGTGCAGTTTATTCCTGGTTTATCATATGAAGATAAGCATATGCATATGAGTTTTGATACTTGTTCAACAAGAGCGACAACATACCCTTGCAGTATATTTGAGGATCGGCATCCGTCGACTGTTTCTATGACTGTACTTGTTGTTGTCGAGATGTTCAATGCTTTAAATAATCTAAGCGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCATAACCATGATCCTTCACATGCTTATTATGTATGTGCGACCACTAGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTTTGTACCTTTCGTTTCCTGTAATATTCGCACCCCTTGCCTCATTTTCTGTTGTACAATTTCAGTTTTTCTTATTCCCTCAGGATCATGGGTTGAGGCTTCCATTTAGATTCAGAAGGCATGAGTTGCTTCCAAAGAAGGAATTGCGTGACAAGTAG 3540 42.26 MAKALYCPDTDTERRKLGERMGLDTPVVLGEQNLEAVAGCNSTLAVSEAAHWKMEDAFSRSISEVLGFFGVDPSQGLTDDQVLHHARVYGKNGTFSDPGSRPSVISISNQFPPFEVAIQLTLKPEQEIAIQLKFTLVIWFPWMERGAPFWKLILKQFDDLLVKILIVAAVVSFLLALINGETGIIAFLEPSVILMILAANAAVGVITETNAEKALVELRAYQADIATVMRNGIVFFPSVSILFFNAIHRKVSFAGCFSILPATELVPGDIVEVAVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELEATRAVNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICALVWIVNIGHFRDPSHGGILSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVSKICVVHSVLHGPQLSEYNISGTTYAPDGTIFDSTGVQLEFPAQLPCILHMAMGSALCNESTLQYNPDKGNYEKIGESTEVALRVFAEKVGLPGFTSMPFALNMLSKHERASYCNHHWENQFKKMDNFSGCCFGHVACLSKETLQISVLEFSRDRKMMSILCSRNQSHILFSKGAPESIISRCSSVLCNEDGSTSVLTSSIRAELEARFQSFAGNEMLRCLAIAIKLLPVSQQSLSFDDEQDLTFIGLVGMLDPPREEVRNAMLSCMNAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLADHSFTASEFEELPAMQQTMALQRMALFTRVEPSHKQMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKSKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFIYSDSGPKLPYAELVRFYLLLSSYGIVQFIPGLSYEDKHMHMSFDTCSTRATTYPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVITMILHMLIMYVRPLAVLFSVTPLSWAEWTMVLYLSFPVIFAPLASFSVVQFQFFLFPQDHGLRLPFRFRRHELLPKKELRDK 1179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3304011 3331634 + CmoCh12G005430.1 Cmo12g00543 393231

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00543 1179 SFLD p-type atpase 449 887 IPR044492 -
Cmo12g00543 1179 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 1137 IPR023298 -
Cmo12g00543 1179 PRINTS H+-transporting ATPase (proton pump) signature 866 891 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo12g00543 1179 PRINTS H+-transporting ATPase (proton pump) signature 807 823 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo12g00543 1179 PRINTS H+-transporting ATPase (proton pump) signature 835 851 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo12g00543 1179 Pfam Cation transporting ATPase, C-terminus 919 1137 IPR006068 -
Cmo12g00543 1179 PANTHER CALCIUM-TRANSPORTING ATPASE 105 1137 - -
Cmo12g00543 1179 Gene3D - 465 879 IPR023214 -
Cmo12g00543 1179 PRINTS P-type cation-transporting ATPase superfamily signature 468 482 - -
Cmo12g00543 1179 PRINTS P-type cation-transporting ATPase superfamily signature 296 310 - -
Cmo12g00543 1179 PRINTS P-type cation-transporting ATPase superfamily signature 858 870 - -
Cmo12g00543 1179 PRINTS P-type cation-transporting ATPase superfamily signature 729 740 - -
Cmo12g00543 1179 PRINTS P-type cation-transporting ATPase superfamily signature 751 761 - -
Cmo12g00543 1179 PRINTS P-type cation-transporting ATPase superfamily signature 835 854 - -
Cmo12g00543 1179 Gene3D - 478 736 IPR023299 GO:0000166
Cmo12g00543 1179 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 805 923 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo12g00543 1179 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 261 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo12g00543 1179 Pfam Cation transporter/ATPase, N-terminus 145 172 IPR004014 -
Cmo12g00543 1179 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 262 989 IPR005782 GO:0005388|GO:0006816|GO:0016021
Cmo12g00543 1179 Pfam haloacid dehalogenase-like hydrolase 726 849 - -
Cmo12g00543 1179 ProSitePatterns E1-E2 ATPases phosphorylation site. 470 476 IPR018303 -
Cmo12g00543 1179 Pfam Cation transport ATPase (P-type) 538 668 - -
Cmo12g00543 1179 SUPERFAMILY Calcium ATPase, transduction domain A 251 358 IPR008250 -
Cmo12g00543 1179 Pfam E1-E2 ATPase 259 447 - -
Cmo12g00543 1179 Gene3D - 155 1137 - -
Cmo12g00543 1179 SFLD Haloacid Dehalogenase 449 887 - -
Cmo12g00543 1179 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 105 1137 - -
Cmo12g00543 1179 Gene3D - 145 360 - -
Cmo12g00543 1179 SUPERFAMILY HAD-like 466 938 IPR036412 -
Cmo12g00543 1179 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 475 733 IPR023299 GO:0000166
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00543 K05853 ATP2A; P-type Ca2+ transporter type 2A [EC:7.2.2.10] - csv:101211345 1742.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00604 Cmo-Chr1:3069960 Cmo12g00543 Cmo-Chr12:3304011 0 dispersed
Cmo12g00543 Cmo-Chr12:3304011 Cmo13g00152 Cmo-Chr13:940015 0 dispersed
Cmo12g00543 Cmo-Chr12:3304011 Cmo03g00953 Cmo-Chr3:7164857 8.28E-75 wgd
Cmo12g00543 Cmo-Chr12:3304011 Cmo07g00657 Cmo-Chr7:2953435 3.89E-74 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g628 . . . . . . . . . Cmo12g00543 . . . Car12g00547 . . Cpe07g00522 Bhi04g00445 . . . . . Lcy13g2145 Cla08g01633 Cam08g2135 Cec08g1722 Cco08g1842 Clacu08g1822 . Cre08g1606 . Cone7ag1325 . . . . . Cme03g02114 . . . . . . . . . . . Cma12g00603 . . . . . . . . . . . . . . . . . . . Lsi08g01538 Csa02g01881 Chy03g01604 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo12g00543 . 54 1179 Primary Pumps ATPases(2) AT1G10130 72.0 0.0e+00 1525.0
Cmo02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 80.0 0.0e+00 1315.8
Cmo20g00495 CST 1 735 Primary Pumps ATPases(2) AT2G28520 72.8 0.0e+00 1141.7
Cmo19g00696 . 833 1616 Primary Pumps ATPases(2) AT2G28520 55.2 1.2e-244 843.6
Cmo11g01111 . 10 418 Primary Pumps ATPases(2) AT2G28520 52.6 8.6e-121 432.2
Cmo19g00696 . 829 1621 Primary Pumps ATPases(2) AT2G21410 65.8 9.3e-309 1056.6
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.3 6.3e-297 1017.3
Cmo20g00495 CST 9 749 Primary Pumps ATPases(2) AT2G21410 56.6 7.5e-258 887.5
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT2G21410 57.1 5.9e-247 851.3
Cmo11g01111 . 6 418 Primary Pumps ATPases(2) AT2G21410 69.1 4.4e-165 579.3
Cmo19g00696 . 831 1621 Primary Pumps ATPases(2) AT4G39080 66.4 2.7e-308 1055.0
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.5 2.2e-297 1018.8
Cmo20g00495 CST 9 735 Primary Pumps ATPases(2) AT4G39080 58.3 3.4e-258 888.6
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT4G39080 57.2 9.5e-245 844.0
Cmo11g01111 . 8 418 Primary Pumps ATPases(2) AT4G39080 70.4 1.1e-165 581.3
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 2.7e-38 155.6
Cmo12g00375 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cmo01g01447 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo09g00788 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo05g00294 . 209 366 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo12g00374 . 77 234 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo05g00293 CST 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 7.4e-50 194.5
Cmo01g01447 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo09g00788 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo12g00375 CST 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cmo05g00294 . 210 366 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo12g00374 . 78 234 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo05g00293 CST 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 8.5e-52 200.7
Cmo05g00293 CST 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 4.4e-53 204.5
Cmo01g01447 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo09g00788 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo05g00294 . 208 329 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00374 . 76 197 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00375 CST 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.3e-52 200.7
Cmo01g01544 . 4 180 Primary Pumps ATPases(2) AT2G25610 83.1 1.7e-71 266.5
Cmo12g00266 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.6e-71 264.6
Cmo05g00421 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 7.7e-38 154.1
Cmo01g01544 . 8 180 Primary Pumps ATPases(2) AT4G32530 77.3 7.0e-75 277.7
Cmo12g00266 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.4e-72 267.3
Cmo05g00421 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.6 0.0e+00 1671.0
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.9 0.0e+00 1664.4
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.5 0.0e+00 1671.4
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1664.0
Cmo12g00543 . 54 1179 Primary Pumps ATPases(2) AT1G10130 72.0 0.0e+00 1525.0
Cmo13g00152 . 22 1046 Primary Pumps ATPases(2) AT4G00900 66.1 0.0e+00 1328.2
Cmo01g00604 . 22 1045 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1314.7
Cmo04g02105 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo10g01202 . 28 153 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.9e-269 925.2
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cmo06g00370 CST 2 109 Primary Pumps ATPases(2) AT3G01390 79.6 4.0e-37 151.4
Cmo14g00199 CST 2 109 Primary Pumps ATPases(2) AT3G01390 78.7 5.2e-37 151.0
Cmo15g00811 . 40 415 Primary Pumps ATPases(2) AT1G12840 83.0 1.3e-180 629.8
Cmo04g02353 . 1 348 Primary Pumps ATPases(2) AT1G12840 76.3 3.3e-160 562.0
Cmo11g02028 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 2.2e-115 412.5
Cmo02g00588 . 1 261 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cmo07g00843 . 3 454 Primary Pumps ATPases(2) AT3G42050 78.8 7.2e-207 717.2
Cmo14g00507 . 3 505 Primary Pumps ATPases(2) AT3G42050 71.6 4.7e-198 688.0
Cmo01g01447 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo09g00788 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo12g00375 CST 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cmo05g00294 . 210 366 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo12g00374 . 78 234 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo05g00293 CST 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 8.5e-52 200.7
Cmo11g01753 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.7 1.1e-269 926.0
Cmo19g00765 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.5 4.3e-269 924.1
Cmo14g00761 . 1 183 Primary Pumps ATPases(2) AT1G64200 75.3 2.2e-67 252.7
Cmo11g01588 . 1 184 Primary Pumps ATPases(2) AT1G64200 73.3 7.1e-66 247.7
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.3 3.1e-267 917.9
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cmo02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 80.0 0.0e+00 1315.8
Cmo20g00495 CST 1 735 Primary Pumps ATPases(2) AT2G28520 72.8 0.0e+00 1141.7
Cmo19g00696 . 833 1616 Primary Pumps ATPases(2) AT2G28520 55.2 1.2e-244 843.6
Cmo11g01111 . 10 418 Primary Pumps ATPases(2) AT2G28520 52.6 8.6e-121 432.2
Cmo11g01055 . 1 353 Primary Pumps ATPases(2) AT3G28715 81.1 9.1e-165 577.0
Cmo14g00761 . 1 229 Primary Pumps ATPases(2) AT4G11150 78.3 3.1e-92 335.5
Cmo11g01588 . 1 211 Primary Pumps ATPases(2) AT4G11150 74.1 1.6e-80 296.6
Cmo17g00614 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.9 0.0e+00 1180.6
Cmo08g00822 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.1 0.0e+00 1171.0
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.9e-269 925.2
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cmo11g01753 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.7 1.1e-269 926.0
Cmo19g00765 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.5 4.3e-269 924.1
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.3 3.1e-267 917.9
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cmo15g00811 . 40 415 Primary Pumps ATPases(2) AT1G12840 83.0 1.3e-180 629.8
Cmo04g02353 . 1 348 Primary Pumps ATPases(2) AT1G12840 76.3 3.3e-160 562.0
Cmo11g02028 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 2.2e-115 412.5
Cmo02g00588 . 1 261 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cmo14g00761 . 1 229 Primary Pumps ATPases(2) AT4G11150 78.3 3.1e-92 335.5
Cmo11g01588 . 1 211 Primary Pumps ATPases(2) AT4G11150 74.1 1.6e-80 296.6
Cmo14g00761 . 1 223 Primary Pumps ATPases(2) AT3G08560 69.5 3.2e-76 282.3
Cmo11g01588 . 1 211 Primary Pumps ATPases(2) AT3G08560 66.2 2.6e-70 262.7
Cmo14g00761 . 1 183 Primary Pumps ATPases(2) AT1G64200 75.3 2.2e-67 252.7
Cmo11g01588 . 1 184 Primary Pumps ATPases(2) AT1G64200 73.3 7.1e-66 247.7
Cmo04g02105 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo10g01202 . 28 153 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo06g00370 CST 2 109 Primary Pumps ATPases(2) AT3G01390 79.6 4.0e-37 151.4
Cmo14g00199 CST 2 109 Primary Pumps ATPases(2) AT3G01390 78.7 5.2e-37 151.0
Cmo07g00843 . 3 454 Primary Pumps ATPases(2) AT3G42050 78.8 7.2e-207 717.2
Cmo14g00507 . 3 505 Primary Pumps ATPases(2) AT3G42050 71.6 4.7e-198 688.0
Cmo02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 80.0 0.0e+00 1315.8
Cmo20g00495 CST 1 735 Primary Pumps ATPases(2) AT2G28520 72.8 0.0e+00 1141.7
Cmo19g00696 . 833 1616 Primary Pumps ATPases(2) AT2G28520 55.2 1.2e-244 843.6
Cmo11g01111 . 10 418 Primary Pumps ATPases(2) AT2G28520 52.6 8.6e-121 432.2
Cmo19g00696 . 829 1621 Primary Pumps ATPases(2) AT2G21410 65.8 9.3e-309 1056.6
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.3 6.3e-297 1017.3
Cmo20g00495 CST 9 749 Primary Pumps ATPases(2) AT2G21410 56.6 7.5e-258 887.5
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT2G21410 57.1 5.9e-247 851.3
Cmo11g01111 . 6 418 Primary Pumps ATPases(2) AT2G21410 69.1 4.4e-165 579.3
Cmo19g00696 . 831 1621 Primary Pumps ATPases(2) AT4G39080 66.4 2.7e-308 1055.0
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.5 2.2e-297 1018.8
Cmo20g00495 CST 9 735 Primary Pumps ATPases(2) AT4G39080 58.3 3.4e-258 888.6
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT4G39080 57.2 9.5e-245 844.0
Cmo11g01111 . 8 418 Primary Pumps ATPases(2) AT4G39080 70.4 1.1e-165 581.3
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 2.7e-38 155.6
Cmo05g00293 CST 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 4.4e-53 204.5
Cmo01g01447 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo09g00788 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo05g00294 . 208 329 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00374 . 76 197 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00375 CST 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.3e-52 200.7
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 7.7e-38 154.1
Cmo12g00375 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cmo01g01447 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo09g00788 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo05g00294 . 209 366 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo12g00374 . 77 234 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo05g00293 CST 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 7.4e-50 194.5
Cmo01g01447 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo09g00788 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo12g00375 CST 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cmo05g00294 . 210 366 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo12g00374 . 78 234 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo05g00293 CST 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 8.5e-52 200.7
Cmo01g01544 . 8 180 Primary Pumps ATPases(2) AT4G32530 77.3 7.0e-75 277.7
Cmo12g00266 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.4e-72 267.3
Cmo05g00421 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cmo01g01544 . 4 180 Primary Pumps ATPases(2) AT2G25610 83.1 1.7e-71 266.5
Cmo12g00266 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.6e-71 264.6
Cmo05g00421 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cmo11g01055 . 1 353 Primary Pumps ATPases(2) AT3G28710 83.3 7.8e-172 600.5
Cmo11g01055 . 1 353 Primary Pumps ATPases(2) AT3G28715 81.1 9.1e-165 577.0
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.6 0.0e+00 1671.0
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.9 0.0e+00 1664.4
Cmo13g00152 . 22 1046 Primary Pumps ATPases(2) AT4G00900 66.1 0.0e+00 1328.2
Cmo01g00604 . 22 1045 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1314.7
Cmo12g00543 . 54 1179 Primary Pumps ATPases(2) AT1G10130 72.0 0.0e+00 1525.0
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.5 0.0e+00 1671.4
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1664.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010690 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo12g00543 Cmo_Chr12 FPKM 7.826087 7.422649 56.4813 50.441734 26.538244 33.281292 23.60475 0.776177 1.40736 0.851516